Haliotis rubra (blacklip abalone): 124254012
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Entry
124254012 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 2-alpha-like
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrj03032
]
124254012
03036 Chromosome and associated proteins [BR:
hrj03036
]
124254012
Enzymes [BR:
hrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
124254012
DNA replication proteins [BR:
hrj03032
]
Eukaryotic type
DNA Topoisomerases
124254012
Chromosome and associated proteins [BR:
hrj03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
124254012
Centrosome formation proteins
Centriole proteins
124254012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
DTHCT
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
124254012
NCBI-ProteinID:
XP_046543830
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MADEAAANELRWTTLFDNMQAKAKAAMEKNKPKSKAADAGGRDFAPEMMEMAAENQGKKG
SNKRLSVERIYQKKSQLEHILLRPDSYVGSVEAVTQLMWVYDEVNDSMVQREITFVPGLY
KIFDEIMVNAADNKQRDAGMNCLKIDIDAENNKIRIWNNGKGIPVIEHKTEKMYVPTMIF
GHLLTSSNYDDSEKKVTGGRNGYGAKLCNIFSKKFIVETSCNEYKRGFKQTWTENMTKTK
EPTITDARESDFTCITFFPDLEKFKMQSLDADTVALFTRRAYDVAASCKGVRVVLNGKRV
PVKNFKDYIDLFIKDKSDEAGAPLKIVYEQPNPRWEVAITLSDKGFQQASFVNSIATTKG
GRHVDYVTDQVVSKIIEIVKKKNKGGVNIKPFQIKNHLWVFVNCLIENPTFDSQTKENMT
LQAKSFGSKCQMSENFIKQSSKCGIVESVLSWMKFKAQAQLNKKCHSSKHSKLKGIPKLD
DVNDAGTKNSKDCTLILTEGDSAKTLAVAGLGVIGRDRYGVFPLRGKVLNVREATHKQIM
DNAEINNVIKIMGLQFKEKYESMDAINRLRYGKIMIMTDQDQDGSHIKGLLINFVHHFWP
NLLKFNVIEEFITPIVKVTKSKQEKSFYSLPEFEEWKRETDNWHTWKIKYYKGLGTSTSK
EAKEYFSDMERHRIPFKYVGSEDDASINLAFSKKKIEERKEWLTNWMEERKRRTDMGLPE
LYLYSKDTKKVSFNEFINRELILFSNMDNVRSIPSLVDGLKPGQRKVLFTCFKRNLVKEI
KVAQLAGSVSEQSAYHHGEVSLMGTIINLAQNFVGSNNLNLLQPIGQFGTRIHGGKDAAS
PRYIFTALSPLARLLFSAHDDPLLKAQFDDNLKIEPEWYCPIIPTVLCNGADGIGTGWST
RIPNYDVREVVANVKRMIDGLEPRNMLPSYKNYRGIIEEIGEGRCLVSGEVAIIDDQTIE
ITELPIKTWTQNYKEDVLEPLLHGTDKTQPLITDYKEYHTDTTVKFLVKMSSEKLAQSEE
AGLHKVFKLQNQMSTSSMVLFDHNGCIKRYSNSVDILKEFFDIRMEMYKRRKDYLEGMLA
AESLRLDNIARFIIEKIEGTIVIENKPKKEIIQVLVRRGYDSDPVKAWKEAQNKGKPNTR
GEAQEDDDSDSDVSSGPDFNYILSMPLWNLTKEKKDELCKQRDAKAHELEKLRRKSPSDM
WEEDLEAFLQSLDAVEEQERLDEEVSKNVKPKAKLGKTGKARRMPIQETMPSPMGRRVVP
RVDSAMKIKATKDAAKKSRMKERKELKLEDDDIDIKMEEDAEPKSLAERLGATKIKKTAA
SRAPAGENTAKARKPKNSSPGTPSKKKKGGKKKNPWSESSASEMSDMDSDVDNDEGESFI
VIPRDRGPRRAAAVKVKFEMSDEEQIHSDSGDDNVVMNGASEPVAARRPSPIISDDDDDD
DDDSFKPTESTVFGQSHRAPERAKESPLITADFSDSDDDKANLQPSALKWGTSTNSRPMV
IDSDDDDDDKDDIFPPKPKEPVAKKPKAAAKPRAPKKDKNQPSVESLFDKVMSKSAASKA
KSKSKILTISSSEDESVFPAVEKDKADGEKKPKKPRKKKDPDSDDKPKKKRAAVPKRSKM
TSDEEMDDFMPKKRSKTSKKKKDSSDEEDFDLDEDEVFPSAPRTTTGRARSSVKYTFDSD
EDSNF
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaggcagcagcaaacgagctgagatggactaccctgtttgacaatatgcag
gccaaagctaaggctgctatggagaagaacaagccgaagtctaaagctgctgatgctggg
ggaagggatttcgccccagagatgatggagatggcagctgagaatcaggggaagaagggg
agcaacaagagactgtctgttgagcgaatctatcaaaagaaatctcagctcgaacatatt
ctgctgcgtccagactcgtatgtcggttctgttgaagctgtcacgcagcttatgtgggtt
tatgatgaagtgaatgacagtatggtccaaagggaaatcacatttgtaccaggactgtac
aagatctttgatgaaatcatggtgaatgctgctgataataaacagagggatgcaggcatg
aactgtctgaagatagacattgatgcagaaaacaacaaaatcagaatttggaacaatggg
aaaggtattcctgtgattgagcataagaccgagaagatgtatgtccccaccatgatcttt
ggtcatctcctgacctccagtaactatgacgattctgagaagaaagtcacaggtggccgt
aatggttatggtgccaagttgtgcaatattttcagcaagaaattcattgttgagacatct
tgtaatgaatacaagagaggtttcaaacagacatggacagagaacatgacaaaaacaaag
gaaccaacaattactgatgccagagaatctgacttcacatgcatcacgttcttcccagac
ttggagaagttcaagatgcagagtttagatgctgacactgttgctctcttcaccagacgg
gcctatgatgtggctgcctcctgcaagggggtcagggttgtgctcaacggaaaacgagta
ccggtgaagaacttcaaggactacattgacctgttcatcaaggacaagtcagatgaagca
ggagcccctctaaagatagtttatgaacaacccaatcccagatgggaagttgccatcact
ctcagtgacaagggcttccaacaggccagttttgtcaacagtattgctacaacaaagggt
ggtcgacatgtagattatgtcactgatcaagttgtgtcaaaaatcattgaaatcgtcaaa
aagaaaaacaaaggcggagtcaacatcaaaccattccagatcaagaaccacctgtgggtg
tttgtgaactgcctgatagaaaaccctacatttgactcccagacaaaagagaacatgaca
ttacaagctaaaagctttggctcaaagtgccagatgagtgaaaactttatcaaacagtcc
agtaagtgcggtattgtggagagtgtcctcagctggatgaagttcaaggctcaagctcag
ctcaacaagaagtgccactcctccaaacactccaaactgaaaggcatccccaaactcgat
gacgttaatgatgccggcaccaagaattctaaagattgtactctcattctcactgaggga
gactcagccaaaaccttggctgtagctggcctcggtgtgattgggagagacagatatggg
gtgttccccttgaggggtaaagtcctgaatgtaagggaggccactcacaaacagatcatg
gacaatgctgagatcaacaacgtgattaaaatcatgggcttgcagttcaaggagaagtac
gaaagcatggatgccatcaaccgtctgcgatacggcaagatcatgattatgacagatcag
gatcaagacggttctcacataaagggccttcttattaactttgtacatcacttctggccc
aacctcctcaagttcaatgtcatcgaggagtttatcacacctattgtcaaggttacaaaa
agcaaacaggagaaatctttctacagtttgcccgagtttgaggagtggaaaagggagact
gacaactggcacacctggaagataaagtactacaaaggtttgggaacctccacatcgaag
gaggcgaaggaatacttcagtgacatggagcgtcatcggatcccgttcaagtacgttggg
tcagaggacgatgcttctatcaacctggcattcagcaagaagaagatagaggagaggaag
gaatggctgaccaattggatggaggagagaaagcgccgaacagacatgggattacctgag
ttgtacctgtatagcaaggacaccaagaaagttagcttcaatgagttcatcaaccgggaa
ctgattctcttcagcaacatggacaatgtgcgctccatcccgtcccttgtggatggcctg
aagcctggacagaggaaggttctgttcacttgtttcaagaggaacttggtgaaggaaatc
aaagtagctcaacttgccggctcggtttctgaacaatctgcctatcaccatggagaggta
tcactcatgggcacaatcatcaacttagctcaaaactttgtgggttcaaacaacctgaat
ctgttgcaacccattggtcagttcggtacccgcatccatggcggcaaggatgctgccagc
ccccgttacatcttcactgcgctcagtcctttggctcgcctgctattcagcgctcacgat
gacccgttgttgaaggctcagtttgatgacaacctgaagatcgaacctgagtggtactgt
ccgatcattcccaccgttctctgtaacggagcagatggtatcggaacaggatggagcacc
aggatccctaattacgatgttcgagaggttgttgccaatgtgaagagaatgattgatggc
ctggaaccaaggaacatgttgccgtcctacaagaactacagaggaattattgaagaaatt
ggtgaaggccgttgcttagtttccggggaagtagctattatagatgaccaaacaatagag
attactgagctgccaatcaaaacatggacccagaactacaaggaggatgttctggagccc
ctcctgcacggcacggacaagacacaaccgttgatcacagactacaaggagtaccacact
gacaccacagtgaagtttctggtcaaaatgtcctctgagaagctggcacagtctgaggaa
gcagggcttcacaaggtgttcaaactgcagaatcagatgtccaccagttctatggtgttg
tttgatcacaacggttgtattaaaagatactccaactctgttgacattctcaaagaattc
tttgacattcgaatggaaatgtacaaaaggagaaaagattacctcgaggggatgttggct
gcagagtctcttcggctggacaacattgcacgattcatcattgaaaaaatcgagggaacc
attgttattgaaaacaaacctaagaaggaaattatccaggtgctggtgaggcgaggctac
gactccgacccagtcaaggcatggaaggaagctcagaacaagggcaagccaaacaccaga
ggggaagctcaggaagacgacgattcggattctgacgtctcctccggccctgacttcaac
tacattctcagcatgccgctgtggaacctgacaaaggagaagaaggatgagctctgcaag
cagcgggatgccaaggcccatgagttggagaagctgagaaggaagtctccatcagatatg
tgggaggaagatctcgaggctttcctgcagagtttagatgctgtggaggaacaagaaagg
ttggatgaagaggtttcaaagaacgtcaaacccaaagcaaagcttggcaagacaggcaag
gcccgcaggatgccaattcaagagacaatgccatctcccatggggcgccgtgttgtgccg
agggttgattcagcaatgaagataaaggccactaaggatgctgccaagaagagtagaatg
aaggagaggaaggagctgaagctggaggatgatgacatagacatcaagatggaggaggat
gcggagcccaagagtctggcagagagacttggtgccaccaagataaagaagacggcagca
tcgcgggctccagcaggagaaaacacagcaaaagctcgcaaacccaagaacagttcccca
ggaactccgagcaagaagaagaagggtgggaaaaagaagaacccttggtctgaatcttct
gcatcagagatgagtgatatggacagtgatgtggacaatgatgaaggcgaaagcttcatc
gtgataccaagggaccgtggacccagacgtgcagcagctgtcaaggtgaagttcgagatg
agtgatgaggaacagatccacagtgatagtggtgatgacaatgttgtgatgaacggggcc
agtgaacctgtagctgcacggagaccgtccccaatcatttcagatgacgatgacgacgat
gatgatgacagtttcaagcccacagagtcaaccgtctttgggcaatcccacagagcaccg
gagcgtgcaaaagaaagccctctaataacagccgacttctcggacagtgatgacgacaag
gccaacctccagccatcagctcttaagtggggcacctcaacaaattcaagacctatggta
atagacagtgatgacgacgacgacgacaaggatgacatatttccaccaaagccaaaagaa
cctgttgctaagaaacccaaggctgccgctaagcccagagctcctaagaaagacaagaac
cagcctagtgtagagagtctgtttgataaagtcatgtccaaaagtgcagcatcaaaagca
aagagtaaatcgaagatactgacaataagcagctcggaggatgaaagtgtcttccccgca
gtggagaaagacaaggctgatggagagaagaaaccaaagaagccaaggaagaagaaagac
cctgacagtgacgacaagccaaagaagaagagagcggcagtacctaaacgttcaaagatg
acttctgatgaagaaatggatgattttatgcctaagaaaaggtctaagacgtcaaagaaa
aagaaggattccagtgatgaagaagacttcgacctggatgaagatgaagttttcccaagt
gcaccaagaacaactacaggccgtgcacggagttccgtgaaatacacatttgatagtgat
gaagacagtaatttctaa
DBGET
integrated database retrieval system
