Haliotis rubra (blacklip abalone): 124255515
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Entry
124255515 CDS
T07967
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124255515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124255515
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124255515
mRNA degradation factors
5'-3' decay
Lsm complex
124255515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SPT2_N
RP853
Motif
Other DBs
NCBI-GeneID:
124255515
NCBI-ProteinID:
XP_046545409
LinkDB
All DBs
Position
Unknown
AA seq
134 aa
AA seq
DB search
MNYLPGTASLIQEIDKKLLVVLRDGRTLIGFLRSIDQFANLVLHRTIERIHVGKKFGDIP
RGIFIVRGENVVLCGEIDLENENNLPLEQVSIDEILEMQREEQLQKQQEEEKKKKALMER
GLQPNDHSVMDEFF
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgaattatcttccaggaactgcaagtttaattcaggagatagataagaagcttctggtg
gtattacgagatgggagaactttgatagggtttctgcggagcattgatcaatttgcaaac
ctcgtcctgcaccgaacaatcgagagaattcatgtgggaaagaagtttggcgacattcca
agaggcatcttcatcgtaagaggggagaatgtcgtgctatgtggggaaattgacctggag
aatgagaacaacctacccctggagcaggtgtcaatagatgaaatccttgagatgcagaga
gaagaacagctgcagaagcagcaagaggaggagaagaagaagaaggcgctgatggaaaga
ggtctgcaacccaacgaccattccgttatggacgagttcttctga
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