Haliotis rubra (blacklip abalone): 124255738
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Entry
124255738 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124255738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrj03400
]
124255738
DNA repair and recombination proteins [BR:
hrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
124255738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
124255738
NCBI-ProteinID:
XP_046545599
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MALLPKQELQLDTAQEQGFLSFFRKLPEKSSTTLRVFDRTEYYTVHGQDAVFVAKDVYKT
TGVVKHLGSGSNKVESVVLSKMNFESLVRDLLLVRQYRVEVYCNKGASKNNDWSLVFKAS
PGNLTQFEDILFGNNEMSASSGAVGVKLGTDNGQRVVGVGFTDVTQRKFTVSEFSDNDQF
SNLEALIVQLGPKECVVMAGETTGEGGRLRQVLERSGLLLTERKRADFSSKDIVQDLNRL
LKVKKGEQPNSSTLNELDKTHGTAALSAVIRYLELLSDEGNFGQYTVGSFELGQYMRLDS
AAVRALNLMPSPSEGGNKNQSVLGLLNKCRTAQGQRLLGQWVKQPLMDVNRIEERLNVVE
AVVEDAELRQTLQEDQLRRMPDFQRLAKKFQRQKATLQDCYRVYQAIDKMPQLLETLERH
SGTHQPLLMELFTNPLKELLMDFSKFQEMVETTLDLQQVEHHEYLIKPDFDENLTALPEK
IDDLEGQIKGQMNRVARDLGLEANKTLKLESNSQLGYFFRVTRKDEKSLRNNKNYRTIDT
NKNGVRFHNTAVRQLNEEYLQAKEEYTEQQKSVVTEIINIAAGYVDPMLLINDNIAQLDV
LVSFAHVACSAPIPYVRPTIHAKGGAALRLMEARHPCLEMQDDVSYIPNDVSFVRDKEMF
HIITGPNMGGKSTYIRSIGVIVLMAQLGCFVPCEEAEISVVDSILARVGAGDSQLKGVST
FMAEMLETASILRSASENSLIIIDELGRGTSTYDGFGLAWAISENIATKIKAFCLFATHF
HELTALADVVPTVTNRHVTALTTNDTLTLLYRVKSGVCDQSFGIHVAELAHFPKHVIEFA
KTKASELEDYQSISLTGTDLDGDSEPAVKKRKCAKQDGEQLIQDFISKVKAIPVSTISDA
EILKEVGKLKAELEAKDNPYITDLLARKQNT
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggctttgctaccgaaacaggagttacagttagacacagcccaagagcagggattcctg
tctttcttcagaaaactgccagagaaatccagtaccacattgcgtgtatttgacaggaca
gaatattacaccgttcatggccaggatgcagtgttcgttgccaaggatgtgtacaagacc
accggggtcgttaagcacctgggttcaggatcaaacaaggtggagtctgtggtcctgagc
aagatgaactttgagtcattggttcgtgacctgctgttggtccggcaatacagagtggaa
gtgtactgcaataagggagcctccaagaacaatgactggtccctggtctttaaggcgtct
ccaggtaacctgacacagtttgaggacatcttgtttggcaacaatgaaatgtcagcttcc
tctggtgccgtgggcgtgaagctgggtacagacaatgggcagcgggttgtgggcgttggc
ttcacagatgtcactcagaggaagttcacagtcagtgagttttctgacaatgaccagttt
tcaaatcttgaggcactgattgttcaactgggccccaaggagtgtgtggtgatggcaggg
gagacaactggagagggaggtcgactgagacaggtgcttgagagaagtgggttacttctc
acagagagaaagagagctgacttctcaagcaaggacattgtacaagacctgaaccgactc
ctgaaggtgaagaagggagaacagccaaacagctcaactctcaatgagcttgacaagaca
cacggtactgcagctctttctgccgtcatacggtacctcgagcttctgtctgacgagggc
aactttggccagtacactgtgggtagttttgagttgggtcagtacatgagactggactct
gcagccgtcagggccctcaacctgatgcccagtcccagtgaaggaggcaacaagaaccag
agtgtactgggtctgctcaataagtgccggacagcccagggtcagcgtctcttgggtcag
tgggtcaagcagcccctcatggacgtcaacagaatagaggaacgtctcaatgtcgtggag
gctgtagttgaggatgcggagctgcggcagacgctgcaggaagatcagctccgtcgcatg
ccagactttcagcgtttggccaagaagttccaacgccagaaggcaacactacaggactgc
taccgagtgtaccaggcgattgacaagatgccgcagttgctggagacgttggagcgccac
tccggcactcatcagccactcctcatggaactcttcactaacccactcaaggagctgctg
atggacttctccaagttccaggagatggtggagacaacactggacctgcagcaagtagag
catcatgagtatctcatcaaacctgacttcgacgagaacctcacagctctccccgagaag
attgatgacttggagggtcagatcaagggacagatgaatagggtggccagagatctgggt
ctggaagctaacaagactctgaaactggagagcaactctcagctgggctacttcttccga
gtgacaaggaaagatgagaagtcgctgcgtaacaacaagaactaccgcactatcgacacc
aacaagaatggtgttcgctttcacaacaccgcagtacgtcaattgaatgaggaatacctg
caagcaaaggaggaatacacggaacaacagaagagcgttgtcacagagatcattaacatc
gcagctggctacgttgatcccatgctgctgatcaacgacaacatcgcacagctggacgtc
ctcgtcagctttgcacacgtcgcctgcagtgcccctatcccttacgtcagaccaactatt
catgcgaaaggtggagctgcactgcggctgatggaggcacgacacccgtgtctagagatg
caggatgatgtgtcgtatatccccaatgatgtctccttcgttagagacaaggaaatgttt
cacatcatcacaggtccgaatatggggggcaagtccacgtatatcagatcgataggtgtc
attgtgttgatggcccagttgggctgcttcgtcccatgtgaggaggcagagatttcagtg
gtggacagtatcctggcccgtgtgggggcgggggacagtcagctaaagggtgtgtccacc
ttcatggcagagatgctggaaactgcctccatactgaggtcagcatctgagaactcacta
ataatcatcgatgaactgggacgtggtacgtcgacatatgatggcttcggtctggcatgg
gcaatctcagagaacattgcaacaaagatcaaggcattctgtttatttgcgactcacttc
catgagttgactgcactggctgatgtcgtcccaactgtaaccaaccgtcatgtgactgcc
ctcaccactaatgacaccctaacactgctgtacagagtcaagtctggtgtgtgtgaccag
agtttcgggatccacgtggcggagttggcacacttccccaagcatgtgatagagtttgcc
aagacgaaggcgagcgagcttgaagactaccagtctatcagcctcaccggcacggaccta
gatggggactcagaaccagctgtcaagaaacgcaagtgtgccaaacaggatggagaacaa
ctcatacaggacttcatcagcaaggtcaaggccattcctgtgtcaaccataagtgatgca
gagatcctgaaggaggtggggaagctgaaggcggagttggaagctaaggacaacccatac
atcacagacctcttggctcggaaacagaatacatag
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