Haliotis rubra (blacklip abalone): 124256738
Help
Entry
124256738 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: polypyrimidine tract-binding protein 1-like
KO
K13218
polypyrimidine tract-binding protein 1
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124256738
03041 Spliceosome [BR:
hrj03041
]
124256738
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
124256738
Spliceosome [BR:
hrj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124256738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_NFXL1
Motif
Other DBs
NCBI-GeneID:
124256738
NCBI-ProteinID:
XP_046546657
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MDGDYLASGTKRGSEELMSHSPMVTNGTGMSPQHAHNSDISNDAKKVKLDQTNNTNAPSR
VIHIRSLPNDVAETDIVQLGLPFGEMSKVLLLKQKNQAFLEFNDEGSAANMVSYYQTTPS
QVRLKPCYVQFSNHKELSIKTDASHAYQNATAQAALQAAQAVIHARGGGNSGAFLESNEC
NQTVLRVIVDNILYPITLDVLHSLFSRFGKVLKIITFTKNNTYQALIQFSDPISAKAAKD
SLDGQNVYNGCDTLKIDYSRLMNLNVKYNNDKSRDYTRPELPTGEVTLETTMQQSMLDYF
APACAPGVMASPFAAAMPGLGGAPLTAYGAPSAAAAAAAHGFGGLQGVNPFSSAMPAMAG
FGPIPGAYGAARLGIPIQAQAGSPVLLVSNLDEQTVTPDALFTLFGVYGDVHRVKILFNK
KDNALIQMAEPSQAQLAITFLDKVKVWGKTIRVAQSKHSVVQMPKEGQPDAGLTKDYVNS
PLHRFKRPGSKNCQNIFPPSAVLHLSNIPKDTEEGEITTKFAEHGAVKAFKFFPKDRKMA
LIQMGSVDEAVMALIAMHNFQMGENSHLRVSFSKSTI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggacggggactatctagcatctggcactaagagaggatcagaagaactgatgtcgcac
agcccgatggtgacgaacggcacagggatgagccctcaacatgctcacaattctgacatc
agtaatgatgccaagaaggtgaagctggaccagacaaacaacacaaatgccccttccagg
gtcatccacatccgcagtctgcccaatgatgtcgcggaaaccgacatcgtacagctcgga
ttaccgtttggagagatgagcaaagtccttctgctcaaacagaaaaatcaggctttcctg
gaattcaatgacgaggggtctgcagccaacatggtgtcctactaccagaccacgccttcc
caagtccgcttgaaaccatgctatgtccagttctccaaccacaaggaactcagtatcaag
acagatgcttcacatgcataccagaatgctacagcacaggcggctttgcaggcagctcaa
gctgtgattcacgcccgcggcggcggcaacagtggtgccttcctcgaatcaaatgagtgt
aatcagacggtgctacgcgtgatcgtggacaacatcctgtaccccatcacacttgacgtg
ctccactctttattctctcgatttggaaaagtcctcaagatcatcactttcaccaagaac
aacacctaccaggccttaattcagttttcagaccccatctcggctaaagcagctaaagat
tcactggatggacagaatgtctacaatggctgtgacacactgaagatcgactactctcgt
ttgatgaatctcaatgtgaagtacaacaatgacaagagccgagactacacgcggcctgaa
ttgcccacaggagaagtgacgttagaaactaccatgcagcagagcatgctggattacttt
gctcccgcctgtgctccgggggtgatggcctctccgttcgccgctgccatgccgggcttg
ggaggtgcccccttaactgcctatggtgccccttcggcagccgcagccgctgcagcacat
gggtttggtggtctgcaaggtgtcaaccctttctcttcggcaatgcctgcaatggctgga
tttggtccaattccaggagcgtatggtgccgcccgtttaggcatccctatccaagctcaa
gccggcagtcctgtactccttgtctccaacctcgatgaacagacggtcacgcccgatgct
ctctttaccctttttggagtgtatggggacgtacatcgggtgaagatcctctttaataag
aaggataatgcactcattcagatggcagaaccaagccaagcacagttagccatcacgttc
ctggacaaggtgaaggtatgggggaagacaatccgggtggctcaatccaagcactccgtc
gtacagatgcccaaggagggacagcctgatgctggtctgacaaaggactacgtcaactcc
ccactccacaggttcaagagaccaggatccaagaactgtcagaacatattcccgccatct
gcagtgctacatttatccaacattccaaaagacacagaggaaggggaaatcactacaaag
tttgccgaacacggagctgttaaagcattcaagtttttcccgaaagacagaaagatggcc
ttaatccagatgggctctgtggacgaggcagtcatggctttaatagctatgcacaacttc
cagatgggagaaaacagccacctgagagtgtccttctcaaaatccacaatttag
DBGET
integrated database retrieval system
