Haliotis rubra (blacklip abalone): 124257144
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Entry
124257144 CDS
T07967
Name
(RefSeq) uncharacterized protein LOC124257144 isoform X1
KO
K06238
collagen type VI alpha
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj04512
ECM-receptor interaction
hrj04518
Integrin signaling
hrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124257144
04518 Integrin signaling
124257144
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124257144
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrj04147
]
124257144
00536 Glycosaminoglycan binding proteins [BR:
hrj00536
]
124257144
Exosome [BR:
hrj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124257144
Glycosaminoglycan binding proteins [BR:
hrj00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124257144
Hyaluronan
Extracellular matrix or blood plasma proteins
124257144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
VWA_CoxE
VWA_3
UPAR_LY6
Motif
Other DBs
NCBI-GeneID:
124257144
NCBI-ProteinID:
XP_046547091
LinkDB
All DBs
Position
Unknown
AA seq
1266 aa
AA seq
DB search
MDSSLLFFVLAFVGLAQLAEGDRVRCLECNRVTKPQDCTKDVICDESEICVSEQYITDLG
HTLYDIGCRLTSSCAATGYKGRQHQSNQMLIGRKRQNIAAHLCIECCDTDLCNKNLCGGT
DNGRLECVHCSGLQNMTYCTQLEICESNEVCYIEKKITDTYGQQYTAGCVKRTQCEAKQV
SKRQYDNVVDLCFNCCNTSVCNIECHRAATPAVTTTLTTTATSTQTTATTPTTTAPTTTT
PTTSKSTHTPRPTSKVTHTPRSTSKATHTPRPTSKVTHTPRPTSKATHTPRPTSKVTHTP
RPTSKATHTPRPTSTSTAKTSPMPSTICPTFPPLATIQPPKILNNVLASLGCSGKNDVVL
LVDNSHSVQDEDAHHFEMFARVLSATLDISPDKTRLGYTYFGQNISDLIHLKFGGNRDNF
YNRLAHAEARYGTSGGKASLGEGLRHIDRVVFSPRNERQGAKKYLVILTKDDLHDMQTAL
SEATALKNRGVEIVLIGIGDFIGLTGDLEKIVTSPHKTHMIIDDSVDDLQYSLEDIFVSR
CRGHTPTVAPDPCGGPKLLNYLGCGAKEDIVLILDHSGSITETDWKKMVEFTHKLVDNFN
VAHDASDIGVMTFNDKLTEIVPLHAYSDKASLLHAMDTGLNRVLVHGDTFTNLALNQTLH
WFHRDKRHDAIKVAIIFTDGGSHKKFETFSTALDLHHNNVTVFVVGIGGEVDLYEQMILA
SDPDAEHMLNVGDYHNLIKYLDYLLAVRCRATTPATTTPTTTAPTTTTPTTSKATHTPRP
TSKSTHTPRPTSKSTHTPRPTSKATHTPRPTSTSTAKTSPMPSTICPTFPPLTTKQPPKI
LNNVLVSLGCSGKNDVVLLVDNSHSVQDEDAHHFEMFARVLSATLDISPDKTRMGYTYFG
QNISDLINLNLGGNQKYLYYRLAYAEARYGTSGGKAYLGAGLRHIDRVAFSPRNERQGAK
KYLVILTKDDLHDMQTALSEATALKNRGVEIIFIGIGDFKGLTGDLEKIVTSPHKSHMII
DDSVDDLQYSLEDIFVSRCRGLTPTVAPDPCGGPKLLNYLGCGAKEDIVLILDHSSSISV
SDWKKMVEFTHKLVDNFNVSHDASDIGVMTFNDQLTDIVHLHAFRNKASLLHTIDTRLNM
VHVTGNTFTHLALNQTLHWFRGDRRHDAVKVAIIFTDGGSNRKFETFSTALDLHHNNVTV
FVVGIGGEIDLYEQMILASDPDAEHMLNVGGYHNLITYLDYLLAVRCRDMAMSSTTVSPS
TTIKRH
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggacagcagtttgttatttttcgttttggcttttgtcggattagctcagcttgctgaa
ggtgaccgagtgcgatgcttggagtgcaatagagtgaccaaaccacaagactgcacaaaa
gatgtgatatgcgacgagagcgagatctgtgtttctgaacaatacatcacagatctcggg
cacactctgtacgacatcggctgtaggctgacttcttcgtgtgctgcaactggctataag
ggacgacaacaccagtctaaccagatgctgattggtcggaagcggcagaacatcgctgct
cacctgtgtatagagtgttgtgatacagacctgtgcaacaaaaacctgtgtgggggaaca
gataacgggagactggaatgcgtccactgctcgggtctgcagaacatgacctactgtaca
cagctggaaatctgtgaatcaaacgaggtgtgttacatcgagaagaagatcacagacacc
tacgggcagcagtatacggcaggctgcgttaagaggacgcaatgtgaagcaaaacaagtc
tctaagcgacagtatgacaacgtggtggacctttgcttcaactgctgcaatacgtcggtc
tgcaacatcgaatgtcatagagctgcaacaccagcagtaacaacaacgttaacgacaact
gctacttctacccaaactacagcaactacgccaactacaacagcgcctactacaaccact
cccacaacgtctaagtcaacccatacgccaaggcctacgtccaaggttacccatacgcca
aggtctacgtccaaggctacccatacgccaaggcctacgtccaaggttacccatacgcca
aggcctacgtcaaaggctacccatacgccaaggcctacgtccaaggttacccatactcct
aggcctacgtcaaaggctactcatacgccaaggcctacgtctacgtctactgctaagacg
tcgcctatgccgtcaaccatctgcccaacgttcccgccactagcaacaatacaacctccc
aagatcctgaacaacgtccttgcgtcacttggatgcagtggaaagaatgatgtcgtgctg
ctggtggacaactcgcactccgtccaggacgaggacgcgcaccacttcgaaatgtttgcc
agagtgttgtcagccaccttagatattagcccggataagacccggctgggctacacgtat
tttggtcaaaatatctcggaccttatccatttgaaatttggtggtaaccgggacaatttc
tacaatcgtcttgctcacgcagaagcgagatatggtacttcaggtgggaaagcatctctt
ggggaaggacttcgacacatcgacagagtcgtgttttcgccaagaaacgaaaggcaaggc
gcaaagaagtaccttgtgatactgacgaaagatgacttacatgacatgcagactgcattg
tcagaagctactgcactgaagaacagaggagtggagatagtcctcattggaattggggat
tttataggtttgactggagacctggaaaagatagtgacgagtccacacaagactcacatg
atcattgacgattccgttgacgaccttcaatattccctggaggatatcttcgtgagtcgt
tgccgaggtcatacaccaaccgtggctccagatccatgtggcgggcccaagcttctcaac
taccttggttgtggagccaaagaggacatcgtactgatcctagaccattctggcagcatc
actgaaactgactggaagaagatggtggagtttactcacaagttggtggacaacttcaac
gtagcccacgacgcatcagacatcggcgtgatgaccttcaacgacaaactaacggagatc
gtcccccttcacgcttacagcgacaaagccagtctgttgcatgctatggatacagggtta
aatagggtcctggtacatggagacacttttaccaatctggctttaaaccaaactctccat
tggtttcatagggacaagagacatgacgctataaaggttgcaatcattttcactgatggc
ggttctcacaagaagtttgaaacgttctccactgccctggatctccatcataacaacgtc
accgtgtttgttgtgggtatcggcggggaggttgacctttacgagcagatgatactggcc
tctgacccggatgcagaacatatgctgaacgtcggggattaccataacctgattaagtac
ctggactatctgctggctgtcagatgtagagctacaacaccagctacaactacgccaacg
acaactgcgcctactacaaccactcccacaacgtcaaaagctacccatacgccaaggcct
acgtccaagtctacccatacgccaaggcctacgtccaagtctacccatactcctaggcct
acgtcaaaggctacccatactccaaggcctacgtctacgtctactgctaagacgtcgcct
atgccgtcaaccatctgcccaacgttcccgccactaacaacaaaacaacctcccaagatc
ctgaacaacgtcctcgtttcccttggatgcagtggaaagaatgatgtcgtgctgctggtg
gacaactcgcactccgtccaggacgaggacgcgcaccacttcgaaatgtttgccagagtg
ttgtcagccaccttagatattagcccggataagacccggatgggctacacgtattttggt
caaaatatctcggaccttatcaatttgaaccttggtggtaaccagaaatatctctactat
cgtcttgcttacgcagaagcgagatatggtacttcaggtgggaaagcatatctgggggca
ggacttcgacacatcgacagagtcgcgttttcgccaagaaacgaaaggcaaggcgcaaag
aagtaccttgtgatactgacgaaagatgacttacatgacatgcagactgcattgtcagaa
gctactgcattgaagaacagaggagtggagataatcttcattggaattggggattttaaa
ggtttgactggagacctggaaaagatagtgacgagtccacacaaatctcacatgataatt
gacgattccgttgacgaccttcaatattccctggaggatatcttcgtgagtcgttgccga
ggtcttacaccaaccgtggctccagatccatgtggcgggcccaagcttctcaactacctt
ggttgtggagccaaagaggacatcgtactgatcctagaccattccagcagtatcagtgtt
tctgactggaagaagatggtggagtttactcacaagttggtggacaacttcaacgtgtcc
cacgacgcatcagacatcggcgtgatgaccttcaacgaccagctaacggatatcgtccac
ctccacgccttcaggaacaaagccagtctattgcatactatagatacaaggttaaatatg
gttcacgtaactggaaacactttcacccatctggctttgaaccaaactctccactggttt
cgtggcgaccggagacatgacgctgtaaaggttgcaatcatcttcactgatggcggttct
aacaggaagtttgaaacgttctccactgccctggatctccatcataacaacgtcaccgtg
tttgttgtgggcatcggcggggagattgacctttacgagcagatgatactggcctctgac
ccggatgcagaacatatgctgaacgtggggggttaccataacctgattacctacctcgac
tatctgctggctgtcagatgtagagatatggccatgtcttcaacaactgtcagtccatcc
acaactatcaaacgacactga
DBGET
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