Haliotis rubra (blacklip abalone): 124257367
Help
Entry
124257367 CDS
T07967
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124257367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrj03021
]
124257367
03036 Chromosome and associated proteins [BR:
hrj03036
]
124257367
Transcription machinery [BR:
hrj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124257367
Coactivators
SAGA/TFTC/STAGA complex
124257367
Chromosome and associated proteins [BR:
hrj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
124257367
STAGA complex
124257367
TFTC complex
124257367
SAGA complex
124257367
SLIK complex
124257367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
TFIID_NTD2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
ANAPC4_WD40
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
PROPPIN
WD_LRWD1
WDR54
Mala_s_1-like
WD40_like
USH1C_N
Motif
Other DBs
NCBI-GeneID:
124257367
NCBI-ProteinID:
XP_046547367
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MWDVMSTPDIPHFLKMKRIKHEQIQSTVSHYLKRRHFMDAEVSGKRECGATQELSEVALH
GSVNCNGNTENVLAYSSISGDATACDQQFTRLKHFVLDAVEPYQGELRGLLFPMFVHVYL
ELLCNGHKTPAHKFHDRHVSLLREDDSHKALIKALRKMDTKLDVANSQEVGNFRDNKFSI
SLTEACLNYLMRHLKMEDNMIMLQIFNQFFHVEVKHKELSNMELTDTHKVADDHTNKQST
TTTASSDISMSTLTQSIQKVRDGPPCMSSICVYTFLNAYQGLCSTCVSPDGESLAAGFED
STVSLWSLSPGHIHSEASDGDPSKIAVAADLLNVEEDKAALRASCDLETLTLMGSALIYL
SPILLSCYIEDTTVRLWDLRTHTNRVCYQGHNYPVWDIDASATAGYFASSSQDRTAKLWC
TERTYPLRSFIGHTFDIDCVKFHPNGNYLATGSGDKTVRLWSIQSGRTVRLFQGHRGSVM
CLAFSPDGRLLASAGEDRRIRVWDLSTGHLYKELRGHSDTVYSLCFSRNSSLLASGGLDS
CIWVWDVGKTTDKDNTESTTSPELLSAFPTKSVSVIYLHFSKHNVLQAAGTNL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtgggatgttatgtcaacgccagatattccacatttccttaagatgaaaagaatcaaa
catgagcagatacagtctactgtctctcattatttaaagaggaggcacttcatggatgca
gaggttagtgggaaacgggagtgtggagctacacaagagcttagtgaggtggccctccat
gggagcgtcaactgcaacggcaacaccgagaatgtcctcgcctacagcagcatttctgga
gatgcaacagcttgtgatcagcagttcacaaggttgaagcattttgtactggatgctgta
gaaccataccaaggagaacttcgaggtcttctcttcccaatgtttgtccatgtctacctg
gaacttctctgcaatggacataagactccagcccataagtttcatgatcgacatgtttca
ctgctgagagaggatgacagtcacaaggcactgatcaaagcgctgcggaagatggacact
aaactagatgtggccaactcacaagaggtcgggaatttcagagataacaagttcagcatc
tccttgactgaagcctgtctgaattacttaatgaggcacctcaagatggaggacaacatg
ataatgctacagatcttcaaccaattcttccatgtggaagtgaaacataaagagttaagc
aacatggaactgactgacactcacaaagtggcggacgaccataccaacaagcagtccacc
acgaccacagcatccagtgatatcagtatgtccaccctcacacagtccatccagaaggtt
cgagatggaccaccgtgtatgtcctccatatgcgtctacacattcctcaatgcttaccaa
ggtttgtgcagtacatgtgtgtcccctgatggcgagagtctggcggctgggttcgaggac
tccactgtgtctctgtggagcttgtcacccggacacatccactccgaggccagcgatggt
gaccccagcaagatagcagttgcagctgacctcttgaatgtcgaagaggacaaagcagct
ctcagggctagctgtgaccttgagacacttacactgatggggtctgctttgatctaccta
tctcctatactcctgtcctgctacatagaagacaccacagtacgtctgtgggatttgagg
acacacacaaacagggtgtgctaccagggacacaactacccagtgtgggacattgatgcc
agtgctactgcaggctattttgccagcagctctcaggaccgtacagccaagttgtggtgc
acagagaggacatatcccctccgatcgtttattggccacacgttcgacatagattgtgtc
aagttccacccaaatggcaactacctggcaactggatctggcgacaagactgtccgactg
tggagcatacaaagtggccggactgtccgcctgtttcaaggtcataggggatccgttatg
tgccttgccttctcccctgatggcaggctactggcatcagcaggtgaagatcgtcggatc
cgtgtgtgggacctgagcactggtcatttgtacaaggagctgcgcggacactccgacact
gtctactccctctgcttcagccgcaacagctcactgttggcctctggggggctcgactcc
tgtatctgggtgtgggatgtcgggaagaccacagacaaggacaataccgagtctaccacc
tctcctgaacttctcagtgccttccccaccaagtcggtgtctgtcatatacctccacttc
tctaaacacaacgtgcttcaggctgctggaaccaacttatga
DBGET
integrated database retrieval system
