Haliotis rubra (blacklip abalone): 124258948
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Entry
124258948 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03030
DNA replication
hrj03410
Base excision repair
hrj03420
Nucleotide excision repair
hrj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124258948
03410 Base excision repair
124258948
03420 Nucleotide excision repair
124258948
03430 Mismatch repair
124258948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrj03032
]
124258948
03400 DNA repair and recombination proteins [BR:
hrj03400
]
124258948
DNA replication proteins [BR:
hrj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124258948
DNA repair and recombination proteins [BR:
hrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124258948
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
AAA_14
Rad17
BRCT_2
nSTAND3
PTCB-BRCT
RuvB_N
AAA_16
AAA_30
AAA_5
AAA_18
AAA_33
AAA_17
AAA_7
AAA_19
NTPase_1
RNA_helicase
TIP49
Motif
Other DBs
NCBI-GeneID:
124258948
NCBI-ProteinID:
XP_046548976
LinkDB
All DBs
Position
Unknown
AA seq
1078 aa
AA seq
DB search
MKISVLFDVPRYITASTTEEEADAEDVVHKKGKPRSKKTQRIESDSDEEPIPKKNKKKKE
AVVFIDDSDEETDRPKKRSSLDGFVTVTPPKPKQSSAKTPEAKTPISASDFFGSSSVQRS
DRKIAAAKRKQSTERRNSSDVEMHDDDDFSKTLSQLDDEVLPKKVKKESPDKVNGEGDKS
LSRKLSSRMKTLVEDTPEKPSKKSTVIVPDTPKSGKTSPLKKPSPKKSPVRSNMVFTPKK
SPVKTESKKTSPSSPSPSKTSPKSTTSPKEGTPKLVNRASYRAYLHREGPSALGSKEIPE
GADNCLEGLTFVITGVLESLEREDAKSLVEKYGGKVTGSISKKTSYIVVGRDAGESKLNK
ANQFKTHQLDEDGLLDLVRKMPGKKSKYLVKAEEDAKKEKLEKQKLEKRKSEENNNVPHK
KEKHSEELSKKSSKPSPSKSDQSGESLLWVDKYKPTSIRQVIGQQGDXSNAKKLLGWLRQ
WHHNRASGTKPQGKFFGKDDGSGFRAALLSGPPGVGKTTTATLVCQELGFSYIELNASDT
RSKRSLKEFVAEALNNTTLVDFMGPSRADTGGHKHCIIMDEVDGMAGNQDRGGIQASASS
KQLRLLGKAPNSTFALAAEIPCGSVQDLEEVYGTLMQQSLLYRKCRAPGRLTCTCHCSNG
NGSEGLHDVRQSHCGIGSQGAMMSMIYKEGLKIAPPVLNEIILGANQDVRQVIHNLCMWT
ATDKTLTYEQAKKDAKNAEKDYKLSPFDVCRKVFVGGEETAKMTIHDKSDLFFNDYSFTP
LFVQENYTSVIPYSARGNTSRHLSALARAADSICDGDLADRKIRSSQNWNLLPAQAIFSS
VIPGEVMRGSLPHMVQFPQWLGKNSSRNKTDRIMQELRTHMRLQTSGDMKGLNMDYLPVI
RHVMTHPLVQHGGDGVREVIDFMDNYDIIKEDFDNILEITKWPNSSDPLSKLDTKTKAAF
TRTYNKESHVTPYATGVMSKKRRGRAPIAEEDDLMDGEDRAAMAVSSDEDNDDLEADTMI
KKGTSSKTAGKKGGDAAGKKGGDAAGKGKAGGKGKAGAGGKGKAGVGGKGKGKGKGKS
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgaagatatcagtgttgtttgatgtcccaagatatatcacagcaagcacgactgaagag
gaggctgatgccgaggatgttgtacacaagaagggaaaaccgagatccaagaaaacacaa
agaatagaatcagattcggatgaggagccaattccaaagaaaaacaaaaagaagaaggaa
gctgttgtattcattgatgattctgatgaggaaactgatagacccaagaagagatcatca
ttagatggctttgtgacagtaacaccacccaaacctaagcaatctagtgctaaaactcct
gaggcaaagacaccaatctctgcctcggatttcttcggaagtagttctgtgcagaggagt
gatcgcaaaatagcagcagcaaagaggaaacagtcgactgagagaagaaattccagtgat
gtagagatgcatgatgacgatgacttttcgaagactctgtcccagcttgatgacgaagtg
ctacccaagaaagtgaagaaagagtcgcccgataaagtaaatggagaaggagacaagagt
ctgtcaaggaagctgtcaagtcgtatgaagaccttggtggaagacactccagaaaaaccc
agcaagaaatctactgtcattgtgcctgacacacctaaaagtgggaagacttctccactc
aagaagccgtcacccaagaagtcaccagtcagaagcaacatggtcttcacaccaaagaaa
tccccagtgaaaacagaaagcaagaaaacatctccctcgtcacctagtccttcaaagact
tctcccaagtctaccaccagtcccaaggaaggaactcccaagctggtgaaccgagcaagc
taccgggcgtacctccaccgagaaggtccatcagccctcggctccaaggaaatcccagag
ggagctgataactgtctggagggcctgacatttgtcattaccggggtactggagtcactg
gaacgggaggacgccaagagtcttgtagagaagtatggcggcaaggtcactggttctata
agcaagaaaaccagctacattgtagttgggagggatgctggagagagcaaactaaataag
gcgaatcagttcaagacacatcagcttgacgaggatggtctcctggatctggttcgaaag
atgcctggaaaaaagtccaagtacctggtgaaagcagaagaagatgccaagaaggaaaaa
ctagaaaaacaaaaactggagaagagaaaatcagaagaaaacaacaatgttccacataaa
aaagaaaaacattctgaggaattaagcaaaaaatcttcaaaaccatcaccatccaaatct
gaccaatcaggagagtcgttactgtgggtggacaaatacaaaccaaccagtatcaggcag
gtcattggtcaacaaggagacnagagcaatgccaagaagcttctcggttggctgcggcag
tggcatcataacagagccagtggaaccaagccgcaaggtaaattctttgggaaagatgat
gggtctggtttcagggcagctcttctctctgggcccccgggtgttgggaagaccacaacg
gcaacacttgtatgtcaggaacttgggttctcctatattgagctgaatgcatcagacaca
cggtcaaaaagaagcttgaaggaatttgtggcagaggcactgaacaacacaacactggtg
gacttcatgggtccgtccagggctgacacaggaggccacaagcactgcatcatcatggac
gaggtggatggcatggctggtaaccaggaccggggtggcatccaggcttcggcttcctcg
aagcagctccggctgctcggcaaagcgcctaactccacctttgccctcgccgcggaaatc
ccctgcggcagcgtgcaggacctcgaggaggtctacggaacgctgatgcagcagtccttg
ttgtaccgtaagtgccgtgcgccaggcagacttacatgtacatgtcactgtagcaatggt
aacggaagtgaaggtctgcatgatgttcgtcagtctcactgtggtattggttcacaggga
gccatgatgtccatgatctacaaagaggggttgaagatcgctccacctgttcttaacgag
atcatcttgggagccaatcaggatgtccgacaggtgatccataacctgtgtatgtggacg
gccacagacaagacactcacctatgaacaggccaagaaagacgccaagaatgcagagaag
gactacaagctgagtccatttgatgtgtgtcggaaggtgtttgttggaggagaggagacg
gccaagatgacgatccacgacaagtctgacttgttcttcaatgactactccttcacacca
ctgtttgtgcaggagaactacacaagtgtcattccatattctgcaagaggcaacacatcg
cggcacctgtcggcattggctcgtgcagcagacagtatctgtgatggagatctagccgac
aggaagatcagatcttctcaaaactggaacctgctcccagcacaggccatcttctccagt
gtgatccccggggaagtgatgcggggcagcttaccccatatggtgcagttcccccagtgg
ctgggcaagaactccagccggaacaagaccgatcgcatcatgcaggagctccgcactcac
atgagactccaaacctcgggcgacatgaagggtctaaacatggattacctgcctgtgatc
cgacacgtgatgacccaccctctggtgcagcatggcggagatggggtcagggaggtcatc
gacttcatggataactacgacatcatcaaggaagactttgacaacatactggaaataacg
aagtggccaaacagttccgatcccctcagtaaactggataccaagacaaaggcagctttc
actaggacctacaacaaggagtctcatgtgacgccttatgccacgggggtcatgtctaaa
aagaggcgtggtcgagcccctattgcggaagaggatgacctcatggatggtgaggacagg
gcagcgatggcagtcagctccgatgaggacaatgacgacttggaggctgacaccatgatc
aagaaggggacgtccagcaagacggcagggaagaagggaggtgatgctgcagggaagaag
ggaggtgatgctgcagggaaggggaaggctggggggaaggggaaggctggcgctgggggg
aaggggaaggctggcgttggagggaaggggaaaggcaaggggaagggcaagagctga
DBGET
integrated database retrieval system
