Haliotis rubra (blacklip abalone): 124259156
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Entry
124259156 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124259156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrj03021
]
124259156
03041 Spliceosome [BR:
hrj03041
]
124259156
03036 Chromosome and associated proteins [BR:
hrj03036
]
124259156
Transcription machinery [BR:
hrj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124259156
Spliceosome [BR:
hrj03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
124259156
Complex B
124259156
Complex C
U2 SnRNP specific factors
124259156
Chromosome and associated proteins [BR:
hrj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
124259156
TFTC complex
124259156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
124259156
NCBI-ProteinID:
XP_046549206
LinkDB
All DBs
Position
Unknown
AA seq
1223 aa
AA seq
DB search
MFLYNLTLQRSSGISFAIHGNFSGSRLQEVIAARGKTLELLRHDPNTGKIYPVLSVEVFG
VIRAIMPFRLTGGSKDYIVVGSDSGRIVILEYIPSKNIFERIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMIGAIEKQKLVYILNRDAQARLTISSPLEAHKSNTLVYHMVGVDVGFENP
TFACLEIDYEESDTDHTGEAAQRTQQLLTYYELDLGLNHVVRKYSEQLEEHANFLISVPG
GNDGPSGVLICSENYVTYKNLGDQPDIRCPIPRRRYDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAVSMCVLKSGFLFLASEFGNHHLYQ
IAHLGDDDGEPYFSSAMPLEEGETFLFPPRTLKNLVLVDEIDSLSPIMTCQIADLANEDT
PQLYTLCGRGPRSTLRILRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTISCSQLGDDALVQIYPDGIRHIRADKRVNEWKTPG
KKNIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMSSDVVCMALGRVPEGEQ
RCRFLAVGLADNTVRIISLDPSDCLSPLSMQALPAPPESLCIIEMGGTEAKEETGEAGTV
GGLYLNIGLQNGVLLRTVLDTVTGDLSDTRTRYLGSRPVKLFRIAMQGAEAVLAMSSRTW
LSYTYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRXVFILDSGALEKLGAVF
NQVSWPLQYTPRKFVIHPESNNIILIETDHNAYTEDTKKHRKQQMAEEMIEAAREEEQEI
AAEMAAAFLNEDKPETVFGAPKSGMGMWASVIRVMNPIKGETFDKISLEQNEAAHSIALV
KFANKGDDQFVLVGVSRDLVLNPRSLSGGFVYTYLLVNQGTKLELLHKTAMDEVPTAIAS
FQGRVLIGLGKNLRVYDLGKKKLLRKCENKHIPNTVVSIHTMGNRVMVADVQESFHFLRY
KSQENQLIVFADDTNPRWITCSYQLDYDTVTGADKFGNITIVRLPTDVSDEVDEDPTGNK
ALWDRGLLNGASQKADVVANFHVGEVVTSLQKATLIPGGSESLVYTTLSGAIGMLVPFTS
HEDHDFFQHLEMYMRSEYPPLCGRDHLAYRSYYYPVKNVIDGDLCEMFNSMDASKQKSVA
EELERTPSEVSKKLEDIRTRYAF
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacctgaccctacagagatcctctgggatcagttttgctatacacggc
aacttctccggctcaaggctgcaggaagttatagcagctcgtgggaagacactagaactt
ctccgccatgaccccaacacagggaagatctacccagtgctgtctgtggaagtttttggt
gtcatcagagctatcatgccattcaggctcacaggaggctctaaagattacatagttgtt
gggtcagattcaggcagaattgtaattttggaatatattccatcaaagaatatatttgaa
aggattcaccaggagacatttgggaaaagtggatgtcgtcggattgtgccagggcaatac
ctggctgttgatcctaaaggaagggctgttatgataggtgctatagagaagcagaaactt
gtgtacattctcaacagagatgcccaggctagattgacaatctcttctccattagaagct
cacaagtccaacacactcgtctaccacatggtcggagtggatgtcggctttgaaaatcca
acgtttgcctgtcttgaaattgattatgaggagtctgacactgaccacactggggaggcg
gctcagaggacccagcagttactcacctactacgagttggaccttggtctcaaccatgtg
gtccgcaaatactcagagcagctggaagagcatgctaacttcctcatctcagttcctgga
ggaaacgatggaccaagtggtgtcctgatttgttctgagaactatgtgacctacaagaac
ctgggagaccagcctgacatcaggtgccccattcccaggaggaggtatgaccttgatgac
cccgagagaggcatgatatttgtatgtagcgccacccacaagacaaagtcaatgttcttc
ttcctggcacagactgaacagggtgacatctttaagatcaccctggagactgacgaagat
atggttacagagatccgactgaagtattttgacactgttccggttgctgtcagcatgtgt
gtcctcaagtctggcttcctctttcttgcttcagaatttggcaatcatcacttgtaccag
atcgcccacctgggagatgacgatggggagccctacttcagcagtgctatgcctctggaa
gaaggagagacgttcctcttccctcctcgaaccttgaagaacctggtgttggtggatgag
atcgacagtctgtcccctatcatgacctgtcagatagctgatcttgctaatgaagatact
ccacagctgtacacactgtgtggaagagggcccaggtctacccttcgaatccttcgtcat
ggactcgaggtatcggagatggccgtatccgagctgcccggtaaccccaatgctgtatgg
actgtgaagaaaagaattgatgatgagtatgatgcctacattatcgtgtctttcgtgaac
gccacccttgtactgtccatcggagagactgtagaggaagtgacagattctggcttcttg
ggaaccacaccaacaatatcttgttctcagctcggagatgatgctctcgtacagatctac
cccgatggtatccgtcatattcgtgcagacaagcgtgtcaacgagtggaaaactccaggg
aagaaaaacattgtgaagtgtgcagtgaaccagagacaggttgtcatagctctgacaggg
ggcgaactggtgtacttcgagatggacccgacaggtcagttgaatgaatacacagagcgg
aaggagatgtcatcggatgtggtgtgcatggctcttggtcgggtgcctgagggagaacag
agatgccgcttccttgctgttggtttggcagacaacactgtcaggatcatctcccttgac
ccatcggactgcctgtccccactgagtatgcaggcactgcccgcccctccagagtcactc
tgcatcatcgagatgggcggcactgaagccaaggaagaaactggggaggctggcactgtg
ggaggcctctaccttaacatcggactacagaacggtgtcctgctacgaacagtgctcgac
acagtaactggagatctgtcagacaccaggaccagatatctcgggtctcgacctgtcaaa
ctcttccgaatcgccatgcaaggagctgaggctgttttggcaatgtcaagtagaacatgg
ctgagctacacatatcagagcagattccatctgacaccattgtcgtacgagaccctggaa
tatgcctctggatttgcctctgaacagtgccctgagggtattgtggcaatttcaacaaac
actttgaggtaagtatttatattagattctggcgcgctggagaagctgggtgctgtgttc
aaccaggtgtcctggccgctacagtacacaccacggaagttcgtcatccaccccgagtcc
aacaatatcatcctcatcgagacggaccacaatgcgtacacagaggacaccaagaaacac
aggaagcaacagatggcggaggaaatgatagaagcggctcgggaagaggaacaggaaata
gccgcagaaatggcagcagctttcctcaatgaggacaagcctgagactgtgtttggtgcc
cccaagtcagggatggggatgtgggcatcagtcatccgtgtgatgaaccccatcaagggg
gagacattcgacaagatctcactggagcagaacgaggcagcgcatagtattgccctggtg
aagtttgccaacaaaggagacgaccagtttgtgttagtgggtgtgtccagagaccttgtg
ttgaacccgcgctccctcagtggagggtttgtgtacacctacctgctggtgaaccagggc
accaagctggaactgcttcacaagactgccatggatgaagtacctacagccatcgcaagt
ttccaggggcgggtattgataggccttgggaagaatctccgagtctatgaccttggaaaa
aagaaacttctccgtaaatgtgaaaacaagcatatccccaacaccgtagtgagcatccac
actatggggaatcgagtgatggttgctgacgtacaggagagcttccatttcctgcgctac
aagagccaggagaaccaactcattgtctttgctgatgacaccaacccaagatggataacg
tgttcataccaactggattacgacactgtcactggtgctgataaatttggcaatatcacc
attgttcggcttccgacagatgtgtctgacgaggtggatgaggaccctacaggcaacaaa
gctctctgggacagaggactgctgaatggtgcctcacagaaggctgacgtagttgctaac
ttccatgttggcgaggttgtgacgtccctccagaaggccacattgatccctgggggttca
gagtctctggtctacactaccctgtcaggtgctattggcatgctggtacccttcacgtca
catgaggatcatgacttcttccaacatctggagatgtacatgcgttcggagtatccccct
ttgtgcggccgagatcacctggcttacaggtcctactactacccagtcaagaatgtgatt
gatggcgatctgtgtgagatgttcaactccatggatgccagcaaacagaagagtgtggca
gaggaactggagagaacacccagtgaggtgtcaaagaaacttgaagacatccgaactcga
tatgctttctag
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integrated database retrieval system
