Haliotis rubra (blacklip abalone): 124259865
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Entry
124259865 CDS
T07967
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124259865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrj03000
]
124259865
Transcription factors [BR:
hrj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
124259865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_5
Ank_3
Ank_4
Death
DUF2170
Med15_fungi
Motif
Other DBs
NCBI-GeneID:
124259865
NCBI-ProteinID:
XP_046550036
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MADLQMQRQSLFGMKDVYFTECLPPAGVQNGPGMDDTGDSNDSVEVPLEQSHLPVDLQTK
FVDNGDYHMMNGNGTLEFQPHIKIVEEPQQRGFRFRYECEGPSHGGLQGEKSEKSRKSYP
SIKIENYNGPAKIVVTLVTDEDHPKHHAHKLVGRNCQNGICVQEVQLTSGIISFPNLCVL
HVTRKKATEVLEGRIIESLILERKVQQGHMSAEISITKDDKDKARKQAQEQAKNMSLNVV
RLCFQVYLMDEKKNFTKHLTQVVSRPIYDSKSPGASALKICRMDKYGGCCTGNEEVFLLC
EKVQKDDISVRFVEFSKDGSVLWEAFGNFSPLDVHRQYAIVFRTPPYRNTSIDKAVNVMI
MLQRKSDQETSEAKAFTYYPRNLDKDGIARKKRKAMPSLDGFGGHTGEQGWVWQLKGWGG
FGGSDGGGGGGQVPHRVLLPNGNVVYQDGNVPSTIEQAIQECYDSPVNSPYRTDLDELDS
PYADLSMDCEPIKTSHHTTVTDVTKPSSLKHKGQSRGTIKVADVRDVTTKMAAVKLSDTP
KSPGTEPTEKGSEDVKDSEVKDSGSDTSSSNAPTEGARTDEGFSESSSIPGDLSPKKAPD
GDDKPVPQRDPKQVQGKIELSKKKDEAIRMAQRTAVALREYAETGDIRYLLLVQRHLASI
QNENGDLPIHLAVINNQVIALQYLLDVMGTLPKSRSRVNAFNLLRQTALHLAVITKQKNV
IEILLHAGGDPSLCDRHGNTPAHLAVLSESMDCLHSLVRYIQPTANVNKPFPELDYLNYE
GYAPAHLAARRGNVAVLKTLVYGQADMNLQDGKSGRTPLHHAVEVDDLPTAGYLLMETDA
DVNAHCFDGNTALHIACGRGLVGMVALLMTAGADPNIENEEIPPLVEEGDDAEDNSLDSW
GERLGMRPADYAQENERILSILQGEIYTPQEPTDDLDNQDLQEDSVPSDNRETTTEITSI
YSCRNESGVDSMNFKLFQQGDLEKLDFLTRIELAKLLDPMQPGRDVFSLAERLDYFNLHH
ALEAMKEQSSPTRFLLDYYEASDGTVTKLRSSLQVMDRQDAVMIIDTALAPDKPADKTAT
DTRVDSGMESMGRKALPSRCNLTSS
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttacagatgcaacgacaaagtttgtttggcatgaaagatgtgtatttcaca
gaatgtctgccacctgcaggggtacagaatggcccagggatggacgacactggcgactct
aacgactcggtggaagttccactggagcagtcccacctccctgttgacctgcagaccaaa
tttgtggacaatggcgactaccatatgatgaatggaaatgggacgttggagttccagcca
cacatcaagatcgttgaggagccccaacagcgaggattccgctttcgctatgagtgtgag
ggtccctcccatgggggcctacagggggagaagagtgagaagagcaggaagtcctacccc
agcatcaagattgagaactacaatggtccggctaagattgtggtgaccctggtgacagat
gaggatcaccccaaacaccatgcccacaagctcgtgggaaggaactgtcaaaatggaatc
tgtgtacaagaagtacagttaaccagtggcattatttccttccccaatctgtgtgtgctg
cacgtcacacggaagaaggcgacggaggtgttggagggccgcatcatcgagtccctcatc
cttgagaggaaggtccagcaggggcacatgagtgctgaaatatccatcacaaaggatgac
aaagacaaagcccggaagcaggcacaagagcaggccaagaacatgtcgctcaacgtggtg
cggctgtgtttccaggtgtatctgatggatgaaaagaaaaacttcaccaagcatctgact
caagtggtatccaggccgatctatgacagcaaatcccccggtgcatctgcactcaagatc
tgcaggatggacaagtacggcggctgctgcacaggcaatgaggaggtgttcctcctgtgt
gagaaggtccagaaagatgatatctcagtgaggtttgtagagttcagtaaggatgggtcg
gtgttgtgggaggctttcggtaacttcagtcccctcgacgtccacagacagtatgcgatt
gtgttccgcacccctccttatcggaacacgtccattgacaaggctgtcaatgtgatgata
atgttgcagaggaagagtgaccaggagacaagcgaggccaaggccttcacatactatccc
cgcaatcttgacaaagatggtatagcaagaaagaagaggaaggccatgccatcactggat
ggttttgggggtcataccggggagcaggggtgggtttggcagctcaaggggtggggaggt
ttcggtgggtctgatggtggagggggcggaggacaagtcccacacagggttttactgccg
aatggaaatgtggtctatcaagatggaaatgttccgtccaccattgaacaagccatacaa
gaatgctatgacagccctgtcaacagtccatatcgcactgacttggacgagctggacagt
ccctatgctgatctgtccatggactgtgagccaataaagacatctcatcacacaaccgtc
acagatgtaacgaagccttcttcactcaaacacaaggggcaaagcaggggaaccattaaa
gtggcagacgtccgtgatgtaacaaccaagatggctgcagtaaagctgagtgacacaccc
aagagccctggcactgagccaacagagaaggggtcagaggatgtgaaggacagtgaggtc
aaggactcggggtcagacacaagcagttctaatgcaccgacagagggagctcgaactgat
gagggattctcagagtcatcctccattcctggagatttgtcgccgaagaaggcacctgat
ggtgatgacaaacctgttcctcagagagaccccaagcaagttcaaggcaagatagagttg
agcaagaagaaagacgaagctatccgcatggcacaacgtacagctgttgcccttcgagaa
tacgcagagaccggggacatccgctatttgctgctggtacagcgccatctagcatccata
caaaatgaaaatggagatctcccgattcacctggcagtaatcaacaaccaagtgatagca
ttgcagtacctgctggacgtcatgggaacactcccaaagtccaggtcaagggtcaatgcc
ttcaacctcctcagacagactgccctccatcttgctgtcatcacaaaacaaaagaacgtc
atcgagattcttctccacgctggtggagaccccagcctctgtgatcgccatggtaacaca
ccagcacacctggcagtgttgagtgagagtatggactgtctgcattctcttgtcagatat
atacagcccacagcaaatgtgaacaaaccgttcccagagttggattatctcaattatgag
gggtatgcccccgcccacctggcagctcgccgcggcaacgttgcagtgttgaagacgctg
gtgtatggtcaggcggacatgaatctccaggacggcaaaagtggtcgtactccactccac
catgctgttgaagttgatgacttgccaacagcagggtatcttcttatggagactgatgct
gacgtgaatgcccactgctttgacgggaacactgcactacacattgcatgtgggcgtggg
ctggtgggaatggtggcgctgctgatgacagctggtgctgatcccaacatcgagaacgag
gagatcccccccttggtagaggagggggatgatgcagaggacaacagtctagactcctgg
ggagagaggctcggcatgaggccagcagactatgctcaggagaatgagaggatcctgagc
atccttcaaggtgaaatatacactccacaagaacccacagatgatttggataaccaggac
ctccaggaggactcggtgccctcagacaaccgggagacaaccacggagataacgtccatc
tactcatgccgtaatgagagtggagtcgacagcatgaacttcaaactgtttcagcaaggt
gaccttgagaagctggatttcctgacacgaatcgagttggcgaagttgcttgacccaatg
cagcctggacgtgatgttttctctctggccgaaaggctggactattttaatctccatcac
gccctagaggccatgaaagaacagtccagtcctactcgcttcctgctcgactactacgag
gcatctgatgggacagtgacgaagttgcgcagctcactgcaagtgatggatcgacaggat
gctgtcatgatcatcgacacagccctggcaccagacaagcctgctgacaaaaccgccaca
gatacccgtgttgactcggggatggagagtatggggagaaaggccctcccgtcacgctgc
aacctcacatcatcatag
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integrated database retrieval system
