Haliotis rubra (blacklip abalone): 124260511
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Entry
124260511 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: transient-receptor-potential-like protein
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrj04040
]
124260511
Ion channels [BR:
hrj04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124260511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank
Ank_3
Ank_4
YVC1_C
Motif
Other DBs
NCBI-GeneID:
124260511
NCBI-ProteinID:
XP_046550797
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MVLTGYGSKRSGSRGSTRAVDIPLETIKHGSRMDPQERIFLDAAEKGDKPTMIRCLHGSN
PVNVNCTDMLGRSAIQIAVDNENTEIVELLLKQDGVKIGDALLYAIREGVYRIVEMLIEH
PSITREMLGYDWSKTRHMDEESFDYSPDISPVILAAHCNQFEILQLLLLHGATIERPHQL
SCSCKRCQAQVHADSLRHSLLRINTYRALASPAWISLTSPDPVLTAFMLSWELDKLALRE
NEFKDSYLQLAHQCRKYACDLLDQCRSSEEVIAVLNKMTDGEEEEEEEDDDDNDKLTLSR
LKLALKYEQKQFVAHPHCQQLLTSIWYEGLPGWRKRNGFTKFLICIGLILLLPFMAVYYW
VFPRSKIGQLLRSPFMKFLYHSASFGVFLFLLVCASTDISTSHKREKFRGLPPSELEWMI
VLWVTGFIWAECKQLWEEGLKAYMRQWWNWLDFIMLSLYLATFSLRCVAFLQIESGNYGP
KELARRDWPHNEPTLISESLFAIANVFSFARIIYLFQANQHLGPLQISLGCMLIDIAKFL
FIFFLVLTSFACGINQLYWYYYPSNEDAEDVFFTXLSMNQGLLWTLLTSTTECRVHGGAF
FTXVPLDRLIVFGLVSNGVGGSHYDWQNTFTCLLSCLSVLLQNHADMEWKFSRSKLWMGY
FDEGSTLPPPFNLIISPKSIYYFLRGLKNIFCSCCQASRNSQRKTSEGTIRSKQSVGPVE
YDIYKTVESGNPYEIEERPTYNGDVRGVIPPQPDALQYQDVMRRLVSRYIHQTKKQLRQD
GVNEDDLLEIKQDISSLRYELREDRKRECARTSSHMDCLRQDIVHTLRGVSPTSSPRLHN
LQKVSSSTSISNFGNSYQNLNNNNSYGNNSYPSMLSQQDLDYLKWELMSGLRSEVKDAIQ
SCLQTQTPPPPTPMMSSMGSDLYHTHLYTQL
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgactggctacggcagtaaacgatcaggttcgcgtggttcgacacgagcggtg
gacatccccttggaaacaattaaacacggaagtaggatggatccccaagagaggatattt
ctggatgctgcagaaaagggagacaagcccacaatgattcgctgtctccatggttcgaat
ccagtaaatgtcaactgtacagatatgttgggccggtcagccattcagattgctgtggac
aatgaaaacacggaaattgtggagctgctgttgaagcaggatggtgttaagatcggtgat
gcgttgttgtacgcaataagggaaggtgtatatcgtattgttgagatgttgattgagcat
ccttcaattacacgagaaatgctgggttacgattggtcgaaaacacgtcatatggatgaa
gaaagttttgactactctccagacatttctccagtgatcttggcagctcattgcaaccag
tttgaaatactgcaacttttactactccatggtgcaaccattgaacgcccccatcaactg
tcatgctcctgcaagcgatgtcaagcacaagtgcatgctgacagcttacgacattcactg
ctcagaatcaatacctaccgggccttggcaagtccggcgtggatctctctcaccagcccg
gacccggtactcacagccttcatgttgtcgtgggagctggacaaactggcgctccgagaa
aacgaattcaaagactcgtacctgcagctagctcatcagtgtcggaagtatgcgtgtgac
cttctggaccagtgtcgcagtagtgaggaggtgattgctgtcctgaataagatgactgat
ggagaagaggaggaggaggaggaggacgacgacgacaatgataagctcaccttgtccaga
ttaaaactggcactcaagtatgagcagaaacagtttgtagctcatccacactgtcagcag
ctcctcacgtccatctggtatgagggacttccgggatggaggaaacgcaacggcttcacc
aaattccttatctgcattgggctcatcctgctgcttcccttcatggctgtgtactactgg
gtcttcccacgcagtaaaatcggacaactccttcggagtcccttcatgaagttcctttac
cacagtgcatcgttcggagtgtttctatttctgttagtgtgtgcgtcaacagacatcagt
acttctcacaagcgggagaaattccgtggattacctccatcagagttggagtggatgata
gtgctctgggtgacagggtttatatgggcggagtgcaagcagctgtgggaggagggtctg
aaggcgtatatgcggcagtggtggaattggctggactttatcatgctgtcgctttatctg
gcaacattctcgctgcgatgtgttgcattcctccagattgagtctgggaactacggccct
aaagaactagcaaggagagactggccacacaacgaacctaccctcatctcagaatcttta
ttcgccattgcaaatgtttttagctttgctcggattatatacctgttccaagccaatcag
catcttggtccgctccagatatctctgggatgtatgctcattgacattgccaagtttttg
ttcatcttcttcctggtgctcacatcgtttgcttgtggaatcaatcagctctactggtac
tactaccccagcaacgaagatgcagaagatgtcttcttcacgtaactttcgatgaatcaa
ggtttactttggactttgttgacaagcacaacagagtgtcgcgtacatggtggagcgttt
ttcacatgagtaccattagacaggttgattgtttttgggttggtcagtaatggagtggga
gggagtcactacgactggcagaacacctttacgtgtttgttatcgtgtttatctgtgttg
cttcagaaccatgctgacatggagtggaagttttctcgctccaaactctggatgggatat
tttgatgagggttccaccctcccccctcccttcaacctcatcatcagtccgaagtccatc
tactatttcctgcgtggacttaagaacattttctgttcatgctgtcaagcaagtcgcaac
agccagcgcaagacgtcggagggaacaatcaggtctaaacagtctgtgggtccagtggaa
tatgatatctacaagactgtagaaagtggcaatccctatgaaatagaagaaagaccaacc
tacaatggtgatgttcgtggagttatcccccctcagccagacgccctgcagtatcaggat
gtgatgcgtcgcctggtgagtcgctacatccatcagactaagaagcagctgcggcaggat
ggagtaaatgaagacgacctgctcgagatcaagcaggacatctccagtctccgatacgaa
ctgcgagaagacagaaagcgtgagtgtgcacggacctcatcacacatggactgcctccgc
caagatatagtccacacactgagaggtgtttcacctacatcaagcccaaggttacataac
ctccagaaggtcagctcaagtacaagtatcagtaactttggcaacagctaccagaacctc
aacaacaacaacagctatggcaacaacagctacccaagcatgctgtcccagcaggatctt
gattacttgaaatgggagctcatgtccggtctgaggtcggaggtcaaggatgcgatacag
tcctgtctccagacgcaaacaccccctcccccaacccccatgatgtctagcatgggttca
gatctctaccacacacacctgtatacacaactgtga
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