Haliotis rubra (blacklip abalone): 124261129
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Entry
124261129 CDS
T07967
Name
(RefSeq) tRNA pseudouridine synthase A-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrj03016
]
124261129
Enzymes [BR:
hrj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
124261129
Transfer RNA biogenesis [BR:
hrj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124261129
Prokaryotic type
124261129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
124261129
NCBI-ProteinID:
XP_046551411
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MLRRLSASLSRIIRKTRNMEEALDLSKHATREQGMEKRPLEKVEEDSPEEEPAQKKSKQE
QVAPMQGRADRKRKVAMLLAYCGKGYYGIQRNRGFNTIEEELLTALLKNELIPQEHFDCP
QKMSFQRAARTDKGVSAVGNVVSLKMLLNQDTLVDNINASLPPQIRVIAYRRATKAFNSK
NQCGGRTYAYMTPTYAFAPLKKFITAEYRITDDIIKEVNRILTMYKGTHNFHNFTSGIKP
NDPSAKRYIISFECGQPFVTEGIEFVILRVKGQSFMLHHIRKMIGLMIAIVKGYCGEEVM
DKAWQPDKVDVPKAPGVGLMLEQLHYDGYNKRFGKDGMHEALDWSEYEEVLEKFKKEHIL
SHIVQSEKEESVMLKWLGTLHFHKFDIKDEEVPRWKMFKIYGDLKKETEGKNQDGNRDSS
DSTDCTDSGTTEKKDDTVAAGDAEVITEDDSETIKSRGTKPDETVSEDKSETKPDVKPDS
TEPMTDSALSELWRKGSHQF
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgacgcctgtcggcttctctgagtagaattatccgaaaaacaagaaatatggaa
gaagctctcgacctcagtaaacatgctacccgagagcagggtatggagaagaggcctttg
gagaaggttgaggaagacagccctgaagaagaacctgcacagaagaaatctaaacaagag
caagttgctccgatgcagggtcgagctgaccggaagaggaaggtggccatgctgctggct
tactgtggcaagggttactatggcatacaaagaaacagaggatttaacaccatcgaggaa
gaattactgacagccctactcaagaatgagctcattccacaggaacactttgactgtcca
cagaagatgtccttccagagagcagcccgaacagacaagggtgtcagcgccgtagggaat
gtggtgtcgttgaagatgctgctcaatcaagacactttagtggacaacatcaatgcgagc
ctgccgccacagatcagggttattgcatacaggagagcaacaaaagccttcaatagtaaa
aaccagtgtggtggccgaacatatgcctacatgacaccaacgtacgcgtttgcaccactc
aagaagttcataaccgcagaatacagaatcacagatgatattatcaaagaggtcaacaga
attcttacgatgtacaagggaactcacaacttccacaactttacctctggcataaaacca
aatgatcctagcgccaagagatatatcattagttttgagtgtggccagccttttgtaacg
gagggcatcgagtttgttatcttgagggtcaaagggcaaagcttcatgcttcatcatata
cggaagatgatcggactgatgatagccatagtgaagggctactgtggtgaggaggtgatg
gacaaggcgtggcagccggacaaggtagatgtccccaaggccccaggagttggtctgatg
ctggagcagctccattacgacggctacaacaagaggttcggtaaagatggaatgcatgaa
gctttggactggtcggaatacgaggaagtgctggaaaaattcaagaaagagcatattctt
tcccacatcgtccagtctgagaaagaagaaagtgttatgttgaagtggcttgggacgttg
cacttccacaagtttgacatcaaagacgaggaggtgccgcggtggaaaatgttcaaaata
tatggtgatctcaagaaggagacagagggcaagaatcaagatggtaacagggattcgtcc
gattctacggactgtactgatagcggaaccacagagaagaaggatgacaccgtagcagct
ggggatgctgaagtcatcacagaggacgactcagagacgatcaaatcacgtggaaccaaa
cctgatgaaactgtatcagaggataaatctgagaccaagccggatgtgaaacctgatagt
acagaaccaatgacagactccgcactctcagagctgtggcgaaaaggtagccaccagttc
tga
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