Haliotis rubra (blacklip abalone): 124261445
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Entry
124261445 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124261445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrj03021
]
124261445
Enzymes [BR:
hrj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124261445
Transcription machinery [BR:
hrj03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
124261445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
124261445
NCBI-ProteinID:
XP_046551719
LinkDB
All DBs
Position
Unknown
AA seq
1150 aa
AA seq
DB search
MASDTEQFVEELNFKHLTVPDFGKPNAQQHKLLHDLLKPHIESFNYLIHEGLQAAVDDIA
PLRFQLPNNDQVTLSLSNPSLGSPCVSENNKHASTFQVFPTECRQRGMSYKGLLEIHVGC
YVGSHLIEEREQSLGHLPIMVKSDLCNLSKLTPAQLVQRNEDEEVCCTYFVVNGNEKVIR
MLIMNRRNVPLCFKRDRWRMRGNGYTEYGATCRCVKEDHEGQNMYLHYLTTGAMMTCFIY
NREMFFIPLMTILKGLIDCTDKFIFDELTKGKEEDSFYKGCVVNMLQETLSDELFTTSDV
LKHIGQHFRAKLAYRFCPPWISDKQAGELFFKHIVCMHLRSNKEKFDFLIHMARKLYAFT
KGECAADSPDNPMNHELLLSGHLMLMVIKEKMNDFLMRVKLVIQKAAEAVDDFELTPAAF
QRALSQSGGDKCEVTRSVQYLLSTGNLTSRSGLGLMQYNGFAIVADKLNFFRFLSHFRCV
HRGAVFTTMRSTGVRKLRPEAWGFICPVHTPDGAPCGLMNHLTHSCQVVTVQHKKTHLLT
VMEDAGLCRLEDRSPGTVKGSYPVYLDGIPVGYISDNLAKNFCDRLRVMKVKGIDKVPAI
LEICLVPKTEFASQYPAVYLFMGPTRMMRPVLNLSLGMVEMIGTFEQVYLDICITEEEFH
SGVTTHQEIAPTSILSFLANMTPFSDFNQSPRNMYQCQMAKQTLGTACHNIAHRADNKLY
RLLTPQSPLVRPKYYSDLGIDIYPPGTNAVIAVISYTGYDMEDAMIINKSSAERGLAHGC
IYKSQSISLQTETATNTKYSCVLSYIPSKSSQKWNLDSDGLPPVGAYLQDGDALYSYVNI
QTGAMTVEKYKSQEAAYVDSVKILQNPSDDGGTGLLQRAILMLRIQRNPIIGDKFATRHG
QKGICSMFWPAEDMPFTESGMTPDIIFNPHGFPSRMTIGMMIEIMAGKSSALHGLCHDAT
PFTFSEQQPAIDHFGKMLTAAGYNYYGTETMYSGVNGREMEVNIFCGLVYYQRLRHMVSD
KFQVRSTGPVDSLTHQPVRGRKRAGGIRFGEMERDALIAHGTAFLIHDRLFNCSDGTLAR
ICTSCGSLLSPCLDKPPVATAAASVESRRVWSCKVCRRSDTIQVVAVPYVFRYLVAELAA
MNIKLKLGVS
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgatacagaacaattcgtggaggagttaaacttcaaacatctgactgtgcca
gattttgggaaaccaaacgctcaacaacacaagctccttcatgatctgcttaaacctcac
atagagtcgttcaactatctgattcatgaaggtcttcaagcagcagttgatgatattgcc
ccgttacggtttcaacttcccaacaatgatcaagtaacattgtccctttcaaatccgtcg
ctgggctcaccatgtgtgtccgagaacaacaagcatgccagcaccttccaggtgttcccc
accgagtgtcgacagaggggtatgagctacaaggggttgctggaaatccacgttggatgc
tatgttgggagtcatctgattgaagagagggaacagtcactagggcacctgcccatcatg
gtgaagtctgacctttgtaatttgtccaaactgacgccagcacagctggtccagcggaat
gaagatgaagaggtttgctgtacttactttgtggtcaatggaaatgagaaagtcatacgg
atgttaattatgaacaggagaaacgtgcctctgtgcttcaagcgagatcgatggcggatg
cgagggaatgggtacacagagtatggcgccacctgtcgatgtgtgaaggaggatcatgag
gggcagaacatgtacctccactatctgaccactggtgccatgatgacgtgcttcatctac
aatcgggagatgttcttcatcccacttatgaccattctcaagggactgatagattgcaca
gacaagttcatctttgatgagctcaccaaggggaaggaagaagattccttctataaaggg
tgtgtggtgaacatgctgcaggagactctgtcagacgaactgttcaccacgtcggacgta
ctcaagcacatcggccaacacttccgcgccaagcttgcctacagattctgtcctccatgg
atctctgacaaacaggctggggaactcttcttcaaacatattgtgtgcatgcatcttaga
tccaacaaagaaaagtttgactttctcattcacatggcgaggaagttgtacgcgttcacg
aagggcgagtgtgctgctgattcccccgacaaccccatgaaccatgaactgttgttgtcc
ggacatctcatgctgatggtcatcaaggagaagatgaatgacttcctcatgagggtgaag
ttggtgatacagaaggctgctgaagcagtggatgactttgagctcacacctgctgccttt
cagcgtgcactgtcacagtcaggtggagacaagtgtgaagtgacgaggagtgtacagtat
ctcctgtccactggaaacctgacatctcgatctggtctgggactcatgcagtataatggc
ttcgccattgtggctgacaaactcaacttcttccggttcctgtcccacttccggtgtgtc
caccgaggagcggtcttcaccaccatgaggtccacaggagtccgcaagctccgccccgaa
gcctggggtttcatttgccctgtacacacaccagatggcgctccatgtggcctgatgaac
catctcactcatagctgtcaggttgtgacggtgcagcacaagaagacgcacctcctgacg
gtgatggaggacgcaggattgtgtcgactggaagacagatctccaggcacggtgaagggc
agctaccccgtctacttggatggcatccctgttgggtacatcagcgacaaccttgctaaa
aacttctgtgatagacttcgcgtcatgaaagtcaagggaattgataaggtgccggctatt
ctggagatctgcctggttcccaagaccgagtttgccagccagtatccagcagtctacctg
ttcatgggccccaccaggatgatgcggcccgtcctcaacctaagtctggggatggtggaa
atgataggcacgttcgagcaggtctacctcgatatctgcatcacggaggaggagttccac
tccggggtgaccacacatcaggaaattgccccaaccagcatactcagcttcttggccaat
atgacaccattctccgacttcaaccagagtcccaggaacatgtaccagtgccagatggca
aagcagacgctgggaaccgcctgccacaacatcgcccaccgcgccgacaacaagctctac
cgtctcttgacaccacagtctccactcgtcaggcctaaatactactctgatctgggtatt
gatatctaccctcctggcaccaacgctgtgatagctgtcatatcctatacaggctatgac
atggaagatgctatgatcatcaacaagtcatcggcagagagaggtctggcccatggctgt
atatacaagtctcagtctatttctcttcagacggaaacagcaaccaacacgaagtattcc
tgcgttcttagttacatacccagcaagtcgagccagaaatggaatcttgactcggatggt
ctgcccccagtcggtgcctatcttcaggacggggacgctctgtacagttacgtgaacatc
cagactggtgccatgacagtagagaaatacaagagccaggaggcagcctatgtagacagc
gtgaagattctgcagaacccatcagatgacggtggaaccgggctgttgcagagagccatc
ttgatgcttaggatacagagaaacccaatcattggagataagttcgcaacacggcatggc
cagaagggaatttgcagcatgttctggccagccgaggacatgccgtttacggagagtggc
atgacgccagacattattttcaaccctcatggcttcccgtcaagaatgacgataggtatg
atgatcgagatcatggcggggaagtcatccgccctccatggcctttgccacgatgccacg
cccttcacattctccgaacaacagcccgctatcgaccacttcggcaagatgttgacagca
gctggctacaactactatggcacagagactatgtacagcggtgtgaatggccgagagatg
gaggtcaacatcttctgcggcctcgtgtactaccagagacttcgtcacatggtgtccgat
aagttccaggtgaggagtacaggtcctgtcgattccctcactcaccaacctgttaggggg
aggaagagggccggcggaatcaggtttggagagatggagagagacgccctcatagctcac
ggcacagctttcctcatccatgacagactcttcaactgctccgatggaacactggcccgt
atctgtacgtcgtgtgggagtctgctgtctccgtgtcttgacaagccacctgtggctact
gcagcagcatcagttgagtcccgccgggtgtggtcctgcaaggtgtgtcggaggtcagac
accatacaggtcgttgccgtcccctacgtcttccgctacctcgtagccgagttggctgcc
atgaacattaaactcaaacttggtgtcagttga
DBGET
integrated database retrieval system
