Haliotis rubra (blacklip abalone): 124262124
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Entry
124262124 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124262124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124262124
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124262124
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124262124
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
124262124
NCBI-ProteinID:
XP_046552528
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MADRRKLQGEIDRCLKKVSEGVEVFEDIWKKVQQATNSNQKEKYETDLKREIKKLQRLRD
QIKSWVANSDIKDKSTLLDHRKLIETQMERFKVVERETKTKAYSKEGLGAAAKLDPQTKE
KGEITNWLSHMIDNLNVQLDQFESELETLTCTSKRKKTEHEKLDELKNWQDRHKVHIQKL
EMVMRMVDNDAITPDQIKKIKDDVEYYVESNQEPDFEENMFVYDDLDLEEIVNAHLVASP
PENEDAEKLMTMAMSTPTSTNSSSPSPSPSVNHSTGSAQSEVCLFQDKSEEVERKRHKSQ
PDEKLRSNQSLTPTITMSNKQTTPSKQTTQSNPHSQNSDSSSSNHHPTTPTPPLTAYAAA
ASSQNSAPGTPIPRLSHSIPSVWGQRNASAHSSFLQDAKPTGNSLDHVAAASSATTNGTP
NSVSTSVNSVSVLNSSGNPSVPSAPSPLMSGAAAPSPIGSTNSTASSTTLILSQSQIKSD
APLTMNGPLTVVGPSLQSPELMSSLKSMAQQAIVEAGLESQIPTSHVTTDSKGVFLSSTV
QAPPSQPIAPSPDQTIPSQQSQSVPTSTAQQPSVQQQQQAPQTTTIHLNPLLGVAPLGPM
PLSKEHYYQLSMLEAAFHHLPHPSDSERLRHYLPRNPCPTPSYYPQVPPPHADSVEFFQR
LSTETLFFIFYYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITEDYEQGTYI
YFDYEKWGQRKKEGFTFEYRYLEDRDLN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaggcgaaagcttcaaggtgaaattgacagatgccttaagaaagttagtgaa
ggtgttgaagtttttgaagacatatggaaaaaggtacagcaagcaactaatagcaaccaa
aaggagaaatatgaaactgatctgaaaagagaaatcaagaagttacagcgattgcgtgat
cagatcaaatcatgggttgccaacagcgacatcaaagacaagtccactcttttggaccac
aggaaacttatagaaacacaaatggaaaggttcaaagtagtggagcgagaaacaaagacg
aaagcttactcgaaggagggtcttggggcagctgcaaagctagacccgcagacaaaagag
aaaggagaaatcacaaactggttatcgcacatgattgataatctcaatgtccagcttgat
cagtttgaaagtgaactggagacattaacatgcacatccaagagaaagaaaacagagcat
gaaaaactggatgagttgaagaactggcaagaccgacacaaagtccacatccagaaactg
gagatggtgatgaggatggtggataatgatgccatcacacccgaccagattaagaagatc
aaagatgatgttgagtattatgttgagtccaaccaagaaccggactttgaagaaaatatg
tttgtctatgatgacctagatctggaggaaatagtcaatgctcatttggtagcctctccc
cctgaaaacgaggatgcagagaaactgatgacaatggcaatgagcacaccgacatcaaca
aactcaagttctccttcacctagtccaagtgttaaccattccacagggagtgcgcaatca
gaggtgtgtctttttcaggacaaatctgaagaagttgagaggaagaggcataaatcacag
ccagatgagaagctcagaagcaatcagtcgttgacaccaacaataacaatgagtaacaaa
cagaccacgccttcaaaacagacaactcaaagcaacccccattctcaaaattctgacagt
agttctagcaatcaccatcctacgactccaacccctcctctcacagcatacgcagctgct
gccagcagtcagaacagtgcaccgggtactcccattccacggctctcccattccatccct
tctgtgtgggggcagcgaaatgcctctgctcacagtagcttcctccaggatgctaagccc
acaggcaactctctagaccatgtggcagcggcaagcagtgcaacaacaaatggtacccct
aactcagtatcaaccagtgtcaactctgtctctgtgttaaactcatcgggaaatccgtct
gtaccatcagcgccatcaccgttaatgagtggcgctgcagcaccttcacccataggttcc
accaactctacagcatcatcaacgacattaatcttgtcacagtcacaaattaagagtgat
gctccattgacaatgaatggtccccttacggttgttggaccatcattacagagtcctgaa
ttgatgtcttcgttaaaatcaatggcacagcaagcaattgttgaagcaggtttagagagt
cagataccaacatctcatgtcacaacagatagcaaaggtgtgtttctcagctccacagta
caagcccctccctcacagcccatcgccccatcacctgatcagaccatacccagtcagcag
tcacagtcggtgccaacatccacagcacaacagccatcggtccaacaacagcaacaggca
ccgcagaccactaccatccacttaaatccattgttaggtgtagcacctcttggacccatg
cctctaagcaaagaacattactatcagctctctatgttagaagctgcttttcatcatttg
cctcatccttcagactctgaaagattaaggcactacttgccaaggaatccatgtcctaca
ccttcgtactatccccaagttccccctccccatgctgactccgtagaattcttccaaaga
ttgtcaacagaaaccctattctttatcttttactacatggagggtactaaggctcaatac
ctggcagcaaaagcattgaaaaagcaatcttggaggttccatacaaaatacatgatgtgg
ttccaaagacatgaagaaccaaaaactattacagaagactatgaacagggcacatatatc
tactttgattatgagaagtggggccaaaggaaaaaggaaggttttactttcgaatatcgg
taccttgaagaccgagacttgaactaa
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