KEGG   Haliotis rubra (blacklip abalone): 124262164
Entry
124262164         CDS       T07967                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
hrj  Haliotis rubra (blacklip abalone)
Pathway
hrj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hrj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    124262164
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hrj03019]
    124262164
   03036 Chromosome and associated proteins [BR:hrj03036]
    124262164
Messenger RNA biogenesis [BR:hrj03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     124262164
Chromosome and associated proteins [BR:hrj03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     124262164
    COMPASS/SET1 complex (yeast)
     124262164
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_SPT8 Beta-prop_NOL10_N Beta-prop_EML Beta-prop_Aladin PAC11 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_HPS5 NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 Tricorn_2nd WD_LRWD1 MIOS_WD40 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 124262164
NCBI-ProteinID: XP_046552578
LinkDB
Position
Unknown
AA seq 314 aa
MKLSDRTVINFKVAKIFRENTDRINSVDFAVNGETIITSSEDDSIVIYDCLNGTPKRTLN
SKKYGVDLIRYTHAVNTALHCSTKIDDTIRYLSLHDNKYIRYFPGHTKKVVTLNMSPIDD
TFLSGSMDKTIRLWDLRSQNCQGLMNLSGRPVAAFDPEGLIFAAGINSECVKLYDLRSFD
KGPFNVFRLPQDKDCDWTQLKFSPDGKLILISTNGSVLRLIDSFQGAPLQIYAVRGHQPK
GVPLEASFSPDSRYVFCGSTDGKIHCWSTETGKKIAELLGDHPGPIQHVQFNPKYMMFAT
ACTNMAFWLPLTDD
NT seq 945 nt   +upstreamnt  +downstreamnt
atgaagctctctgatcgtacagtcattaatttcaaagtagcaaagatattcagagagaat
acggatagaataaatagtgtagatttcgctgtcaatggcgaaacaataataacaagcagt
gaagatgattctattgtcatatatgattgcttaaacggaacacctaaaaggaccttgaac
agcaaaaaatatggagtggacttgatacgctatacacatgcagtcaacacagctttgcac
tgttcaaccaaaatcgatgataccatacggtatttatcgttgcacgacaacaaatacatc
agatattttccagggcacacaaaaaaagtcgtgacattaaacatgtcccccatagacgac
acatttttgtctgggtccatggacaagacaatccgtctgtgggatctgcgatcacaaaat
tgtcagggactgatgaacctttctgggcgacctgtggcagcatttgacccagaaggattg
atttttgcagccggaatcaattctgaatgtgtgaagttgtatgatcttcgctcatttgac
aagggcccattcaacgtcttcaggctgccacaagacaaggactgtgattggacacagctc
aaatttagcccagatgggaagcttattctcatctcaacgaacggatcagtactccgctta
attgattcatttcagggggcacctcttcaaatatatgcagtaaggggtcaccaaccaaag
ggggtgccactagaggcgtctttcagtccagactcgcgctacgttttctgtggttcaaca
gatggcaagatacattgttggagcacagagactgggaagaagatagccgagctactgggg
gatcatcctggacccattcaacatgttcagttcaatcccaaatacatgatgtttgccaca
gcttgtacaaatatggcattctggttaccattaactgatgactga

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