Haliotis rubra (blacklip abalone): 124263951
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Entry
124263951 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124263951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124263951
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124263951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
Tailspike_C
Motif
Other DBs
NCBI-GeneID:
124263951
NCBI-ProteinID:
XP_046554634
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MSRHRAVRGMNLDDEYDDDDEYYSQSVEDNFCISPGTAAQFTFNRGQTTFATYMGGEDEV
EAVESDDDVDHQGASSGQTDNKLNAVDQAKLNSCLEEIHNILGECRPDSVYRETIIKHNF
SLQASLDELLSQKEAPKPQRAPRQNRRNKSQGDSDSDEASDTESDARAPDSGKGETLVEI
NQIDHLKQSNTLSSICSKAHIGGISELTKPVSTGAGLSLADFAKGPQSQSGIMASHDWIK
NNVCLNSNIPKLSGLIEELGQMKVDEAQLMLGHKMEGRSTKSSLSSSTGSDSGMSLSQLA
LMHQQQKQTQPSIQAPRPTSSSGDPASAVSVETSVSAGINITQGRHFKTFTGSPKSQSSS
LGSDSSLSLAELASRHQQTHSKGGYSPSSSLAELAKQHSPTKSAGTVSLSVLAQQHSLST
VQGTGKGLSSQVPISERSAGLSGLGSFTPGLSLAQLASSHKATQSTPGLGSLAPASAAMK
PGSQLGGVSLANLAKGHKHSDQSKQLPIGNTSASSTPKPEGTLCLSDLLKSKVTISGSRQ
SSVDRTPSPNDTSSSFTAVQDEITLLVKVQCDATLQSTPSILGKALCLLKTRKRKASGSD
KFSMKYPRFMYAVQAKGVKHHTPVHKREVKLFDFSTPSPDDLVRQRQRGAFTRTGERHVS
SYRHHKYRCTYPERSTFDFQVPEFHWKCNKFNFESNCDSKEGACRGFEPVVATSTKSDDR
LAPQVATSCDNVTVGLGGAAASTSETTLGESTMPLASSSTSSLLTPKKDPAYRPPLPRSS
SKSKQKINVQEEYTKRQGEMELLNLVVIGHVDAGKSTLMGHLLYQLGSVNKKAMHKYEQE
SKKLGKGSFAFAWVLDETEEERTRGVTMDVAQTKFQTPKKIVTLLDAPGHKDFIPNMITG
AAQADVAILVINATKGEFETGFETGGQTREHALLARSLGVAQIIVAVNKMDTVDWSEDRY
NEVVKKIGQFLKQAGFREGDVSFVPCSGLGGENLTQTVKEPKLAAWYKGPTLSEQIDKFK
SLERPIDKPFRLNVGDVFKGQGTGFRISGRIGAGYIQAGDRAIVMPGNVTATVRNVFIDE
MPVQVAFAGDHVTILISGIDIANVNIGSVLCDPVNPAKFSTRIRAKIVIFSLEVPITRGY
PVVFHYQSVSEPAVIRRLLAQLNKSTGEVVKKKPRCLVKNTSAVVEIELERNICLEEYKD
FKDLGRFMLRSGGATIAAGLVEEILPQKVKEDQ
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccacagggctgtgcgtggcatgaacctagatgatgagtatgatgatgatgat
gaatactatagtcagtcggtggaggacaacttctgcatctcgccagggacagctgcacag
ttcacattcaaccgtggccagaccacgttcgccacatacatgggtggagaagatgaggta
gaggcggtggagagtgacgatgacgtagaccaccagggggcatcatcaggacagacggac
aacaaactaaatgctgttgatcaagctaaactaaacagctgtttggaagagattcacaac
attcttggtgagtgtcgccccgactcagtctacagggagaccatcatcaaacacaacttc
agcctgcaggcctccctggatgaactgctgtcacagaaagaagcacccaagcctcagaga
gcaccacgccaaaatcgacggaacaaatctcaaggagatagtgatagcgatgaagctagt
gacacagagtctgatgctagggctccagactccgggaagggggagaccctggtggagatt
aatcaaatagaccatctaaaacaatcaaatacattatcaagcatttgttcaaaggctcac
attggtggtatttcagaattaaccaaacctgtttccactggggcaggtttgtctctggct
gactttgctaaaggtcctcaaagtcagtcaggaataatggccagtcatgattggattaag
aataatgtgtgtctcaattctaacattccaaagctttcaggtttaattgaggagttaggt
caaatgaaagttgatgaagctcagcttatgttaggtcataagatggaaggtagaagtaca
aagtcctcattaagttcaagcactggatcagactcagggatgtcattatctcagcttgca
ttgatgcatcagcagcagaagcagacacagcccagcatccaagctccgaggccaacctca
tcctctggggatcctgcatcagctgtgtccgtggagacttcagtgtcagctggaatcaac
atcactcagggcagacatttcaagacgttcacgggaagtcccaagtctcagagctccagt
ttaggttcagattcatcactgtccctggctgaactggcatcccgacaccaacagactcat
tccaagggaggctactctccttcctcatctttggctgaacttgctaaacaacattctcca
actaaaagtgctggaactgtttccctgtccgtgctggctcaacaacacagtttgtccaca
gttcagggaacagggaaagggttatcatcacaggtgcctatttctgagaggtctgcagga
ttgagtggcctgggcagtttcacaccaggtctgtctctggctcagttagccagcagtcac
aaagcaacacaaagtacacctgggctgggatccctggctcctgctagtgctgctatgaag
cctggtagtcagttaggtggtgtctccctggcaaatcttgccaaggggcataaacattct
gatcaatctaaacaattacccatcggtaatacatctgcttcaagtacacctaagcctgaa
ggaacgctttgcctgtcagatttactcaaatccaaggtgaccatctcaggatctcggcag
tcatctgtagatagaactccaagtccaaatgatactagcagtagcttcacggcagttcaa
gatgagataactctgttagtcaaggtccagtgtgatgccacattacagtccacaccttcg
atcctcggcaaggcattgtgtttactgaaaactaggaaaaggaaagctagcggttctgat
aagtttagtatgaagtatccaagatttatgtatgctgtccaggctaaaggtgttaaacat
catactccagtacataagagagaggtgaaactgtttgacttctcaactccttcccctgat
gacctcgtccgtcaaagacaacgcggggcctttacccgtaccggggagagacatgtgtct
agttacaggcatcacaaatacagatgtacctatcctgaaagatccaccttcgattttcaa
gtcccagaattccattggaagtgcaacaaattcaatttcgaaagtaactgtgactccaaa
gaaggagcctgtcgaggttttgaacctgtggttgccacatcaaccaagagtgatgataga
cttgcccctcaggtggccacaagctgtgataatgtgactgttggccttggaggagcagcg
gcgagtacgtctgagacgacgctgggagagtcgaccatgccgctggcatccagttctacc
tccagtctcctcacacctaagaaagatccagcgtatcgaccgcctttaccaaggtcatcg
tctaaaagtaaacaaaaaataaatgtacaggaagaatataccaaacggcagggtgagatg
gagctgttgaaccttgtggtgataggtcatgtggatgcaggcaagagcacgctgatgggg
cacctgctgtaccagttgggatctgtcaacaagaaggcaatgcataaatatgagcaggag
tcgaagaagttgggcaagggatcgtttgcgtttgcatgggtgcttgatgaaacagaggag
gagaggacacgcggggtgacgatggatgtggcacagacaaagtttcaaacaccaaagaag
attgtgactctcctggatgctccaggccataaagatttcattccaaatatgatcactgga
gcagctcaagctgatgttgctattttagtgatcaacgccacaaagggagagttcgagact
ggcttcgagaccggtggtcaaacccgcgaacatgcgctactagccagatcactgggtgtt
gcccaaataatagttgctgtcaacaagatggacactgtcgattggtcagaggacaggtat
aatgaggtggtcaagaagattggtcagttcctcaagcaggctgggttccgggaaggggat
gtgtcatttgtgccgtgcagtggtcttggtggcgagaatctcacccaaactgtgaaagaa
cccaagctagcagcctggtacaagggacccacactttccgagcagattgataagtttaag
tcactggaacgaccaatagacaaaccgttccgcctgaatgtaggggatgtgttcaagggt
cagggcacgggcttcaggatctccggaagaataggtgcaggctacatccaggcgggagac
agagccatcgtcatgcctggcaacgtcactgccactgtcagaaatgtatttatagatgag
atgccagttcaggtggcatttgctggtgaccatgtgactatcttgatcagcggaatagac
atagccaatgtaaatatagggagtgtgttgtgcgatccagtcaacccagccaagttttca
actcgaatccgtgccaagatagtcatcttcagcctggaagtgcccatcacacggggctac
ccagtggtgttccactaccagtctgttagtgaaccagctgtcattagacgcctcctagct
cagctcaacaagagtaccggcgaggtggtgaagaagaagcccagatgcctggtgaagaat
accagtgcagtggtggagatcgagctggagaggaacatatgtctggaggaatataaagac
ttcaaggacttggggaggttcatgctgaggtcgggtggagccaccatcgctgctggcctg
gtggaggagattttacctcaaaaagtgaaagaagatcagtga
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integrated database retrieval system
