Haliotis rubra (blacklip abalone): 124264234
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Entry
124264234 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-4-like
KO
K16478
nephrocystin-4
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hrj03037
]
124264234
Cilium and associated proteins [BR:
hrj03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
124264234
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPHP4_C2_3rd
Ig_NPHP4_1st
Ig_NPHP4_4th
Ig_NPHP4_2nd
NPHP4_C2_2nd
Ig_NPH4_3rd
NPHP4_SK
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
124264234
NCBI-ProteinID:
XP_046554926
LinkDB
All DBs
Position
Unknown
AA seq
1486 aa
AA seq
DB search
MMAAKGDEHTRTLHFKNESHDDRINKNSTKSIKGDINYSDTKRLSRLLSWRCVLSHPRPV
TGEVKFDDLVPFCLNLKKVDGIVSPAAAAALVNTRAEYQLSVSLYDVAFRQFCGRQWLGP
TMAGRGGATSLPKLQYNQHVYFHTCITNISLVAVVEIIAHTYDDSGQRQAVACGWGFIRP
FKNNDELPDSARNIQLTTQQKIEMYYGSPRALLFMDDPLESNQLLKPITGCQLSCTVATH
KSMLRVMNLIPENVIVSGKDVIPGVVDDQTAGADKLKRPKMLRTVPMQLEGVFVHLQPNM
DMFETELCTLLQDDRAIREKKTLEDAPPVTVIERRLQVGVHNGWCYVEKPQTFHLESLSS
SSRKPTASPSFRSSSMFTHRRTGSTGSRVKMSLSFARAHTRTVSVRWAAVSPFQHPNKRD
ITISLIGGPHRSPDEGFVYKMPSTDMQDNEAARLAGGYIFLQWSTDAKDMLMLPTGSPRG
MSLPLGSMPSVRSQDSGGELDLAWKPPTGRSNSQGYASQTAGYQVLPGGPRSFPPSEPGA
QHAALPRDHLPYTDQTHISFQPQPQILPQQAGYSHAQPPGMGAVYSNMALGPGSIYGMPM
YPTNIMQMTDPGSVRFTAPDLHELPFTPVHAPVMAQGPQPRGGVGLSRSAYARLYSAGFP
PVVDRNGDPPDVIDPGSTVTVNVAKELADPLQCNEIVFQFLAFAKFSNQPNGSSKSAGSV
FFTFQFYRFPQITSERLLLSKSQNDLTSDPQSMPFILHKMEKDGSVQEGQPPGFEVKYFL
DPTFLKPGESSLFYQHLSRQSLHIDVWDGDSLLLIGSSALDLKYLCRNGNEAVQTTFELD
VVTSEYHEDTMSGDNKHSEVRAASVKPLRRGKLHLRMANIGHQGEVKRIGHRTETIPLPS
KTQVIISQTAGNSSYKGGSLIRGENGLKKLGVSRAQPLTDNREVASMMFSKERLIDKEET
QRGGDSERQRKLSRMNAVRQQSGEQENEKTTTIIGYRKEKAERTRDIKTMEIYRMQTKRE
GILTMLSNTITTEHTIYPTFATAEFFEFVLKNPYNVQQSISMECSDPAVGVITDAREWRH
FKQINNINTHVEEGMFSKESKSNGPEIFLRPKETVNIPLKYQSFHADQSVQPQGPVNPFR
KKEVSHKQGQEESNILHSRSVRIIFKSEDGKPIAVLHLKVEPQPHVVDQTFRFFHPEQSF
LKKSIRLQDLHALPANQIGGSGVSKVYVRCSDTNVVCDSRATQPGEPHDVFVKCPLGPSP
QVKRFHMAVYIDPYLSRPTQVWQFFVHALQRVDVSCIDGQTSRFALILRGTQSNRLCCCF
SSHPNEMQLSPDDQFLLTAGAVHELNVAVRPMKTGNRFYYLNVVDIEYHQLIRTWLICVN
CRAPMVSRAFELSLPVGGGKGCSKRISYTNPYAAQKEFHLSCDRDDLLQFKESKLTINGG
EQHVIGLRFNPVSQPGIAEIMVFINDEDDKNEETFRITANYKYPGA
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagctaaaggtgacgaacataccagaactttgcacttcaagaatgaaagccac
gatgatagaatcaacaaaaactcaactaaatccattaaaggggatataaattactctgac
acaaaacgcttgagtaggttgttgtcatggcgctgtgttctgtcccacccaagacccgtc
actggtgaggtgaagtttgatgacttagttccgttctgtctcaacctgaagaaggtggat
ggaattgtgagcccggcggctgcagcagcgcttgtgaacacccgggcagaataccagctg
tctgtcagtctctacgatgtggcgttccggcagttctgtggccgacagtggctgggaccc
acaatggcagggagagggggagccaccagtctgcccaagttacaatataaccagcacgtc
tactttcacacatgtatcaccaacatcagcctggttgcggtggttgagattatcgctcac
acgtacgatgactcgggacagcgccaggctgtggcatgtggctggggcttcatcaggccc
ttcaagaacaatgatgagctgccagactcagcacggaacatccagctgacaacccagcaa
aagattgagatgtattacggatcacccagagccctgctgttcatggacgacccgctggag
agcaaccagttgctgaagccgatcacaggatgtcagctgagctgcactgttgcgacccac
aagtccatgctgagagtcatgaacctgatcccagagaatgtcattgttagcgggaaggat
gtcatccctggagtggtggatgaccaaactgcaggggcagacaagttgaagcggccaaag
atgttgcgcactgtgccgatgcaactagagggtgtgtttgtgcacctgcagccaaatatg
gacatgttcgagacagaactgtgtaccctgctgcaggatgatcgggcaatccgagagaag
aagacgctggaagatgcaccccctgtcacagtcatagagaggcgattacaggttggtgtt
cacaatggctggtgttacgtggaaaagcctcagaccttccatctagagagtctcagcagc
tcatcacggaaacccacagccagccctagcttccgcagcagtagcatgtttacacacaga
agaactggctctacagggtcaagggtcaagatgtccttgagctttgcccgtgcacacacc
cgaactgtgtctgtcagatgggcagcagttagcccatttcaacaccctaacaagcgagac
attacaatttctctaattggaggacctcaccgatcacctgatgaaggctttgtctacaag
atgccatcaacagacatgcaggacaatgaagctgctaggttagctggagggtacatcttc
ctgcagtggtccactgatgcaaaggacatgttgatgctgccgacaggttctccacgaggt
atgagtcttcccctaggctccatgccatcagtccgtagccaggacagtggaggagagctg
gacctggcctggaagccgcccacagggagatccaattcccaggggtatgcgagccagaca
gcaggataccaggtgttgccggggggaccacgctccttcccacccagtgaaccgggggct
caacatgcagccctgcccagagatcatttgccttatacggaccagacacatatctccttc
cagccccagcctcagatcctaccccagcaggcagggtactcccatgcccagccccctggt
atgggcgctgtgtactccaacatggccctgggtcctgggtcaatatacggaatgcccatg
taccctactaacatcatgcagatgacagaccctggctccgtacgcttcactgcacctgac
ctccacgagctaccattcaccccagttcacgctccagtcatggcccagggaccccagcct
agagggggagttggtttgtccagatcagcctatgctcgactctactctgctggctttcca
cctgtcgtggaccgtaatggcgatcccccagatgttattgaccctggctcgacagtcaca
gtcaatgtggcgaaggagctggcagatcctttgcaatgtaacgagattgtcttccagttc
ttagcttttgccaagttttccaatcagcccaatggttcctcaaaatctgctggctctgtg
tttttcacattccagttctacaggttcccacagatcacttcagagagattacttctgtca
aagtcccagaatgatttgacctcagatccacagtccatgccattcatccttcacaaaatg
gaaaaggatgggtcagttcaagagggacagccaccagggtttgaggtaaaatacttcttg
gacccaacattcctgaagccaggagaaagcagtctgttttaccagcatctctctcgtcag
tccctccacattgatgtctgggatggagactccctcctcctcattggatcgtcggctctt
gacctcaagtacctgtgccgtaacgggaatgaagctgtccagacaacgtttgagctggac
gttgtgacaagtgagtaccacgaggacacaatgtcaggtgacaacaaacactctgaagtc
cgtgctgccagcgtgaagcctctacgccgcgggaagttacatctgagaatggccaacatc
ggacatcaaggagaagtgaagagaatagggcatagaacagaaactattccgttacctagc
aagacacaggtgattatctcccagacagcagggaattcctcctacaagggtgggagtctg
attagaggagagaatggtttgaagaagctgggcgtctctagagctcagccactgacagat
aatcgtgaagtggcctccatgatgttctccaaggaaagactgattgacaaggaagaaacg
caaagggggggcgactctgagaggcaaaggaagctttcacggatgaacgcagtccgccag
caaagtggagagcaggagaatgaaaaaacaacaaccattataggttatcgaaaggaaaag
gcagagaggacgagagacataaagacgatggagatctaccgaatgcagaccaagcgagaa
ggcatcctcaccatgctcagcaacaccatcaccaccgaacacaccatttatcctaccttt
gccaccgccgaattctttgagttcgtcctgaagaacccctacaacgtccagcagtccatt
tcaatggaatgttctgacccagctgttggagtgatcacagatgcacgggagtggcggcac
ttcaagcagataaataacatcaacacacatgtggaggagggcatgttcagcaaggagagc
aaatccaatgggccagagatcttcctgcggccaaaggaaacagtcaacataccactcaag
tatcagagcttccatgccgaccaatctgttcaaccacagggccctgttaaccccttccgg
aagaaggaggtcagccacaagcaggggcaggaggaaagcaacatcctccacagtcgcagt
gtgcggattattttcaaatcagaggatggaaaacctattgctgtcttgcacctaaaggtg
gaacctcagcctcatgttgttgaccagacattccgcttcttccacccggaacagtccttc
ctgaagaaatccatccgactgcaggatctccatgccctgccagccaatcagatagggggg
agtggtgtcagcaaggtgtatgtccgctgcagtgacaccaacgtggtctgcgacagtcgt
gctacacagccaggggaaccacatgatgtgtttgtcaagtgtcccttaggtccatcgccc
caggtgaagcgcttccacatggcagtctacatcgacccctacctgtcccgacccacccag
gtgtggcagttcttcgtgcacgccctgcagagagtggacgtgtcctgtatcgatggccag
accagcagatttgccctcatcctcagggggactcagtccaaccgcctgtgttgctgtttc
tcatctcacccaaatgaaatgcaactgtctcccgatgaccagttcctgttaactgctgga
gctgttcatgaacttaatgttgctgtccgccccatgaagactggcaacaggttctactat
ctaaatgtggtagatatcgagtaccaccaacttattcgtacctggcttatctgtgtcaac
tgtcgggcaccaatggtttcacgggcttttgagctttcactgcctgtgggtggaggcaag
ggttgcagcaagcggatcagctacaccaacccatacgcggcccagaaggagttccatctc
agctgtgaccgtgacgacttgctccaattcaaggagagcaagctgaccatcaacggtggg
gagcagcacgtgattgggcttcggttcaaccctgtttcccagcctggcattgctgaaata
atggtcttcatcaatgatgaggacgataagaatgaagagaccttcagaatcactgccaac
tataagtatccaggtgcatag
DBGET
integrated database retrieval system
