Haliotis rubra (blacklip abalone): 124264951
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Entry
124264951 CDS
T07967
Name
(RefSeq) protocadherin Fat 4-like
KO
K16669
protocadherin Fat 4
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrj04515
]
124264951
Cell adhesion molecules [BR:
hrj04515
]
Cadherins
Cadherin related
124264951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
EipB_like
He_PIG
PepSY
Motif
Other DBs
NCBI-GeneID:
124264951
NCBI-ProteinID:
XP_046555688
LinkDB
All DBs
Position
Unknown
AA seq
2585 aa
AA seq
DB search
MIELTRVISNVLDLSLLDLTCSDGDTGNNALYAVTVASGDGGAGIFKMSGLQLLTDSNPA
DYEALEASGYMYTLVITAVDKPDKRGTNTGTAIVWVTVTPENEFDPVWTSPSNGIGAVDV
DEDSAPGAVISAYQATDSDLGDDGDVTYSIVSVVSASGGDGSDKFTIDAVSGELMVAGEL
DVDTATNGEASYTISVRASDKGVTPRTVDGSITVTLLNTNDNAPTFDQHTFQKSLSEDSA
VDTVVITFNVEDNDGDAVTLSVVSGRDDLFSCDRYDVKVKGALDFETDTTHVLVIRANDG
KYDTDVSLEINVSDVSDEAPVITVTTSSMAEEQTAGSAVDGGYVVTDADARDVVTYSLSG
SDSGYFTIDSTTGELTVAQNIDRDTGKSEVSLTLTVTDQTGLTATKNFTIPLVDINDLPP
VFSPTEYAVEVIENAAPDTSLLDLTCADGDDGNNALFNVLVQHGDDTSTKFKMSGQQLQT
DNLLDYESVESYTLVITAVDTPGQGEANTGTAIVKVTVKPENEFDPVWTAPASDGSGTFS
GISVEEDVAAGSVVATFSATDDDHGNDGVVTYSIVSVTAASGGTVTDKFSVIGHTGDLLV
AGPLDVDVGTNGEASYTIVVKASDNGATPRSVEGTITVSLDNVNDNAPVFDQAEYQTDLS
EDSAVDTVVITFNIQDHDGDAVTLTIASGRDDLFICDGHDVKVKAALDFETDTFYVLVIK
ASDGKFDVEVSLQVDITDVIDEAPVITMATTSSVAEEQTIGTGVDGGYIITDADKQDVHS
YTLSGADSAYLSIDSATGELTVAQNINREGANAKSALSLTLTVTDQAGLQATQDFIITVE
DINDLPPTFNPSVYEIQVTENTAVDSDLLQLTCTDEDAGNNAVFTTSIASGDDTVRKFKM
ADLKLLSDSNAVDFESLEASNYMYTLIITAVDTPDDGNPMTGTAVVKVTVVPENEFDPVW
IAPASSGSGSFHDIVISEDTAVGSVLTTFSATDNDKADDGLITYTITGTNSASGASADNI
FSVDSHTGELIVTGPLDYDTGTNGESNYTVSVKAADSGGTPREIAGTITITLTNVNDNAP
VFDQSEYNTSVAEDSDVGTAVISLNNVDFDGDDVTLSISTGRDDLFECDGNDIVVKATLD
FETDKVHILIIRASDGVHETDVTVKIDITDATDETPVITIATTSSMAEEQTVGTPVEGGY
VVTDADEHDVLTYVLSGVDSPYLTIDSSSGDLSVAANVDREGTNAKTELSLTLTVTDLAG
LQAIQDFTITVEDINDQHPVCDPSVLEVEVTENMAGDTEVLDFICVDSDIGSNAQFGLTL
ASGDDTPNKFKVSNSKLLTDSTNLDYEALEAQWTHQTRGEANTGTAIVKVAVKPENEFDP
VWTGPASDGSGTFTGVSVSEDEEPGFVITTFTATDDDHSDDGVVTYSVVSITAASGASVP
DIFIIDAHTGELIVADDLDVDAGTNGEASYAIVVKSSDNGATPRSVEGTITVSLDNVNDN
APVFDQAEYQTDLSEDSAVDSVVITINTDDFDGDSVTLSITSGRDDIFKIDGSDVTVKAA
LVDYESAQSHLLYIMATDGTLESRVSLHLTVLDVVDEAPVIAIDTSGTMSEGQAIATGVQ
GGFRVTDPDQQDVLLFALTGADSHYLNIDSATGDLSVAEHVDRDGVGGVTELTGLILTVT
DQAGLQDTKDFTVTVVDINDHAPVFDPAEYSIEITENTATDTSLLDFVCSDGDSGNNAVF
VMGVGDGDDSRTKFKISGQQLQTDVNLVDYDSLEASGYMYTLVITAVDTPDQGEANTGTA
IVKVTVKPENEFDPVWTGPASDGSGTFVAISVKEDLAPGDVAVTFTAVDDDLGNDGDVSY
SIVSVTAATGRLLVAGKLDVDSATGGVSSYTVVVKASDNGQTPRETQGTITVSLENVNDI
APVFDQTDFETSVDEDAAVDVVVMSLAVVDHDGDAVTLSIASGRDDLFLCDGYDVKVKAA
LNFEEEAIHILVVRASDGTFTTDFTVHVSVNDVIDEAPVITLEGTASMAEGQVVGTGVDG
EYAATDADAGDTLTFSLSGTDSGYLSIDPATGELSVNQTVDREGADGKTALSLTLTVTDQ
AGLQATKDFTITVEDINDLPPVCDPAVFVTEVTENTAEDAVLLVLTCTDDDDGNNAIFRV
SIGSGDDTDPKFKMSGKQLLTSSTPLDYESLKDNDYMYTLVITAVDTPDQGEANTGTAIV
KVTVKPENEFDPVWSDPLPDANGYFNDVTVDEDAAPGTAITTVTATDDDQADDGVVVYEI
TSITVDDGSDALGTFVIGYDTGDLQVKSGLDAEGGITRYDISIRAVDLGTAPKDVTASVK
VYVNNVNDMAPVFSDTKYQIVVYENVTTDSAIFTLAATDPDGDDVTFALEGTSDLFEVRG
EEVIILKTLDFETDRYHSTIISAGDGIHTTYVSFVVNVGNVMDEPPSITAPGFSIPEGQL
IGTVLGDVFIIDDPDLGDVFKYTLSGTNAHMLSVNEDTGELSINESIDYEGGMTVLEDVT
LTVTDQGGQSTNSDLRFPIWDINDNAPLFANLSYTASVTEGDLGGMYTSQKASSYRVFVK
RYWLP
NT seq
7758 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaacttaccagagttatttcaaatgtattagatctctcgttgttggatctgact
tgttccgatggggatactggaaacaacgctctgtatgccgtcacggttgccagtggagac
ggtggggcaggtatcttcaagatgtccggacttcagcttcttacagactctaaccctgct
gactatgaagctctagaagcatcaggctacatgtacaccctggtcatcacagcagtggac
aagcctgacaagaggggcaccaacacaggaacagcaattgtatgggttacagtgacacct
gaaaatgagtttgaccctgtctggacatccccaagtaatggcattggtgctgtagatgta
gatgaagactcagctccaggtgcagtcatatcagcttaccaggccactgacagtgactta
ggtgacgatggagatgtcacctacagcattgtgtcagtagtgagcgcatcaggcggagat
ggatccgacaagttcacaatagatgctgtatcaggagagctgatggtggctggagagctt
gacgtagacactgctactaatggagaggctagttacactatcagtgttagggcttcagac
aagggggtgactccacgcacagtggatgggagcatcaccgtgacgttgctgaacaccaat
gacaatgcacctacatttgaccagcacaccttccaaaaaagcctcagcgaagacagtgct
gtggatacagttgtcatcaccttcaacgtcgaggacaatgacggtgatgctgtgacattg
tctgtagtcagtggacgagatgacctgttctcgtgtgatcgatatgacgtcaaggtcaag
ggtgcgctggattttgaaacggacacaacccacgttcttgtaataagggctaacgatggt
aaatacgacactgatgtatcactagagatcaatgtttccgacgtctctgacgaagcacct
gtcatcaccgttacaacaagctcaatggcagaggaacaaacggcagggtcagcagtggat
ggaggatatgttgtcacagatgccgatgctagagacgtcgtgacgtattctctgtctggt
tccgatagtggctatttcaccattgattcaacgacgggagagttaactgtggcacagaat
attgaccgagatacagggaaaagtgaagtgtctctaaccttaactgtcactgaccagact
ggacttactgccaccaagaatttcaccatcccacttgtggacataaacgatctccctccc
gtgttcagcccgacagagtatgctgttgaagtcatagaaaatgccgctcccgacacgtcg
ttgttggacctgacatgcgcggacggtgacgatggaaacaatgcattatttaatgtcctt
gttcaacatggtgatgacacatctacaaagttcaagatgagtggtcagcagcttcagacg
gataacctgttggactatgagtccgtggagtcgtacaccctggtcatcacagcagtggac
acaccaggccagggagaggccaacacggggacagcgatagtgaaggtgacggtcaaacca
gagaacgagttcgaccctgtgtggacagcacctgcttcagatggaagtggaacatttagc
gggataagcgtggaagaagacgttgctgctggtagtgttgtggcgacgttctctgccact
gatgatgaccatgggaatgatggtgtcgtcacctacagcatcgtctcagtcactgcagct
tcaggtggaacagttactgataagttttcagtcattggccacacaggagatttactggtg
gcaggccctttagacgttgacgtaggaaccaacggggaggcgagttacaccattgtagtg
aaggcatcggacaacggcgccacgccgcgctctgtggaaggaaccatcactgtctccctc
gacaacgtcaacgacaacgctccagtgtttgatcaggcagagtaccagacagatctcagt
gaagacagtgctgtggatacagttgtcatcacattcaacattcaggaccacgacggtgac
gctgtgacgttgacaatcgcaagtggacgcgatgatctattcatttgtgacggtcatgac
gtcaaggtcaaggctgctctggatttcgaaacagataccttctatgtacttgtaattaag
gctagtgatggaaagtttgatgtcgaggtctcacttcaagtagacatcactgacgtcatc
gacgaagcacctgttatcaccatggcaaccacaagttccgtagcagaggaacaaacaatc
ggtactggagtagatggagggtacatcatcacggatgctgataaacaggatgtccactcc
tacactctcagtggagctgacagcgcctacctcagcattgattcagccacaggtgagctg
acagttgcccagaacatcaacagagaaggggccaatgctaaatcagccctgtccctcaca
ctgaccgtcactgaccaggccggactccaggccacccaggacttcattatcacagttgaa
gacatcaacgacctcccgccaacattcaacccatctgtgtacgagatccaggtcactgaa
aacactgctgttgactctgacctgctgcagctcacctgcactgacgaagacgctggcaac
aatgctgtattcacaacgtcaatagccagcggggacgatacagttcggaagttcaagatg
gctgatctgaaactactatcagattctaatgctgttgactttgagagtctggaagcctca
aactatatgtacaccctcatcattactgcagtagacacacccgatgatggcaatcccatg
acaggaacagcagtcgtcaaggtgactgttgtacctgaaaatgaatttgaccctgtttgg
atagcgccggcttcaagcggaagtggtagttttcatgacattgtcatatctgaagataca
gccgttggttctgttctgacaacatttagcgctactgacaatgacaaggcagacgatggc
ctcatcacttacaccatcacaggaacaaattcagcttctggagcttctgctgacaacatc
ttctcagtagacagccacaccggagagttaattgttacgggaccattagactacgacact
ggtaccaatggtgagtccaactatacagtctcagtaaaggcagcagacagtggaggtacc
cctagagaaatagctggcacaatcaccataacactgaccaacgtcaacgacaatgcccct
gtctttgaccaaagtgaatacaacaccagcgtcgccgaggacagtgatgttgggacagct
gtgatttccctcaacaacgtcgactttgacggtgatgatgtcaccctgtccatctctact
ggtagggatgacctgttcgagtgcgacggaaacgacatcgtcgtcaaagctaccctagat
tttgaaacagacaaagttcacattcttataataagggcatctgatggagtacatgaaact
gatgtgactgtcaagattgacataacagatgcaacagacgagacgcccgtcatcaccata
gcaaccacgtcttccatggcggaggagcagacagttgggactcctgtagagggaggttac
gtcgttacagatgctgatgaacacgatgtccttacttatgtcttaagtggtgttgatagt
ccctaccttaccatcgactcatcatctggcgacttgtcagttgctgccaatgttgataga
gaaggaaccaatgctaagacggaactgtctctcaccttgaccgtaactgacctggctgga
ctacaagcaatacaagacttcacgatcacggttgaggacatcaatgatcaacatccagtt
tgtgacccgtctgtgttggaagtcgaggtcacggaaaatatggctggagataccgaggtc
ctggattttatatgtgttgacagcgatatcggcagcaacgcccagtttggcttaacctta
gcgagtggggatgatacccctaataagtttaaagtttcaaactctaaactcctcacggac
tctactaaccttgactacgaggctttagaagcacagtggacacaccagaccaggggggag
gccaacacggggacagcgatagtgaaggtggcggtcaaaccagagaacgagttcgaccct
gtgtggacaggacctgcttcagatggaagtggaacatttacgggagtgagtgttagtgag
gatgaagaaccagggtttgtgatcacgactttcacagccactgatgacgaccacagtgac
gacggggtggtcacgtactcagttgtctccatcactgcagcttcaggtgcatctgtaccg
gacatattcatcatagatgcccacacaggagaactcattgtggctgatgacttagacgtt
gacgcaggaacaaacggtgaggcaagttacgccattgtagtgaagtcatcggacaacggc
gccacgccacgctctgtggaaggaaccatcactgtctccctcgacaacgtcaacgacaac
gctccagtgtttgatcaggcagagtaccagacagacctcagtgaagacagtgctgttgac
agtgtcgtgataactattaacactgacgattttgatggcgattctgtgacactgtcaatt
acgtctgggagggatgacatattcaagattgatggaagtgatgtgacggtcaaggctgca
ttggtcgattacgaatccgcccagagtcatcttttatacatcatggcgactgatggcacg
ttggagtcccgagtgtcactgcacctcacggtgctggacgtggtagacgaagctcctgtc
atcgccatagacacctcaggaaccatgtccgagggtcaagctatagctacaggagtacaa
ggagggtttcgtgtcaccgatccagatcaacaggatgtgctattatttgcattaacaggt
gcagatagtcactacctgaatatcgactccgcaaccggcgacctgtcagtagcggagcat
gtcgacagagacggggtgggtggcgtcacagaactgaccggactcatactgacggtcacg
gaccaagccgggctccaggacacaaaggactttaccgtcacagttgtcgacatcaatgac
cacgcccccgtatttgacccagcagaatacagcattgaaatcacagaaaatactgctacg
gacacttccttgttggacttcgtctgctctgatggtgactctggcaacaatgctgtcttt
gtcatgggtgttggagatggggacgattctcggacaaagttcaagatatctggtcagcaa
ctccagacggacgttaacctcgtcgactacgatagtctagaagcatcaggctacatgtac
accctggtcatcacagcagtggacacaccagaccagggggaggccaacacggggacagcg
atagtgaaggtgacggtcaaaccagagaacgagttcgaccctgtgtggacaggacctgct
tcagatggaagtggaacattcgtcgccatctccgtgaaagaggatctagctcctggcgat
gttgcagtgactttcactgctgttgatgacgatctcggcaatgatggagatgtttcatac
agtattgtgtctgtaaccgctgcgacaggaaggttgttggtggcaggcaaacttgacgtg
gattccgctactggaggggtgtccagctacacagtcgtggtcaaggcttcggacaatggt
cagacaccgcgtgagacacagggaaccattactgtatcgctagagaatgtcaacgacatc
gcacctgtgtttgaccagactgatttcgaaacatccgtcgatgaagacgcagctgtagac
gttgtggtgatgtctcttgcagttgttgaccacgatggtgacgctgtgacgttgtctatc
gccagtggacgagatgatctgttcctgtgtgacggatatgacgtaaaagtgaaggccgct
ctgaatttcgaggaggaagctattcatatcttagtcgtacgtgcatctgatggcactttc
accacggatttcaccgtgcacgtcagcgtcaatgacgtcatagatgaagctcctgtgata
accttggaagggacagcgtcgatggcggaaggccaggttgtggggacaggggtggatgga
gagtatgccgccacggatgctgatgctggagacacacttactttctccctcagtggtacg
gacagtggctacttgtccatagacccagccactggcgagctctctgttaaccagaccgtt
gacagggagggagctgatgggaaaactgcgctgtccctcacactgaccgttactgaccag
gccggactccaggccaccaaggacttcaccatcacagtagaggacatcaatgatctacct
cctgtgtgcgatccagctgtcttcgtaacggaagtcacagaaaacactgcagaagatgct
gtcctacttgtcctgacgtgcactgacgatgacgacggtaacaacgccattttcagggtg
tccataggcagcggagatgacacggaccccaagttcaagatgtctggaaagcagttattg
acgagcagcaccccgttagactacgagtcgttgaaggacaatgactacatgtacaccttg
gtcatcacggcagtggacacaccagaccagggggaagccaacacggggacagcgatagtg
aaggtgacggtcaaaccagagaacgagttcgaccctgtgtggagtgacccgttaccggac
gccaatggttacttcaatgacgtcacagttgacgaagacgctgctccggggacggcaata
acgacagtgacggcgactgatgacgatcaggccgacgacggagtggttgtgtatgagatt
acttcaattacagttgatgacggatccgacgctctggggacatttgtcatcggttacgac
acaggcgaccttcaagtcaagtctggacttgatgctgagggcggcatcacccgctacgac
atttcaatccgcgccgtagacctcggcaccgctccaaaagacgtgactgcctcagttaaa
gtatacgtcaacaacgtgaacgacatggctccagtgttctcagacacaaagtaccaaata
gtggtgtacgaaaacgtcaccaccgattccgccatctttacgttagcggcgaccgatcct
gatggagacgatgtcacgtttgcgttagaaggcactagtgacctgttcgaggttcgagga
gaggaggttattattctgaaaacattagattttgagactgacagataccactccaccatc
attagcgctggtgacggtattcacaccacctacgtatcattcgtcgtaaatgtcggtaac
gtcatggacgagccgccctccatcacggcgccgggtttctccataccagaggggcagctc
attggcaccgtgcttggagatgtcttcattatcgatgaccctgacctcggagacgttttc
aagtacaccctttccggtactaatgcacatatgctgtccgtcaatgaagacacaggagag
ttatctattaatgagtccatcgattacgaaggcggcatgactgtgcttgaagacgtgacc
ttgaccgtgacagatcaagggggacaatcaactaactcggatcttcggtttcccatctgg
gatattaacgacaacgcgccactgtttgccaatctgtcgtacactgcatctgttacagaa
ggtgacttgggcggtatgtatacgtcccagaaagcctcctcataccgtgtatttgtcaag
cggtactggttgccgtag
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integrated database retrieval system