Haliotis rubra (blacklip abalone): 124265136
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Entry
124265136 CDS
T07967
Name
(RefSeq) protocadherin alpha-4-like
KO
K16498
protocadherin delta 1
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
124265136
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hrj01009
]
124265136
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrj04515
]
124265136
Protein phosphatases and associated proteins [BR:
hrj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124265136
Cell adhesion molecules [BR:
hrj04515
]
Cadherins
Protocadherins
124265136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
124265136
NCBI-ProteinID:
XP_046555887
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MGLKMYVVILTTVLISTCVSQDLTFRIDEEQQAGTFVGRISDATDLQSALSDDAMRTLRY
SFLTQGYPYSALFTIHNTTGEIYTALKLDREDICGFSFQCVLDLEVAVQSSTSQYFRKIW
TSVYLQDINDNKPVFPKPSIDLEISEAVSINSSLAIDGAVDKDIGNNSLQSYELTPYDSP
FTLHVVSRLDGGTIVSLVVRHALDRETASSHQITIFAKDGGNPASTGSVSVTVDVIDVND
NAPVFSPASYNVTVRETTLEHTAIFRVTATDTDIPENGVAYYRFSPLQSGNVKRYFDVND
TTGEVTVVSSLEGAQGERFMFYVECVDGGSPPLISQATVEIYVEDTINSPPSINLNLLYG
GLVSEYAQPGTVVAHIAVLDLDSGRNGIIRCNIVSVMFELQGLDVNEYKVIVVRPLNSEV
TKEHYVTVTCQDAGNPPLNTTIDFTVLVKDENDNSPVFSKDVYTASVVENVKGVVITRVR
ASDKDSGSNGEIDFIIPYADKMGLDVLKTGEVISAVEFDREFMPKMAVPIVARDRGNPPR
NATATLMITVDDVNDVEPSFQSSLYKFKVMENRAPGTEIDKVHALDLDTGVNGEVVYSID
DNSDDPPIEILPGGQLRTTRRLDREMVKEFRVKVWAKDKGVPVLSSSTTVVVEVGDENDN
PPKIQSPDPVNSSIAIPYHTSPGSPILSVVANDADEGINARFQFYVARGQRRVPPTWEDR
ETNTGVETDTFGINSHTGELLLKRKLSEEDVGKYRMVIIVTDQGIPQLSSNATLEVYIFA
SNETYYDGPGMSEENAIVVVILGSLTGIVTVVVIVTILIIKRADRARKTPRGDSVPQLPT
PAENEQVKVKTHDAIVIRNDISFDSQASSHMSIDSHGKLILGPGDGTQNTQPGDDGMYPG
NTTADEWSTALKIHKDLLRMHGVDSNTPRRSSDDANSDTSGETTTSDSGRGGSDEDSHGR
ASPVTQKVSTTLSSRQMYRQKKASDYVKGLGKMSTNSFGGTIGNSFEKIPNASQSNIRSS
SQRPAKHVTFQSDLPVDRNFMESDDFNDGPFYVNGHTENSRGMFSDDVNLSFDANDDDTT
TSGSYTVDDHLSNDITIPRMNDVLV
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgaagatgtatgtcgtgatattaacaacagtgttgatatctacatgtgtcagt
caagatttgacatttcggatagacgaggaacaacaggctggaacatttgttggaaggata
tccgatgccactgatttgcaatcagcattatcagacgatgcaatgagaactctacgatac
agcttcctcacgcagggatacccgtacagtgccttgttcactattcacaacactacaggt
gaaatctacacggcgctgaagcttgacagggaagatatttgtggcttttcatttcagtgt
gtgttagatctagaagtggcagttcagtcatcgacaagtcaatatttcagaaagatatgg
accagtgtctatctgcaagatatcaatgacaataagcctgtgttcccgaaaccatccata
gatctggaaatatcggaagctgtttccatcaactcatctttggctattgatggggctgtt
gataaagacattggtaacaactcgcttcaaagttatgaacttacgccctatgacagtcca
tttacactccacgtggtcagccgtttagatggtggaactatcgtcagcctcgttgtaagg
cacgcgctggacagagaaactgccagcagtcatcaaatcacaatctttgcaaaagatggc
ggaaatcctgcctccaccggcagcgtcagcgtgacggtcgacgttattgatgtcaacgac
aacgctcccgttttctcccccgcatcttacaacgtcacggtacgagaaaccacactggaa
catacggcaatcttcagggtgacggcaacggacacggacatcccagagaacggcgttgcc
tactacaggttcagcccgttacaatcgggcaacgtaaaacgctatttcgacgtcaacgat
acgacaggagaggttactgttgtctcttcccttgaaggggcccagggagaaaggtttatg
ttttacgttgaatgtgtggatggtgggagtccacctttaatatctcaagccaccgttgag
atatatgttgaagatactattaacagcccaccatccattaacctcaatctactgtacgga
ggcctggtatctgaatatgctcagccaggcaccgttgtcgcccatattgccgtccttgac
cttgattctggcaggaatgggataattcgttgcaacattgtcagcgtgatgttcgaactg
caaggacttgacgttaatgaatacaaggtaatcgtcgtgaggccgttgaacagtgaagtg
acgaaggagcattacgtcacggtgacgtgtcaggacgcagggaatcctcctctcaacact
actatcgacttcacggttcttgtcaaggacgaaaacgacaactcgcctgtgtttagtaaa
gatgtgtacaccgcctctgtagtcgagaatgtcaaaggagtcgtgataacaagagttcga
gccagcgataaagattcaggctcgaacggggaaattgacttcattataccctacgcagat
aaaatgggacttgatgtattgaaaactggggaggtgatctctgctgtcgaattcgatagg
gagtttatgccgaaaatggcagttccaattgtagctcgagatagaggtaaccctccgaga
aacgcgacagcgacgttgatgattaccgtcgatgacgtgaatgacgtggagccaagcttt
cagtctagtttgtacaagttcaaggttatggagaaccgcgcgcctgggactgaaattgac
aaggttcatgctttggatcttgataccggggtgaatggtgaagttgtgtacagcattgat
gacaactctgatgaccctccgattgaaatcttgcccggtggtcagttgcgtactacccgg
cgtttggaccgcgagatggtcaaggaatttcgggttaaggtatgggcaaaggacaaaggc
gtgcccgttctaagtagctcaactaccgtcgtagtagaagtcggtgatgaaaatgacaat
ccgccgaagatacaatctcccgatcctgtcaactcgtcaatcgcgatcccctaccacaca
agccctggatcacctattctatccgttgttgctaatgatgctgatgaagggatcaacgct
cgttttcagttctacgtggccagggggcaacgccgagttcccccaacttgggaggatcgg
gaaacaaacactggggtggagaccgacacgtttggtatcaatagccacacgggggagtta
cttctgaaaaggaaattatcagaggaagatgtcggcaaataccgaatggtcatcatcgtc
actgatcaaggcattccacagttaagttccaatgccacgctggaggtgtacattttcgcc
agcaatgaaacgtattacgacggtcctggaatgtcagaggaaaacgccatcgttgtggtc
atccttggcagcctcaccggcatcgtcaccgtggtggtgattgtcacgatcctcattata
aagcgggcggacagggctaggaagactccacggggggattctgtaccacagctcccgacc
cctgctgaaaatgaacaagtgaaggtgaagacgcacgacgccatcgtcatccgcaacgac
atctccttcgactcccaggcttccagtcacatgtcgatagacagccatggcaagctgata
ctagggcctggagatggcactcagaatacccaacctggcgacgacggcatgtatcctggc
aacaccacggcagacgagtggtcgacggcactcaagatccacaaggatctgctaagaatg
cacggcgtggattctaacactccaagacgcagcagcgacgatgccaacagcgatacgtca
ggggagacaacaaccagcgacagtggtcggggcggaagtgacgaggatagtcacggacgt
gcatctccagtcacgcagaaagtgtctacaacgttgtcttcccgccaaatgtaccgccag
aagaaagcatctgactatgtgaaaggactcgggaaaatgtcaactaattcatttggagga
accatcgggaacagtttcgaaaaaattcccaatgctagtcagtccaatattcgatcatca
agtcaacgccctgctaaacacgtgacattccaatcggatcttcccgttgacagaaacttt
atggagagtgacgatttcaacgatggccctttctatgtaaatggtcatacagagaattcc
aggggaatgttttccgacgatgtgaacctcagtttcgacgccaacgatgacgacactacg
acgtcgggaagctacacggtcgacgaccacctgtctaatgatattacaattccaagaatg
aatgatgtccttgtgtaa
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integrated database retrieval system
