KEGG   Haliotis rubra (blacklip abalone): 124265294
Entry
124265294         CDS       T07967                                 
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 8 homolog
  KO
K20178  vacuolar protein sorting-associated protein 8
Organism
hrj  Haliotis rubra (blacklip abalone)
Pathway
hrj04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:hrj00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    124265294
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hrj04131]
    124265294
Membrane trafficking [BR:hrj04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    124265294
SSDB
Motif
Pfam: Beta-prop_VPS8 TPR_Vps8 VPS8_N zf_RING_Vps8 TPR_Vps41 Beta-prop_WDR36-Utp21_1st Clathrin WD40_CDC20-Fz TPR_VPS8_2 Beta-prop_WDR5 zf_RING_Vps8_fungal WD40_Prp19 Beta-prop_THOC3 WDR55 Beta-prop_WDR3_1st ANAPC4_WD40 zf-RING_Vps41 Beta-prop_EML EIF3I Beta-prop_EML_2 Beta-prop_WDR3_2nd zf-C3HC4 Beta-prop_DCAF4 WD40 zf-RING_5 Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 zf-RING_UBOX Beta-prop_HPS5 PHD_NSD Beta_prop_At2g24240 Beta-prop_SPT8 Beta-prop_RIG_2nd zf-rbx1 DNMT3_ADD_GATA1-like Beta-prop_NWD2_C PHD
Other DBs
NCBI-GeneID: 124265294
NCBI-ProteinID: XP_046556039
LinkDB
Position
Unknown
AA seq 1398 aa
MADDARSATDASSNLINFDIDELDDAELDLPAVESTPTLESILNEPDDSSSVLDEEEIPP
SAVQLFKADSGETSSISSQDSYLNDRPRQRRDRGKKTSKPIHGSVLKPSKLKNISAQILS
AADRVDAGMPTAITVSALIAIGTSHGLVLVFDPKQVLKWCLGSTAVGAQYGAVSSLSFNK
DCTRLLSGFAKGQITMWDLTTGKLLRTITDAHPQGTAVLHVEFTDSFVLAVCSDSGGSVF
ELEFKRLIGVRTCESQCLFSGSRGEVCVIEPLHMNLTIKDHPMQDVMVLAMASLSKVLLV
TLRPTLKVMFTHPLKGDPSTLPLLAWQFVIIQVSERDRVIDPVLVFARDQTIYFYQVICH
GPQDIRCSGLQKMEVSYQLLSVKWMNPRTIVTLDKSEKLHVIDVRSEEELEVIDISEVQL
VYGTSYFKSLATGGNVSLALAYAGEQACYQSITSHGGQLFLQGTRNVHVFTLRTWKERLE
VLVKQNKYQEALALALSFYEGKAKAVVGLTGSQKQRKELVAHLMLDLLFNYVDLSMTRLC
PEKGKIEELEEYYQEIVPVCVDYSLHLQRTDILFGRIYDRFGEDVIAQGTFLECLEPYIL
GDKLTSIPPSVMKDFVGHYETREMLDNVEACIVHLDITSLDIHQVVHLCWDHGLYDAIIY
VYNKGMYDYTTPLEELLLLLTSAVKTGKQLTDSQIKLGNKLLVYISCCLAGRAYPFGDIP
EEHVEEVKEKVFMTITCLHTSKPTEDEPAYPNLRSLLQFDTREFLNVLALAFEESEFNSE
KGIAKRQRVVDILLQIMVESVGFTPTQVGILFTFLARQMARHENTIIVNRVLFEQVLEFL
SNPEDESRHEERQQALMELIHAGGLQQFDEGRLLRLAENAKFYRVSEYLYEKRREYDKIL
GCYLRDPSRRYHSFSYIESIIQSDRYTAVEKGSVRTEALKNLQELVSIDCKQAAQTVITC
LADNLSDVVRKLQNKPTVLFEFLQGVISYRDSQSSAVHTDRQITIEPNIIELYINLMCEH
RPHDVCSFIKMNEGYRLEETLEICRKHKASEATAYLLEKAGDIQGAFGIVLENMQSKIKC
LMEVLESREKSQRDPVVLFQEVEAILLVIIQLCQRNSGKMDEAGREALWFPLLENIMSPQ
KRMKDTANKQIIEDFKQMTHHVLNSMMGYISPPAILKKIMQDPTYNTGKFGEVKELIIGM
LENYNYEQTLMKACKNLLYHDLHVHLRSLTGAASRGFVPRGDSCHLCNRNFVNPSDTDPV
SVFRCGHSYHIACLRVLGSIHVIDGEETWVCYLCSNAKRTGRLHSSRFHRSLSNPSQAAL
HKQEKSKSKESALDPQHAQAFESVRRAMKTPSRLAILTELASGEPSGRRKGYNRTASSIF
QNETFKLKLAPPIAMELA
NT seq 4197 nt   +upstreamnt  +downstreamnt
atggcagacgatgctagatccgcgactgatgccagctcaaatcttatcaactttgacatt
gacgaactggatgatgctgaattggatctcccagctgtagaaagcacaccaacattggaa
agcattcttaatgagccagatgactcatcctccgtcttggatgaagaagagatccctccc
agtgctgtccagctatttaaggctgattcaggggaaacttcctctatcagttcacaagat
agttatctcaatgaccgacctcgtcagcgccgagacagaggtaaaaagacctccaagcca
attcacggctctgtactcaagccgagcaagctgaagaacatatcggcacaaatcctgtct
gctgcagatcgtgttgatgcagggatgccaacagctataactgtctctgctctgattgct
attggcacatcccatggtctagtcctggtgtttgatcccaaacaggtcctcaagtggtgc
ttagggagcacagctgtaggggctcagtatggtgctgtgtcttccctcagtttcaacaag
gactgtacaagactgctgtctggctttgcaaagggacagattaccatgtgggacctgaca
actggcaaactgctgcgaacgatcacggacgctcatccacaaggcacagctgtacttcac
gtagagttcacagacagctttgtattggcagtatgtagtgacagtggaggctctgtgttt
gagctggagtttaaacgcttgattggagtgagaacttgtgagtcccagtgcctgttttct
ggaagccgtggtgaggtgtgcgtgattgaacccctccacatgaacctaaccatcaaagac
catccaatgcaggatgtcatggtgttggcaatggcatctctctcaaaggttttactggtg
acgttacggcctacacttaaagttatgtttactcatcctttaaagggcgacccaagtaca
ctaccactgttggcgtggcagtttgtgatcatccaggtatcagagcgagaccgggtcatt
gacccagtgctagtgtttgctcgtgaccagacaatctacttctatcaggtaatctgtcat
ggaccccaagacattcgctgttcaggtctacaaaagatggaggtctcataccagcttctc
agtgtcaaatggatgaacccacggactattgttactctggacaagtccgagaagcttcat
gtcattgatgtgagatctgaagaggagctggaggtgattgacatttctgaggttcagcta
gtatatggcacaagttacttcaagtctttggccacaggagggaatgtcagcctggcccta
gcttatgcaggagagcaagcctgctaccagtcaatcaccagccatgggggacaactcttc
ctgcaggggactcgcaatgtgcatgtcttcaccctcaggacttggaaggagaggcttgag
gttctggtgaaacagaacaaataccaggaggctctggcactggctctgtccttctacgag
gggaaggcaaaggcagttgttggactgactggatctcagaagcagaggaaagagttagta
gcccatctgatgctggacctgctgttcaactacgtggatctgtccatgacccgcctgtgc
cctgagaagggcaagatagaggagctggaagagtattaccaggaaatagttccagtatgt
gtggattactccctgcatctccagagaacagatattttgtttggccgtatttatgaccgt
tttggtgaagatgtgatagcacaaggcacattcctagaatgtctggagccatatatactt
ggtgataagctcacatccattccgccatcggtcatgaaggattttgtcggccattatgaa
actcgggagatgttggataatgtagaggcctgtattgttcatctggacatcacaagtctc
gacattcatcaggtggttcacctgtgctgggaccatggcctgtatgatgccatcatctat
gtgtacaacaagggcatgtatgactacacaacacccctggaggagttgttgctgttactg
acgtcagctgtgaaaaccggcaaacagctcacagatagccagattaaacttgggaataaa
ctgctggtctacatcagctgctgtctggctgggagagcctacccctttggagacattcca
gaagagcatgtggaggaggtcaaggaaaaggtgttcatgacaatcacatgtctgcataca
tcgaagcctacagaagatgagccggcctaccccaacctccgctcactgctgcagtttgac
accagagagttcctcaatgtcttggcactggctttcgaggaaagtgaattcaattccgag
aaagggattgccaagcgacagagggtcgtggacattctgctgcaaatcatggtggagagt
gtgggttttacgccaacacaagttggaatcctcttcacattcctggctcggcagatggct
agacatgagaacaccatcattgtcaacagagtgctgtttgaacaggtgttggagttcctc
tcaaatcctgaggatgaatctcgccacgaggagagacaacaagcactcatggaactgatc
catgctgggggactgcagcagtttgatgaagggagactactccgtcttgcagaaaacgct
aagttttaccgtgtgagtgaatacctatatgagaagcggcgtgaatatgacaagatcctt
ggctgttatctacgggatccctccagacggtaccattccttcagttacatcgagagcatc
attcagagtgacagatacactgctgtagaaaagggctcagtcaggacagaagctctcaaa
aatctacaggagctggtgtctatagactgcaagcaggctgctcagactgttattacatgc
ctggctgataacctcagcgatgtcgtcaggaaactgcagaataaaccaactgtcctgttt
gagtttctacaaggagtcatatcctacagggactctcagagcagtgctgtccacacagat
cgccagatcaccatcgagcccaatatcatcgagctgtatatcaaccttatgtgtgagcac
cgtccccacgatgtgtgcagcttcatcaagatgaatgaaggctatagacttgaagagaca
cttgagatatgcaggaaacacaaggcgtctgaagccacagcgtaccttctggagaaggca
ggagacattcaaggagcgtttggcatcgtcttggagaacatgcagagcaagataaaatgt
cttatggaggtgcttgaatcaagggagaaatctcagagagatccagttgttctgttccaa
gaggtggaggccatcctgttggtcatcattcagctctgtcagcggaactctggcaagatg
gatgaagctggacgtgaggctctgtggttccccctgctggagaacatcatgtccccccag
aagaggatgaaagatacagcaaataaacagatcatagaagatttcaagcagatgacccac
catgtattaaacagcatgatgggatacatctccccaccagccatactgaagaaaatcatg
caggacccaacctacaacactggtaagttcggggaggtgaaggagctcatcatcgggatg
ctggagaactacaactatgaacagaccttgatgaaagcgtgcaagaacctactttatcat
gatctacatgttcatctgcggagtctgaccggtgctgcaagtcgaggctttgttccacgt
ggtgacagctgccacctgtgtaaccgcaactttgtcaacccctcagacacagacccagtg
tcagttttcaggtgtgggcacagttaccacattgcttgtctgagggtgctggggtctatc
catgtgatagatggagaggagacatgggtgtgctacttgtgcagtaatgccaagagaaca
ggtcgactacacagctctcgcttccaccgatctctctccaacccgagtcaagctgctcta
cacaagcaggagaagtccaagtcaaaggagtcggcacttgatcctcaacatgctcaagcc
tttgaaagtgtccggcgagcaatgaagactccatcaaggcttgcaatccttacagagctt
gcaagtggagaaccgtcagggcgaaggaagggctacaacagaactgcttccagcatattc
cagaatgaaactttcaagctcaagctggctccacccatagctatggagctagcataa

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