Haliotis rubra (blacklip abalone): 124265531
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Entry
124265531 CDS
T07967
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124265531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrj03041
]
124265531
Spliceosome [BR:
hrj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124265531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
PRP4
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_EML
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Ge1_WD40
Beta-prop_EIPR1
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
124265531
NCBI-ProteinID:
XP_046556273
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MSDDEVDLPVPKRSKVLHYGSLEDQERRRINNDDTSGSMANDAIEAGIEAGNINITEGGH
FDIDEAEAESQAEVLAQFEKRKRARQIQVSTDDSEVKANLRQLGEPICLFGEGPAERRER
LRQLLARLGEDAVKKKKEEKLQEQRKKEEENITWYHEGTESLKDARYWLSDYSIPREKER
VSRERESKLTPMAQKNAQMQELQKRIRSVTNDCSQIGDDRPLSHCQFSPDSQMLAVASWS
GLCKLWSIPDCQLIRQLRGHNCHVGAIVFHPDATIGLDNSVCCMASCGQDGSVKLWNLVS
DEPIADIEGHAPFRVSKLAYHPSGRFLGTCCFDNSWRLWDLQAQEEILHQEGHSKPVYSI
AFQNDGELAVTGGLDAYGRVWDLRTGRCVMFMEGHLKSILSVDFSPDGFHVASGSEDNTA
KVWDLRHRKCNYTVPAHTNLISTVRFQRESRQLTTFLCVSL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgaggtggatcttcctgtcccgaagaggtcgaaagtgttgcattatggg
agtttggaagaccaggaaagacgtcgcatcaataatgatgacacttcaggttcaatggct
aatgatgctattgaggcaggcatcgaagctggcaatatcaacatcactgaaggaggacac
tttgacattgacgaggccgaagctgagagtcaggcagaggtgttagcgcagtttgaaaag
aggaaacgggctcgtcagattcaggtgtcgacagatgactcagaggtgaaggccaacctg
cgacaattgggtgaaccgatatgtctgttcggtgagggtccagcagagaggcgagagaga
ttgcgccagttgttggcccgacttggagaagatgctgtcaaaaagaagaaggaggaaaag
ctgcaggagcagaggaaaaaggaagaggagaatatcacatggtatcatgaaggtacggag
agcttgaaggatgcccgatactggctgtctgactactcaataccaagagagaaggagagg
gttagcagagaacgagaaagcaaactgactcccatggcacagaagaacgctcagatgcag
gagctgcagaagagaataaggtctgtaacgaatgactgcagtcagatcggtgatgaccga
ccgctgtcccactgtcagttcagcccagactcccagatgcttgcagtcgcctcatggtct
gggttgtgtaaactatggtccattccagactgccagttgatccgacagctgcgaggccac
aactgtcatgttggtgccattgtattccaccctgacgctacaattggtctagacaacagt
gtatgctgtatggcatcatgtggacaggatggttccgtcaagctctggaatctagtcagt
gatgaacctatagcagacattgaaggtcatgcaccgttccgagtgtcgaaactggcctac
cacccttcaggacgattcctcgggacatgctgttttgacaactcgtggcggctgtgggac
ttgcaagcccaggaggagatcctgcatcaggagggacacagtaaaccggtgtactccatc
gccttccagaacgatggagagcttgccgtcacaggagggctggatgcgtatggccgagtg
tgggatctgcggacaggccgctgtgtgatgttcatggagggacacctcaagtccatcctc
tccgtcgacttcagtcccgatgggttccacgtggcttctggaagtgaagacaacacggcc
aaagtgtgggacctgcggcaccgcaagtgtaactacaccgttcccgcccacaccaacctc
atctccaccgtcaggttccagcgtgagtcccgtcaactaacaacctttctttgtgtcagt
ctgtag
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