Haliotis rubra (blacklip abalone): 124265535
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Entry
124265535 CDS
T07967
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124265535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrj03041
]
124265535
Spliceosome [BR:
hrj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124265535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
PRP4
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_EML
NBCH_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_SCAP
WD_LRWD1
Beta-prop_SPT8
Beta-prop_IFT140_1st
Ge1_WD40
WD40_RFWD3
Beta-prop_DCAF12
CaM_binding
Motif
Other DBs
NCBI-GeneID:
124265535
NCBI-ProteinID:
XP_046556277
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MGVVSQLLAKHKARQIQVSTDDSEVKANLRQLGEPICLFGEGPAERRERLSQLLARLGED
AVKKKKEEKLQEQRKKEEENITWYHEGTESLKDARYWLSDYSIPRAKERVSRERESKLTP
MAQKNAQMQELQKRIRSVTNDCSQIGDDRPLSHCQFSPDSQMLAVASWSGLCKLWSIPDC
QLIRQLRGHNCHVGAIVFHPDATIGLDNSVCCMASCGQDGSVKLWNLVSDEPIADIEGHA
PFRVSKLAYHPSGRFLGTCCFDNSWRLWDLQAQEEILHQEGHSKPVYSIAFQNDGALAVT
GGLDAYGRVWDLRTGRCVMFMEGHLKSILSVDFSPDGFHVASGSEDNTAKVWDLRHRKCN
YTVPAHTNLISTVRFQPQHGNYLLTASYDNMAKIWASPNWAPLKTMAGHEGKVMGLDVSL
DLKYIATCSYDRTFKLWVSEMQGGL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgtcgcagttgctggctaagcacaaagctcgtcagattcaggtgtcgaca
gatgactcagaggtgaaggccaacctgcgacagttgggagaaccgatatgtctgttcggt
gagggtccagcagagaggcgagagagattgagccagttgttggcccgacttggagaagat
gctgtcaaaaagaagaaggaggaaaagttgcaggaacagaggaaaaaggaagaggagaat
atcacatggtatcatgaaggtacggagagcttgaaggatgcccgatactggctgtctgac
tactcaataccaagagcgaaggaaagggttagcagagaacgagaaagcaaactgactccc
atggcacagaagaacgctcagatgcaggagctgcagaagagaataagatctgtaacgaat
gactgcagtcagatcggtgatgaccgaccgctgtcccactgtcagttcagcccagactcc
cagatgcttgcagtcgcctcgtggtctgggttgtgtaaactatggtccattccagactgc
cagttgattcgacagctgcgaggccacaactgtcatgttggtgccattgtattccaccct
gacgctacaatcggtctagacaacagtgtatgctgtatggcatcatgtggacaggatggt
tccgtcaagctctggaatctagtcagtgatgaacctattgcagacattgaaggtcatgca
ccattccgagtgtcgaaactggcttaccacccttcaggacgattcctcgggacatgctgt
tttgacaactcgtggcggctgtgggacttgcaagcgcaggaggagatcctgcatcaggag
ggacacagtaaaccggtgtactccatcgccttccaaaacgatggagcgcttgccgtcaca
ggagggctggatgcgtatggccgagtgtgggatctgcggacaggccgctgtgtgatgttc
atggagggacacctcaagtccatcctctccgttgacttcagtcccgatgggttccacgtg
gcttctggaagtgaggacaacacggccaaagtgtgggacctgcggcaccgcaagtgtaac
tacaccgttcccgcccacaccaacctcatctccaccgtcaggttccagcctcaacatggg
aactacctccttacagcgtcctacgacaacatggccaagatatgggccagccctaactgg
gcccctctcaagacaatggctggccacgagggcaaggtgatggggctcgacgtctcactc
gacctcaagtacatcgccacttgttcctatgatcggacatttaagctgtgggtgtcggag
atgcagggtggtttgtga
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