Haliotis rubra (blacklip abalone): 124265825
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Entry
124265825 CDS
T07967
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrj04121
]
124265825
Enzymes [BR:
hrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124265825
Ubiquitin system [BR:
hrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124265825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-C3HC4_4
FYVE
ANCHR-like_BBOX
Pch2_N
Motif
Other DBs
NCBI-GeneID:
124265825
NCBI-ProteinID:
XP_046556623
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MASISTPGKIPVPHEDITCRLCQQPFSSPKLLTCLHSFCQLCIEERLTTEGGGHVFQCPL
CKHKTRLQTKSASSLTTNFYILGRQRVYACRTPQASNCVVCSMKGDFCETTHHCLDCGDK
LCETCSMRHNSSTLTATHRVVSLDDIRQGQYDKHFLEKEEQICDKHHETLSIFCHTCSEA
VCIQCAFAEHKKHQFDTVDEAADKRRESLKQALSMVGATSSSIQDSAKTLQAEMGQLNKE
EEIFVSELTSSVAAVVEKITEKSSEVLEKGRRSFQDERRRRQRMLELVNSESERREEVVR
VCQQVEEGGGLTLLLLSQTLQQGLKEYAEEPAVSSTGTLTTYKVNINLPVDAEVITFREV
PMAQGSPNVPCSCADPQVTPKSSIPKSLKEEPKIQTTHPTSTPQEWVMDTSANDDEGGEA
IGDKDASQSKDRAAKEFLEINLHGIDATEEGVLSYMSQFSTQIGTDKSQPNISSIAFKDK
GRLLILDDSNAKLKDFYDNGKIIGLVNQNGKCDLFKRFVCVDNDSTICAIYENYLVILTK
HLQVQSKIPLARNGEMTCDPIVANFGDHIIVGNLPNKEMRVMTTTGKMVRNWTSKVKGEM
KSLRYVADDVVIVCSWQRQGSVCLESEKDGLFLKVNGHKRNGMKWRPSDAIFGANGRIIA
CDMYRNEILIFSPEGRTLCVVDTMQNNLSEPRCVLFWPRWQSVCFLQRRRCCCLRNSVM
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaatttcgacacccggaaaaataccggtacctcatgaagacatcacttgtagg
ctgtgccaacagccgttctcctcccccaaacttttgacgtgtctccattcattctgtcag
ctttgtattgaagaacggcttactaccgagggcggtgggcatgtcttccagtgtcctctg
tgcaaacataaaactcggctacagacgaaatcagcgagctctctaacgacaaacttctat
atactggggcgtcagagggtgtacgcttgtcgcacaccacaggcctctaactgtgtggtt
tgttcaatgaaaggcgatttttgtgaaaccactcaccattgcctggattgtggcgacaaa
ctttgtgaaacttgctcaatgagacataactcttcaactcttacagcgacacatcgagtg
gtctcccttgatgacatcagacaaggtcagtacgataaacactttcttgagaaggaggaa
cagatttgtgacaaacaccacgaaacattgagcattttctgtcacacatgttctgaggca
gtatgtattcaatgtgcctttgctgagcacaagaaacatcagtttgacactgtagacgaa
gcagctgacaaaaggcgtgagtcattgaaacaggcactgtcaatggtaggagcgacgtct
tccagtattcaagactctgccaaaacactgcaagcggagatgggtcagttaaacaaagag
gaagaaatatttgtgagtgagctgacttcgtcagttgctgctgtggtggagaagatcact
gagaagagttctgaggtgttggagaagggcaggagaagttttcaggacgagaggcgtagg
aggcaaaggatgctggagctggtgaactctgagtctgaaagaagggaggaggttgtccga
gtatgtcagcaggtggaagagggtggtgggctgactcttctgttgctgtcccagactctt
caacaggggctgaaagaatatgcagaggaacctgccgtgtcatctacaggtactctgact
acatataaggttaatataaaccttccagttgacgcagaagttatcacttttcgtgaagtt
ccaatggcccaaggaagcccaaatgtaccatgttcttgtgcagatccccaggttacaccg
aaatcttccatacccaaatcactcaaggaagaaccgaagatacaaaccactcatcccacc
agcacaccacaggaatgggtaatggacacatcagccaacgatgatgaggggggtgaagcg
attggagataaggatgcttcacagtctaaagacagggcagcaaaagaatttcttgagata
aaccttcacgggatagacgcaacagaggaaggggttttatcatacatgagtcagttcagc
acacaaattggcactgataaatcacaacctaatattagctctattgcctttaaagataaa
ggtagacttttgattttagacgactcaaatgcaaagctgaaagatttctatgataatggt
aagataattggtttggtaaatcagaatggaaaatgtgaccttttcaaacggtttgtgtgt
gttgataatgacagtaccatctgcgccatctatgaaaactaccttgttatattaacaaaa
catctgcaagttcagtccaaaatacccttggcacgaaacggagagatgacttgtgatcct
attgtcgccaacttcggcgaccacatcattgttggcaatctgccaaataaggagatgcgg
gtcatgacgacaacaggcaagatggtcagaaactggaccagtaaggtcaaaggtgagatg
aaatcccttcggtacgtagcagatgatgtggtcatcgtgtgctcttggcaaaggcagggg
tccgtgtgtctcgagtcggagaaagacggccttttcctcaaggtcaacggacacaaacgg
aacggcatgaagtggcggccttcagacgccatctttggtgcaaatggacgtatcatagcg
tgtgacatgtataggaatgagatcctgatcttttcccctgaggggagaactttgtgtgtt
gttgatacaatgcagaacaatctgtctgaaccacgctgtgtgcttttttggccaaggtgg
caaagtgtatgtttcctacaaaggcggcgttgttgctgtttacgaaatagtgtgatgtag
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integrated database retrieval system
