Haliotis rubra (blacklip abalone): 124266483
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Entry
124266483 CDS
T07967
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124266483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124266483
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124266483
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
124266483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
124266483
NCBI-ProteinID:
XP_046557230
LinkDB
All DBs
Position
Unknown
AA seq
197 aa
AA seq
DB search
MAAPTVCVPGQRIFREGDSYVAGEGTYKRNGFIYSSLAGFLHTDETEEGKKRVEVRADVS
KNVVPAVDAVVTARVTNVNPRFCKCAILSVGKTPLRETFRGTVRRDDVRGTEKDKVEMYK
CFRPGDIIVARVLSLGDAHSYLLSTAENELGVVMATSEAGGSMVPVSWCKMQCPRTLAEE
FRKVAKVQKQFIQDSGT
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccacagtgtgtgtaccaggtcagagaatatttcgggaaggtgacagctat
gttgctggggagggcacatataaacgaaatggcttcatctactcaagtcttgcagggttt
ctacatacggatgaaactgaagaaggaaagaaacgggttgaagtaagggctgatgtgagc
aagaatgtagttcctgctgttgatgctgttgtcactgctcgggttacaaacgtcaatccc
aggttctgtaagtgtgctatcctcagtgtgggaaagacacctttaagagaaaccttccga
gggactgtcagacgagatgatgtccgaggtacggaaaaggacaaggtggagatgtacaag
tgttttcggccaggtgacatcatcgtagcccgtgttttatcactgggagatgcacattca
tatcttctgagtactgctgaaaatgagttgggagttgtcatggcaactagtgaagcaggg
ggcagcatggtgccggtcagctggtgcaagatgcagtgccctcggactctggctgaagaa
ttccggaaagttgccaaggtgcagaaacagttcattcaggacagcggaacttag
DBGET
integrated database retrieval system
