Haliotis rubra (blacklip abalone): 124266612
Help
Entry
124266612 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124266612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrj03021
]
124266612
Enzymes [BR:
hrj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124266612
Transcription machinery [BR:
hrj03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
124266612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Zn_ribbon_double
Motif
Other DBs
NCBI-GeneID:
124266612
NCBI-ProteinID:
XP_046557362
LinkDB
All DBs
Position
Unknown
AA seq
1392 aa
AA seq
DB search
MVKEQFREADVAKKISHVTFGMMTPQEMQQVAHIQVTCKNLYNQDGSRKPVAFGVLDHKM
GTSEKDNTCDTCGKGLADCTGHYGYVELELPVFHIGFFRTTITVLQMICKNCSHLLLHAA
DKKSFLEALKRPGMTYLQKKAMRKKIYDAARKVSICRSCGTYNGMVKKCGLLKIIHDRYK
QNRKGGEPVFTEFVGSFQSASESNKELEGLLPKTQEVLNPLSVLYLFERIRDEDIPLLLM
NQTVGRPENLILTRILVPPICIRPSVVSDLKSGTNEDDITMKLTEIIFLNDVIQKHRATG
AKMQMIMEDWDFLQLQVALLYNSETSGIPLHMQPKKSMRGFVQRLKGKQGRFRGNLSGKR
VDYSGRTVISPDPNMRIDQVAVPEHVAKILTYPEKVNRANIKLMKQLVLNGCDVHPGANF
IQQRDNNIKRFLKYGNRQKIASSLKFGDTVERHLMDGDVVLFNRQPSLHKLSIQAFYAKV
MPNRTFRFNECCCGPFNADFDGDEMNLHLPQTEEAKAEAITLMGSKSNIITPRNGEPLIA
AIQDFITGAYLVTQKDVFFDRSRACQLVSSMLAAKDMKIKIDLPPPAIWKPCKLWTGKQI
FSLLMRPNRSCPVKANLRTKGKNYTKDEDLCTNDSWVVIQNSELLCGAMDKATLGSGSKN
NIFYIILRDYGQEYAADAMSRLARLCPAYLSNRGFSIGIGDVTPGLGLIKAKNALLDDGY
SSCDSYIRDLEDGKLQTQPGCSEEETLEAMILKELSVIRDHAGKACLRELHKSNSPLTMA
ICGSKGSFINISQMIACVGQQAISGKRVPNGFEDRALPHFERHAKEPAARGFVSNSFYTG
LTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCLQYDLTVRSSTGEVVQFV
YGGDSLDPAAMEGNEKPMVFKRVMDHIRSVTMRDCHSDPSLTGKQLRDLSSQILEGEAWH
EVSKEFREEVRKYMENYAEKIDKTRSKLVTKQKSKKGNVVYQVERVTKLQVKKMLDTCLD
KYMRALIEPGTAVGAVCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKSI
STPIISAQLEVSDNAEFARVVKGRRXKGLLFQVSEYIEEVFLPDDCFILIKLDMDRIKLL
KLEVTADSIRDSLTKSKLGIKFPDVHIYNTDLLSVSAHETSKSSMYYVVLQNLKKHLPGV
MIKGIPTVTRAVIHIDEKSDSLTLLVEGDNLLEVMATQGVKGTATLSNNTFEVMKTLGVE
AARSTIMNEIVYTMVNHGMSIDIRHVMLLADLMTFKGEVLGITRFGLAKMKDSVLMLASF
EKTADHLFDAAYYGQTDSINGVSECIIMGIPMTIGTGLFKLLYRAEKKPELTKRPLIFDN
DDFHIPEASAAT
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaacagttcagagaggccgatgtggccaagaaaatctcccacgtcacgttt
gggatgatgactccccaggagatgcagcaagtagcacacatacaggtgacctgcaagaac
ctctacaaccaggatggaagcaggaaacctgtggccttcggggtcctggatcacaagatg
gggaccagtgagaaggacaacacgtgtgatacatgcggcaagggcctcgcagactgtact
ggtcactatggttacgtagaactggaactccctgttttccatattggatttttcaggaca
actataacagtattacaaatgatttgtaagaactgtagccacctactgctgcatgctgct
gataagaaatcattcctggaggctctgaagaggccagggatgacctacctccagaagaaa
gctatgaggaagaagatctacgatgctgccagaaaggtgtcaatatgtcggtcctgtggg
acatataatggaatggtgaagaaatgcggtctcttaaagattattcatgatcgttacaaa
caaaacaggaaaggaggagagcctgtttttaccgagtttgttggttcatttcaaagtgca
agtgaaagcaataaggagcttgaaggacttttgcctaaaacacaggaggtgcttaatcca
ctgtcagtcctttatctgtttgagaggatacgagatgaggatattcctctgttgttgatg
aaccagacagtgggaagaccagaaaacctcattctcactcgaatcctcgtcccacctatc
tgcatacggccttcagttgtctccgacctcaagtctggcacgaacgaagatgacattaca
atgaaactgacggaaatcattttcctgaatgatgtcattcagaaacaccgtgctactggc
gccaagatgcagatgatcatggaagactgggactttctgcagctccaggtggcgctgcta
tacaacagtgagacgtccggcatcccgctccacatgcagccaaagaagtcgatgcgaggg
tttgtacaaaggttgaagggcaaacagggtcgtttccgtggaaacctgtctggaaagcga
gttgattactctggaagaactgtgatctctcctgaccccaacatgaggatagatcaggta
gcagtaccagagcatgtggccaagatcctcacttacccagagaaagtgaacagagccaac
atcaaactcatgaaacagttagtgctcaatggctgtgacgtccatccaggtgccaacttc
atccagcagcgtgacaacaacatcaagaggtttttgaagtatggaaatcgtcagaaaata
gccagcagtttgaagtttggtgacacagtggaaaggcatcttatggatggtgacgtggtt
ctgttcaacaggcagccatccctgcataaactcagtatacaggcattttatgccaaggtg
atgccaaatcggacattccgtttcaacgaatgctgctgtggccccttcaatgccgacttt
gacggagatgagatgaacctccacctgccgcagacagaagaggcaaaggcagaggcaatc
acactcatggggtctaaatccaatattatcacaccccggaatggagaaccactgattgct
gctatacaggatttcatcacaggtgcctaccttgtgacccaaaaggatgtcttctttgac
cgaagtcgtgcctgtcaacttgtgtcctccatgttggctgccaaagacatgaaaatcaaa
attgatctacctcctcctgcaatctggaagccatgcaagctgtggacaggcaagcagatc
ttcagtctgctgatgcggccaaatagatcttgtcctgtgaaggccaacctgaggaccaag
ggcaagaactacactaaggatgaggacctgtgcacaaatgactcatgggtggtgatccag
aacagtgagctgctgtgtggagccatggacaaggccacactggggtccggctccaagaac
aatatcttctacatcattctgcgagactacggacaagagtatgcagctgatgccatgtcc
cgactcgctcgactctgtccggcatacctctctaaccgagggttttctatcggcattggt
gatgtgacacctggtctgggcctgatcaaggccaagaacgcattgctggatgatgggtac
agtagctgtgacagctacatccgagacctggaggatggcaagctccagacacagccaggc
tgctcagaggaggaaacgcttgaggccatgatcctgaaggagctgtctgtgatccgagac
catgctgggaaggcctgtttacgggagctgcacaagagcaatagccccctcaccatggcc
atctgtggctccaaagggtcctttatcaacatctcgcagatgattgcctgtgtcggccag
caagccatcagtggcaaacgagtgcccaacggatttgaggacagggctctgcctcacttc
gagagacatgccaaagagcctgcagctagagggtttgtgtccaacagtttctacactggc
ctcacaccgacagagtttttcttccacaccatggctggacgagagggtctggtggacact
gcggtcaagacggcagagactggctacatgcagaggcgactggtcaagtcgctcgaggac
ctgtgcttgcagtacgacctgacagtcaggtcgtctacaggggaggtggtgcagtttgtg
tacgggggagacagccttgacccagccgccatggagggcaatgaaaagcctatggtcttc
aagagagtcatggatcatatccggagtgttactatgagggactgtcacagtgatccgtcc
ctgacggggaagcagctgcgtgacctctccagccagatccttgaaggggaggcttggcac
gaggtcagcaaggagttcagggaggaggtcaggaaatatatggagaattatgctgagaag
atcgacaaaacccggagtaaacttgtaacaaaacagaagtcaaagaaaggaaatgttgtg
taccaggtggagagggtcaccaagctgcaggtgaagaagatgctggacacctgtctggac
aagtacatgcgggccctcatagagccagggacggcagtgggagctgtgtgtgcccagtct
atcggggagccggggacacagatgaccctcaagacctttcacttcgccggggtggcgtcc
atgaacatcacgcttggtgtgcccagaatcaaggagatcatcaacgcctccaagtccatc
agcactcccatcatcagcgcccagttggaggtcagcgacaacgcggaatttgccagggtt
gtcaagggcagacgatagaaaggtctcctatttcaggtgtcggagtacattgaagaagta
ttccttccagatgattgttttatactcatcaaactagacatggacagaatcaaactgctc
aagctggaggtgacagcagacagtatcagagattcattaactaaatccaaacttgggatc
aagtttcctgatgtccacatctacaacactgacctcctttcggtatctgcacacgagacg
tccaagtcgtccatgtactacgtggtgctgcagaacctcaagaagcacctgcctggcgtc
atgatcaagggcatcccgactgtgacgcgtgctgtgatacatatagacgagaagtctgac
tccctcacactgctggtggagggagataatttattggaggttatggccactcaaggggtg
aaaggcaccgccacattatctaataatacattcgaggtgatgaagacacttggggtggag
gctgctcgttcaaccatcatgaacgagattgtatacaccatggtcaaccatggcatgagc
atcgacatcagacatgtcatgttactggctgacctgatgacctttaagggagaagttctt
gggatcaccagatttgggctggccaaaatgaaggacagcgtgttgatgctggcgtctttt
gagaaaactgccgaccatctgttcgatgctgcatactacggacagacagactccatcaat
ggtgtgagtgagtgcatcatcatgggaatcccgatgacaataggcactggcctcttcaag
ctgctctacagagctgaaaagaagccagaactaaccaaacgtccactcatctttgacaac
gacgacttccacattcctgaagcgtctgcagcgacgtga
DBGET
integrated database retrieval system
