KEGG   Haliotis rubra (blacklip abalone): 124266719
Entry
124266719         CDS       T07967                                 
Name
(RefSeq) replication factor C subunit 5-like
  KO
K10756  replication factor C subunit 3/5
Organism
hrj  Haliotis rubra (blacklip abalone)
Pathway
hrj03030  DNA replication
hrj03410  Base excision repair
hrj03420  Nucleotide excision repair
hrj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hrj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124266719
   03410 Base excision repair
    124266719
   03420 Nucleotide excision repair
    124266719
   03430 Mismatch repair
    124266719
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hrj03032]
    124266719
   03036 Chromosome and associated proteins [BR:hrj03036]
    124266719
   03400 DNA repair and recombination proteins [BR:hrj03400]
    124266719
DNA replication proteins [BR:hrj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    124266719
  DNA Replication Termination Factors
   ELG1-RFC complex
    124266719
Chromosome and associated proteins [BR:hrj03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    124266719
DNA repair and recombination proteins [BR:hrj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     124266719
  Check point factors
   HRAD17(Rad24)-RFC complex
    124266719
SSDB
Motif
Pfam: Rep_fac_C DNA_pol3_delta2 AAA RCF1-5-like_lid AAA_assoc_2 DNAX_ATPase_lid DEAD Gp44_lid
Other DBs
NCBI-GeneID: 124266719
NCBI-ProteinID: XP_046557469
LinkDB
Position
Unknown
AA seq 421 aa
LKILFGIANRIITPFQPRPPGLYERQPAPSQACVAEAGGHLGEFHHVALSTRPRELDIDS
PNSDSRKSELRIGSADPVVPVFDSPVGGRLGLFAPNWEVLGDPFVTMTLIPRLSTACGQV
DQNSASGSASLGSPQNSPVAGVAGVLTSAQALTYRGQLQQPTSVISRPHLQTNNPQVLIR
LPGNSRPILVGGSAFRSGFKIVILDEADAMTRDAQNALRRVIEKFTENTRFCIICNYLSK
IIPALQSRCTRFRFGPLSTHQMVPRLEHVIAQEGINVTEDGMKAVVTLATGDMRKSLNIL
QSASMAYEEVNEDNVYTCVGHPLRRDIENIVNWVLNENFTAAYNNISHLKVAKGLALQDI
LTEVHQYVHLVDLPIHVRVYLLEKLADIEYRLASGTSEKIQLSSMIAAFQTARDLLVSEA
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
ctcaagattctgttcggcatcgcgaaccgcataattacccccttccaacccagacctccg
ggactgtatgaaaggcaaccggcgccttctcaagcctgcgtggcagaggcaggaggccat
ttaggtgagttccatcacgtcgccctatcgacccgaccacgggaactggacatagacagt
ccaaacagtgactcacggaagtcagagctccggattggttctgcggatccggtggttcca
gtgttcgattcccctgtaggagggaggttaggtctgtttgctcccaactgggaggttctg
ggagatccttttgtcacaatgactctcattccgcgactgtcgactgcctgtggacaggtg
gaccaaaattcagcgtctggttccgctagccttggatcaccccagaactcgccagtggca
ggagttgctggcgtcttaacgtcagctcaggctctgacttacagaggtcaactgcagcag
cccacttcagttatttctcgccctcatcttcaaaccaacaaccctcaggtgttgattcgg
ttaccagggaactcacgtccaattctcgttggtggctcagctttcaggtctggctttaag
atagtcattctggatgaagctgatgctatgactcgggatgctcagaatgctctcaggaga
gtgattgagaagttcacagagaacacccgattctgcatcatctgcaactatctgtccaag
atcatcccagccctgcagtctcgatgtacccgctttcgattcggtccgctgtccacacat
cagatggtgccgcgactggaacatgtcatagcacaggaggggattaatgtgacagaagat
gggatgaaggctgtggttaccctggcaactggagacatgaggaagtctctcaacatccta
cagagtgcgtccatggcctacgaggaagtaaatgaagacaacgtgtacacctgcgtgggg
catcctctcaggagggacatcgagaacatcgtcaactgggtcctcaacgaaaacttcaca
gcggcgtacaacaacatcagccacctgaaggtggccaaaggcctggctctccaggacatc
ctgaccgaggtccaccagtacgtccatctagttgacctgccaatccatgtgcgagtctat
ctgctggagaaactggctgacatagagtatcgcctggcatcaggaaccagtgagaagatc
cagctgagctccatgattgctgcattccagactgcacgagacctgctggtcagcgaggcc
aagtga

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