Haliotis rubra (blacklip abalone): 124267871
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Entry
124267871 CDS
T07967
Name
(RefSeq) general transcription factor IIH subunit 4-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03022
Basal transcription factors
hrj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124267871
09124 Replication and repair
03420 Nucleotide excision repair
124267871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrj03021
]
124267871
03400 DNA repair and recombination proteins [BR:
hrj03400
]
124267871
Transcription machinery [BR:
hrj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124267871
DNA repair and recombination proteins [BR:
hrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124267871
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
124267871
NCBI-ProteinID:
XP_046558815
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MAATRKLDCKDLHAYLKTLHTSILDRLYSNPATCLAVFRELPELGRHYVMRILFVEQPVS
QSVVGQWISNKHQEEHRYAVKSLSDLRVWHDQPLPWGMPGWLLNHTFRKNMKIALLGGGE
AWTGGGPLPQDKHAKDVSFLDKYALERWECVLHFMVGSSEGTDGVSKDIIDVLLHSGLMK
EESSEPLPSISPAGFQFLLLDTGSQVWYFMLQYLESVESRGMDLVECLSFLFQLSFSTLG
KDYCTEGMSESQLKFLQHLREFGLVYQRKRKSQRYYPTRLAINIASGLTTFNTDSHSSGY
LVVETNYRVYAYTDSPLQTALLALFCQMLYRFPNMAVANLSRDSVRAALMRGITAEQIIN
FLRSHAHPEMMKTSPVIPLTVCDQVRLWELERDRFKFSDGVMYNQFLSQNDFELLRDYAQ
DLNVLVWDNPSKRVMIVSRGGHDDVKRFWKRQKQS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacgagaaagttagactgtaaagacttacacgcttatttgaaaaccttacac
acgtccatcctcgacagactgtacagcaaccccgcaacttgtttggcggtcttcagagag
ttgccagagctgggacgccactatgtgatgagaattttgtttgtggagcagccagtttcc
cagtctgtggttggtcagtggatctcaaacaagcaccaggaagaacatcgttatgcagtg
aagtctctgtcggatctgagggtgtggcatgaccagcccctcccttgggggatgccaggc
tggttactcaatcacacattccggaaaaacatgaagattgccttgctgggaggtggtgaa
gcctggactggcggagggccactgccgcaggacaagcatgccaaggatgtctcatttctg
gataaatacgccttggagagatgggagtgtgtgctgcactttatggtggggtcgtcggag
gggacagacggggtcagcaaagatatcatcgatgtgctgctccacagtggactcatgaaa
gaggagtcgtccgagccactgccatccatttccccggctggcttccagttcttgctgctt
gatacgggctcccaggtgtggtacttcatgctgcagtacctcgagtctgtggagtctcga
gggatggatcttgtagagtgcttatcatttttgttccagttaagtttctccactctagga
aaggactactgtactgagggcatgagtgaatctcagctgaaattcctgcagcaccttcga
gagtttggactggtttaccaacgtaagagaaaatctcaaagatattaccccactcgccta
gccatcaatatagcatcgggactaacgactttcaacactgacagccattcatctgggtac
ctggtggtcgagacaaactacagagtgtatgcttatacagattctcctctacagacagca
ctgttggcgttattctgtcaaatgttatacagattccccaatatggccgtagccaacttg
tcccgagacagtgtcagagcagctctgatgaggggaataacagccgagcagataatcaac
tttctacgcagccatgctcatcctgagatgatgaaaacaagccccgtgatccccctaact
gtgtgcgaccaggtgcgactctgggagctggagagagaccgcttcaagttttcagatggc
gtcatgtacaaccaattcctgtctcaaaatgactttgagcttctcagggactatgcacaa
gatctgaacgtcctagtttgggataacccaagtaaaagagttatgatcgtctcacgggga
gggcacgacgatgtaaaacgattctggaagaggcagaagcaatcttga
DBGET
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