Haliotis rubra (blacklip abalone): 124267925
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Entry
124267925 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124267925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hrj03009
]
124267925
Ribosome biogenesis [BR:
hrj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124267925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_WDHD1_1st
WD40
Beta-prop_WDR3_2nd
WD40_Prp19
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_WDR19_2nd
Beta-prop_Vps41
PEP5_VPS11_N
WD40_RFWD3
Beta-prop_VPS8
PROPPIN
Beta-prop_NWD2_C
VPS11_N
Beta-prop_EMC1_N
Motif
Other DBs
NCBI-GeneID:
124267925
NCBI-ProteinID:
XP_046558872
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MGEFRVHHIRFFEYKPKAIHCLAYTKEWKRLAVSRSDGSLEIWSEQDKWFQERVIPGSGD
RSIEAVIWQGKRLFTAGLDGEVTEYDLIKLQAMRSAFSHAGPIWCLTQNSSGTRLAAGTE
DGCVVLFDIEMDNLQYLKSFDKQEGRILSIAWHEGENIIVTGGVDNIRLWSASSGHAIQR
LTIGREEVSKETIVWCVTVTSDLTVISGDSRGKTCFWNGKMGTLIRSFQSHKADVLSLCL
NETEESLYTVGVDPTIVQFEXDHLSWENNTGKWTRSIVRSNHTHDIRAIVLSGDTIITGG
VDTNLVLHDINPAKGKGRKVPGLPQRPLVSVAKDAGLLLLQYPTSLEVWRLGATKRKSNI
HGEILPLDTKPLKLVQLKAKIGECVVCSAIAADGSLIGYSDERSIRLYNFTVNESDALQP
VVTLTRIKVIDEDIMPAHLMRFNVHKQLISASCSAAVQVIDVKDTEVKVNHTFQPLK
NT seq
1432 nt
NT seq
+upstream
nt +downstream
nt
atgggggagtttagggtgcaccatattcgcttcttcgagtacaaacccaaggcaattcac
tgtctcgcttatacaaaagaatggaagagactagctgtttcacgatctgacggctcactg
gaaatatggagtgaacaagacaagtggtttcaagaaagggttattccaggaagtggagat
cggtcaattgaagctgtgatatggcaagggaagcgactcttcacagcaggacttgatggc
gaggtgacagaatatgatttgatcaaactgcaggccatgcgctctgccttttcccatgca
ggacctatttggtgtcttacacagaattccagtgggacaagactagctgcagggacggaa
gatggctgtgtggttttatttgatattgaaatggacaatctacagtacctgaagtcattt
gacaaacaagaaggtcgtattttgtccatcgcttggcatgagggtgagaacattatagtg
accggaggagtggacaatatccgtttgtggagtgccagctctggacatgctatccagcga
ctgaccatcggccgagaagaggtctctaaagagaccatcgtgtggtgtgtcaccgtcaca
agtgacctgacagtcatcagtggagactcccgtgggaagacatgcttctggaacggcaag
atgggaactctcattcggagtttccagagccacaaggccgacgtgttgtctctctgtctc
aatgagacagaggagagtttgtacacagtaggagtggatcccaccattgtccagtttgag
naagatcatctatcctgggagaacaacactggcaagtggacgaggtcaatcgtccggtcc
aaccacacccatgacatccgagccatcgttctgtctggggacaccatcatcacaggaggt
gttgacaccaacctggtcctgcatgatatcaacccagctaaaggcaaggggaggaaggtg
cctggtctgccgcagcgccccctggtgagtgttgccaaggatgcaggcctgctgttgttg
cagtatccaacatccctggaggtatggcggctcggcgccaccaagagaaagtcaaatatc
catggggaaattctgccgctggacaccaagccactgaaactggtccagctgaaggccaag
ataggagaatgtgtcgtctgcagtgccatcgcagctgatgggtctctgattggctactca
gatgagaggagtatccggctgtacaactttactgtgaatgaatcagatgcccttcaacca
gttgtgaccttgacccgaattaaggtcattgatgaagacatcatgccagctcatctcatg
agatttaacgtccacaagcaactcatctcagcctcatgttcagcagctgttcaagttata
gatgtcaaggacactgaggtcaaggtcaatcacacgttccaaccactgaaag
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