KEGG   Haliotis rubra (blacklip abalone): 124268215
Entry
124268215         CDS       T07967                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
hrj  Haliotis rubra (blacklip abalone)
Pathway
hrj03020  RNA polymerase
hrj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hrj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124268215
  09124 Replication and repair
   03420 Nucleotide excision repair
    124268215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hrj03021]
    124268215
   03400 DNA repair and recombination proteins [BR:hrj03400]
    124268215
Transcription machinery [BR:hrj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     124268215
DNA repair and recombination proteins [BR:hrj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      124268215
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 RRT14 DUF7667 Dus
Other DBs
NCBI-GeneID: 124268215
NCBI-ProteinID: XP_046559207
LinkDB
Position
Unknown
AA seq 140 aa
MASGGLPSDQQEEDASELQFPKEFENAETLLISEVQMLLEHRKQQNESAEEEQELSEVFM
KTLNYCSRFSKFKNRETIAAVRSSLMQKKLHKFELAALANLCPETSEEAKSLIPSLEGRF
EEDELQQILDDIKTKRSFQY
NT seq 423 nt   +upstreamnt  +downstreamnt
atggcgagcggaggattgccgtctgaccagcaagaagaagatgcctcggaattacagttc
ccgaaagaatttgaaaatgctgagactctgctgatatcggaagtacagatgttgttagaa
catcgaaagcagcagaatgagagtgctgaggaggagcaagagctttctgaggtgttcatg
aagacgctcaactactgctcccgcttcagcaagttcaagaacagagaaaccattgccgct
gtcagaagttcacttatgcagaagaagttacacaagtttgaacttgctgccctggctaat
ctatgccctgaaacatcagaggaagctaaatctctcattcccagtttggaaggaaggttt
gaggaggatgagctgcagcagatattggatgacatcaaaacaaagcgaagctttcagtac
tga

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