Haliotis rubra (blacklip abalone): 124268515
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Entry
124268515 CDS
T07967
Name
(RefSeq) collagen alpha-1(II) chain-like
Organism
hrj
Haliotis rubra (blacklip abalone)
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NCBI-GeneID:
124268515
NCBI-ProteinID:
XP_046559456
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Position
Unknown
AA seq
1811 aa
AA seq
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MIRIWMLTWPVTPQDPKKKKSIEKTPLVKAESVESYDSVEVPITDDRIHPISSGRRSEDQ
TSLLKPTDKNTHAPNTYKENGYLVPNGRESTLPLKSSDSREDKIVPDTTSTLNSNPPNKA
GGDGLDNEEDRQRHLHSSPDKGLEKSPGSDSRHDGLPKQTLFQMANHRRNSEQNGGTDDR
QRTLPSSPDSKLGNHGNGYQAGDETSLLIGPGNSRTPGVKDDRGNNSGSDGPHRYGAIPG
ERNGNSHSDIDSGDSSVAYPNSDSSFANGTEDRDRHMPPNGHTGDERDTDGSLSGDKASL
LLSPSGRRGSNAEKESNTNLKSSERRDKELPSNQSRGRRLEASPGRTPKSRSPSLNAKRP
NDKDKQPVKEIPLRKEKPPVPTVKKLGFGSTYKQPKPGSKDASKDASKDASKDPKKRKGA
ASKTPQNASEVIEPEMVRDTKTQKPVSAAPPEGKGREPGGADNSKPGHDTSPGATEAVTP
EDGDFDAEAPLTFVVPDGSSQRKASYPQDGYLVLYNDIEDSDDREFVEEESSTDLHTLPR
RPKPTSGDEGQGQVVAGEGGPLRKVPGHLDLQFDAGEASDDPYDDHGPGPGQRGAPHTKL
RGVPRGTATDADPPEINESTPVAVKMAAPRGAAGSSSMGDLRAQAPHGGVGGAPPGKDAA
RSQRELQGSGPATLTTAGGDADSMGLYDQHGQPLRRPVVDEDSVAGEGGRRTKGSPGSLN
VRRAAGDEDVIVPEDAHVSHAQLQARGADTDGGRDGVAGLRNGKDGAPPGKDAARSQREL
QGSGPATLTTAGGDADSMGLYDQHGQPLRRPVVDEDSLAGEGGRRTKGSPGSLNVRRAAG
DEDAIVPEDAHVSHAQLQARGADTREGDSPRSLDVRRAPGDEDVIVPEGVSVSHSQLRPS
GGSSGDNGRGRNIAVLSGNGKLPDGQDTPSSQSEMEDPGFSTHVMSTARPSDRDGMTGGE
HGAALRRPGDRGSSAPDTDNSGTAPRGGVGGTPPGKDAARSQRELHGSGPATLTTAGGDA
DSMGLYDEHGQPLRRPAVDEDSVAGEGGRRTKGSPGSLNVRRAAGDDDVIVPEDAHVSHA
QLQARGADTDGGRDGYGDSPRSLDVRRAPGDEDVIVPEGVSVSHSQLRPSGGSSGDNGRG
RNIAVLSGNGKLPDGQDTPSTQSEMEDPGFSTHVMSTARPSDRDGMTGGEHGAALRRPGD
QGSAPDTDNAGTAPRGGVGGAPPGKDAARSQRELQRSGPATLTTAGGDADNMGLYDEHGQ
PLRRPVVDEDSVAGEGGRRTKGSPGSLNVRRAAGAGDEDVIVPEDAHVSHAQSQARGADT
DGGRDGVAGLRNGQDGAPPGKDAARSQRELHGSGPATLTTAGGDADSMGLYDEHGQPLRR
PVVDEDSLAGEGGRRTKGSPGSLNVRRAAGDGDAIVPEDAHVSHAHLQATGAGTREGDSP
RSLDVRRAPGDEDVIVPEGVSVSHSQLRPSGGSSGDNDRGRNIAVLSGNGKLPDGQDSPS
SQREMEDSGFSTHVMSTARPSDRDGMTGGEHGAALRRPGDRGSSTPDTDNAGTGLRDAPD
RGDVIADNHQTLESQKPGINVVLIQTGPMTPEERRHAEALKMNAFIDRVHIELPPTKPRI
IIFVRPGCWSLPHNETSASGTHGTPGTPGRGPAQTQQKKQNVSFGDLPDHTTTHKSKSVD
DGEVARKRKTFARVSRKGSRRLSRLRSFKRSSSLEDVEHLEPVMPDLAPVEPTEKRQTMM
KKTRSLDALDDDQPIWLDRHQSIDLSEIDARREYTRELEIIQGDSVKQLVKGFEDYSRRV
SRDWSATSLPL
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgatccggatctggatgctgacgtggcctgtgacgccacaagaccctaagaagaagaaa
tctatcgagaagactcccctggtaaaggccgagagcgtggagagttacgacagcgtggaa
gtacctattaccgacgaccggatacatccaatctcttctggcagaagatccgaagatcaa
acgtctctgctgaaaccgacagacaagaacactcacgctcccaacacgtacaaagagaac
ggataccttgttccaaatggacgcgaaagtacgcttcccttaaaatcaagtgactcaagg
gaagacaaaatcgttcctgacacaacgtcaacgctgaactcaaatcctcccaacaaagct
ggcggggatggtctagacaacgaggaggaccgtcagcgccatttacattcatcaccagat
aaaggtctggagaaatctcctggttctgactccaggcacgatgggctcccgaaacaaact
ttgtttcagatggcaaatcatcgaagaaattcagagcaaaatggtggtacagatgatagg
cagcgtacccttccatcatcacctgatagtaaactcggaaaccatggcaacggatatcaa
gctggagatgaaacaagcctactgattggtccgggtaattccagaactccaggggtaaag
gatgacaggggaaataactcgggaagtgacggtccccacagatatggtgctatccctgga
gaaagaaatgggaattctcactcagacatagacagtggagactcatccgtagcgtatcct
aattctgatagcagtttcgcaaatgggaccgaggatcgtgaccgacacatgcctccaaat
ggacacacgggtgacgaaagggacaccgatggttccttgtccggagacaaggctagcctt
ctactttctccttcaggccgaagaggttcgaatgcggaaaaggagagcaatacaaatttg
aaaagttcggaaagacgcgacaaggaattaccttcaaaccaaagcagagggagaagactg
gaagccagcccagggaggacccccaagtcccgatcaccgtcactcaatgctaaacgtcct
aatgacaaggataaacagcctgtgaaagaaattccacttagaaaggaaaaaccaccagta
cccactgtgaagaaattaggatttgggagtacatataaacagcctaaacctggatccaag
gatgcttcaaaagatgcttcaaaagatgcttcaaaagacccaaagaaacggaaaggtgct
gcctcgaaaacgccccaaaatgcatcggaagttattgaacctgagatggttcgggacacc
aagacgcagaagcctgtctcagcagcgccacctgaagggaagggaagagaaccaggaggg
gcagataactctaaaccaggacatgatacttcaccaggtgccacagaagctgtaacacca
gaagatggagattttgacgccgaagcgcctctaacgtttgttgttcccgacgggagttcc
cagagaaaggcctcgtatccacaggatgggtatttggtattatacaatgacattgaggac
agtgatgacagagaatttgttgaggaggaaagcagcaccgacctccacaccttgccccgg
cgtccaaagccgacctcaggggatgaaggccaaggtcaagtcgtcgctggtgaaggcgga
ccactgagaaaagtaccaggacatctggacctgcagttcgatgctggcgaagcatctgat
gatccatacgatgaccatggacctggaccgggtcagagaggagctccacacacaaagctc
cgcggtgtaccgagggggacagctacagacgccgaccccccagagataaacgagtctaca
ccggtggcagtcaagatggcggcgccgagaggtgctgcaggttcttccagcatgggcgac
ctcagagcgcaagcaccacatggcggggtgggcggggcaccaccagggaaggacgctgcc
agatcacagagggaactgcaaggatcggggccagcaacactcacgacggccggtggagat
gcagacagcatgggactgtatgatcaacacggacaaccactacgtcgtcctgttgttgac
gaggactccgtggcaggggaaggtgggagacgaacaaaagggtctccaggttccctgaat
gtacgtagagccgctggggacgaggatgtcattgttcccgaagacgcccacgtgtcccac
gcacagctacaagctagaggtgccgacactgatggaggacgtgacggtgttgcaggactg
cggaatggaaaagacggagccccaccagggaaggacgctgccagatcacagagggaactg
caaggatcggggccagcaacactcacgacggccggtggagatgcagacagcatgggactg
tatgatcaacacggacaaccactacgtcgtcctgttgttgacgaggactccctggcaggg
gaaggtgggagacgaacaaaagggtctccaggttccctgaatgtacgtagagccgctggg
gacgaggatgcgattgttcccgaagacgcccacgtgtcccacgcacagttgcaagctaga
ggtgccgacacacgtgaaggcgactcgccaaggtctctggatgtgcggagagctccagga
gatgaagacgtcatagttcctgaaggtgtcagtgtttcccactcccagttgagaccatcc
gggggcagcagcggagacaatggcaggggtcggaatattgccgtactctcaggaaacggc
aagctgcccgatggtcaagacacaccgtcctcccaaagtgagatggaggatcctggattc
agcacacacgtcatgtccactgctcgaccgtctgaccgagacgggatgacaggtggggaa
cacggagccgccctgaggagaccaggagaccggggatcgtcagcacctgacacagacaac
tctggtacagcacctcgtggcggggtgggcgggaccccaccagggaaggacgctgccaga
tcacagagggaactgcatggatcggggccagcaacactcacgacggccggtggagatgca
gacagcatgggactgtatgacgaacacggccaaccactacgtcgtcctgctgttgacgag
gactccgtggcaggggaaggtgggagacgaacaaaagggtctccaggttccctaaatgta
cgcagagccgctggggatgacgatgtcattgttcctgaagacgcccacgtgtcccacgca
cagttgcaagctagaggtgccgacactgatggaggacgtgacggttatggcgactcgcca
aggtctctggatgtgaggagagctccaggagatgaagacgtgatagttcctgaaggtgtc
agtgtttcccactcccagctgagaccatccgggggcagcagcggagacaatggcaggggt
cggaatattgccgtactctcaggaaacggcaagctgcccgatggtcaagacacaccgtcc
acccaaagtgagatggaggatcctggattcagcacacacgtcatgtccactgctcgaccg
tctgaccgagacgggatgacaggtggggaacacggagccgccctgaggagaccaggagac
caggggtcagcacctgacacagacaacgctggtacagcgccacgtggcggggtgggcggg
gctccgccagggaaggatgctgccagatcacagagggaactgcaaagatcggggccagca
acactcacgacggccggtggagatgcagacaacatggggctgtatgatgaacacggccaa
ccactacgtcgtcctgttgttgacgaggactccgtggcaggggaaggtgggagacgaaca
aaagggtctccaggttccctgaatgtacgtagagctgcaggggctggggacgaggatgtc
attgttcccgaagacgcccacgtgtcccacgcacagtcgcaagctagaggtgccgacact
gatggaggacgtgacggtgttgcaggactgcggaatggacaagacggagccccaccaggg
aaggacgctgccagatcacagagggaactgcatgggtcggggccagcaacactcacgacg
gccggtggagatgcagacagcatgggactgtatgatgaacacggacaaccactacgtcgt
cctgttgttgacgaggactccctggcaggggaaggtgggagacgaacgaaaggttctcca
ggttctctgaatgtacgtagagctgctggggatggggatgcgattgttcctgaagacgcc
cacgtgtctcacgcacacctgcaggcaacaggtgccggtacacgtgaaggcgactcgcca
aggtctctggatgtgaggagagctccaggagatgaagacgtgatagttcctgaaggtgtc
agtgtttcccactcccagctgagaccatccgggggcagcagcggagacaatgacaggggt
cggaatattgccgtactctcaggtaacggcaagctgcccgatggtcaagactcaccgtcc
tcccaacgtgagatggaggattcaggattcagcacacacgtcatgtccactgctcgaccg
tctgaccgagacgggatgacaggtggggaacacggagccgccctgaggagaccaggagac
cggggatcgtcaacacctgacacagacaacgctggtacaggtctccgggatgcccctgac
agaggagacgtcatcgcagacaaccaccagactctggagtcccagaagccgggcatcaac
gtggtgctcatacaaacaggtccaatgactcccgaggaacggcgacatgcagaagccctg
aagatgaatgccttcattgacagagtacacattgaacttcccccaaccaaaccgagaatc
atcatatttgtaagacccggatgctggagccttccccacaacgaaacatcagcatctgga
acacatggaacacctggaacacctggacgaggaccagcacagacacagcagaagaagcag
aatgtgtcctttggtgacttgccagaccacaccacgacacataagtcgaagtctgtcgat
gacggagaagtggccagaaagagaaagacatttgcacgtgtctcgcggaaggggtccaga
cgtctcagtcgcctccgatcgttcaagaggtcgtcgtcgttagaggacgtggaacacctg
gagcccgtcatgcctgatctagccccggtagaacccacagagaaacgacagacaatgatg
aaaaagacacggagtctggatgctctagacgacgaccagccgatctggctcgaccgccat
caaagcattgacctgagtgaaatcgacgccagacgagagtacacgagagaactcgagatc
atacagggcgactccgtgaaacagttagtgaagggctttgaggactacagtaggagggtg
agcagggattggtcggccacctcccttcccttgtaa
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