Haliotis rubra (blacklip abalone): 124269086
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Entry
124269086 CDS
T07967
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
124269086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrj03400
]
124269086
DNA repair and recombination proteins [BR:
hrj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
124269086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
PAXX
XLF
DUF3490
HAP1_N
KASH_CCD
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
124269086
NCBI-ProteinID:
XP_046560056
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MFLHTCAEILPTPNDKTMSQTTFVKLDTATRNYCFLQTTLRDGGKEGFQLMVTDGENIWS
GDLTEDNIDSLSTKAKMDYNTYVSQTAKAFTQQNLGGMQFEFQMKTRGDDSVDFIWKKHV
PADEIKFQLGSVTLYMKDDPARCIRQMFQQNITTTLSLQERIHSLDTDNARLSQERAMAL
KRLDKCITAKEEVERDLYEKFVTVLNSKKDKIRALKQQIEGGVPSSSSVRDNARPGTSGV
GDAGVSDESENEDVTNSISSTSRIPGESVAEEENTDEESQPAPSKRRRRAPVGRTTKKEA
DSSLVLEDEPDRAVTTVARRPARQRGANKKQTPSKPVLPKVTSKRSDSGGSSGPDRRSSM
RKSSSHSSNRSSDNQDPEDLFADLE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtttttacatacctgtgctgaaatacttcctactcccaacgataagacaatgtcgcag
acaacatttgtgaagctggacactgcgaccaggaattactgtttcctgcagacaacacta
agagacggtgggaaggaagggttccaactgatggtcactgatggggaaaacatctggagt
ggagacttgacagaggacaacatagacagcctcagcaccaaagctaagatggactacaac
acctatgtctctcagacagccaaggcatttacacaacaaaacctaggcgggatgcagttt
gagtttcagatgaaaacaaggggagatgactctgtcgactttatttggaagaagcatgtt
ccagctgacgaaatcaagttccagctaggcagcgtcaccctgtacatgaaggacgatcca
gctcggtgtattcgccagatgttccaacagaacatcacaaccaccttaagtcttcaggaa
cgcatccattctctagacacagacaatgcacgtctatctcaggagagggctatggccctc
aagaggctggacaaatgtatcaccgctaaggaggaggtggagagagatctgtatgagaag
tttgtaacagttctcaacagcaaaaaggataaaattcgagctttgaaacaacaaatagaa
ggtggcgtcccatcatcctccagtgtcagagataatgccaggcctggtacatctggtgtg
ggagatgctggagtgtcagatgagtcagaaaacgaggacgtcaccaacagcatcagctcc
acctcccggatcccaggagaaagtgttgctgaggaggaaaatacagatgaggaatctcag
cctgcgccatccaaacggagacgtcgggctccagtgggtcggaccacaaagaaggaagca
gattcctcacttgtgttagaagatgaacctgacagagcagttactacagtggcacggaga
cccgccagacagagaggagccaacaagaaacagacaccatccaagccagtgctccccaaa
gtcacctccaagcgatcagatagcggcggctccagcgggccagaccggagaagtagcatg
aggaagagcagttcccactcctcaaacagatcctcagacaaccaagatccagaagatctg
tttgcagacctggaatag
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