KEGG   Haliotis rubra (blacklip abalone): 124269438
Entry
124269438         CDS       T07967                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
hrj  Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:hrj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hrj03036]
    124269438
   03400 DNA repair and recombination proteins [BR:hrj03400]
    124269438
Chromosome and associated proteins [BR:hrj03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    124269438
DNA repair and recombination proteins [BR:hrj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     124269438
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT ARM_ECM29_C Cnd1 HEAT_2 TOR1L1_N IFRD HEAT_EZ HEAT_EF3_GNC1 UTP20_C
Other DBs
NCBI-GeneID: 124269438
NCBI-ProteinID: XP_046560400
LinkDB
Position
Unknown
AA seq 1026 aa
MAAPSWSISVQNFVRGIDDSTASDISQLLLKNEVKLLEIVEGLGKYLTDPDTGVRCRGTG
LLADILHNLTPDLLQDKEVELLSVYLCDKLSDHHSIQPPALNGLLALSNCNALPDGVAEK
ICSQIFKEVQNQTLAQEDRHHVYILLSNLLYKKLTELQKMEGNFVCGYIQAMDAERDPRN
LVIAFQLAQTITRNFPLGVFVEEMFEVTSCYFPIDFNPSAKDPGGITRADLITALRGCLT
ASPKFGQYCLPLLIEKISSDIQSAKIDSLDTLAVCCDVYGTECLNEFTGTLLSCIRKEVF
SGDSEELITAALSALTAIVKTLSQGVTQRVSSTYLSEFLQDIFKECKRYLLEPDLRLISP
TCQLLQSVARASDPACWTVLNTVIPTLLEQYATHNQSNQRKVILDNLKGFLEASGTFTYT
DEAPSPVMEYKAPVVEVLAAAVEDSSPSLRLSAVQMQRMLLSLSGVLVGDEVGQLGQQVV
KHLLSDSDTSVRDQCVTALQAITCLNVEVMKNIILPQIVSHLHNEPMETNAPCSFEPTKE
YLLTTLTSLATHIGVVEIVAREILGFLTSQTDNLSLVSAKCLSTLAQEHRSHQEIVAYVY
ETLLQQVLLVLLKGSSNHGADGQGADGSVGDSRGECGGVSDEVVTELAKVFRYTAVYLDR
RKAEELMQTVCELLVRGNMAVVPGADVKLDSFKPLQHTSPSSQTRLVAVLTAVLCSLPRE
MQIPDVMLLLQSLLQLSRKSSHSFTRNSATKCCAGLVNKLPADDSLESFIKETKEVLTGD
LELSPPNPSREKALIIWIWLSKALVLQGHAEANIFIQKLISLLDDPDLGLSAANGFLTIV
SEHEDVMTSEMSAIVQLFYRQKLFIQNVSVLTDKFQSAGKDAKPCYLMAISHLLRFLPKQ
VLLAEVKTLMPIMMQSLSCVETDLLTSTLTKVTELTSDAPEIISKYIDTLVPQLLKLTTT
SASMRVRIAALQCLNCLTVLPTHVTLTLKSKVTKSLQSTLDDKKRLVRRQAVVTRGNWFL
IGEPGK
NT seq 3081 nt   +upstreamnt  +downstreamnt
atggcggcgcccagttggagcatttctgtccaaaattttgttcgaggaatcgatgactct
acggcgtcagacatcagccaattactgttgaaaaatgaagttaaactactggagattgtg
gaaggattagggaagtacctcactgacccagacactggtgtacgttgtcgaggaacgggg
ctgttggctgacatcttacacaatctcaccccagacctcctacaagacaaagaagttgag
ttgctgtccgtgtatctgtgtgacaagctgtccgatcatcattccatccaaccacctgct
ctcaacggcctccttgctctgagcaactgtaatgcactcccagatggggtggcagagaaa
atatgtagccagattttcaaagaagtccagaaccaaaccctggctcaggaagatcgccat
catgtgtacatcctgttgtccaacctgctgtacaagaagctgacagagctacagaagatg
gagggaaactttgtgtgtggttacatccaagcgatggatgctgagagagacccacggaat
ctcgtcatagcattccagctggctcagaccatcaccaggaacttccctctcggtgtgttt
gtggaagagatgtttgaggtgacctcctgttacttcccaatagactttaacccgtctgcg
aaggacccaggcggtataacccgagctgacctgatcacggcactccggggctgtttgaca
gcctcacccaagttcggtcaatactgtctgccactcctcattgagaaaatctcctccgac
attcagagtgccaaaattgattctttagacacccttgccgtgtgctgtgatgtgtacggg
acggagtgtctcaacgagttcacaggcactcttttgtcatgtatcagaaaggaggtgttt
tctggtgactctgaagaactgatcacggcagcactgtctgcccttacagccatagtgaaa
acattgtctcaaggagtcacacagagggtgtccagcacgtacctgtctgagtttctgcaa
gatatattcaaagagtgtaagcggtacttgctggagcctgatctccgcctcatctcgccc
acgtgtcagctgcttcagtctgtggcgcgggcatcagaccccgcctgctggaccgtgctg
aacactgtcatcccaacactgctggagcagtatgccacacacaaccagagcaatcaaaga
aaggtaatcctagataatctgaagggtttcctggaagccagtggaacattcacatacaca
gatgaagcacccagcccagtaatggagtacaaggcacctgtagttgaagtgttggctgca
gctgttgaggattcgtccccatcgctgaggttgtcagcagtgcagatgcagaggatgctg
ctgtccctgtcgggagtgctggttggtgacgaggtggggcagttgggacaacaggtggtc
aaacacctcttgtctgactcggacaccagtgtcagagatcaatgtgtcactgctcttcag
gccatcacttgtctcaatgtggaagtcatgaaaaatatcatcttgccccaaatagtctca
catttgcacaatgaacccatggagactaatgcaccgtgtagttttgaaccaacaaaggag
taccttctgacaacactgacgtcgctagccacacacatcggtgtcgtcgagatcgttgcc
agggagatcctaggcttcctcactagtcagacagacaacctgtctctagtgtctgccaag
tgtctgagtacactggcacaagaacatcgatcccaccaggagattgtggcctatgtgtat
gagactctgctgcagcaggtgctcttggtgctgctgaaaggttcaagcaatcacggagca
gacggtcagggagcagacggttcagttggagatagtcggggagagtgtggaggagtcagc
gatgaggttgtgacagagcttgccaaagtctttagatacacagctgtctaccttgacaga
aggaaagcagaggagctgatgcagactgtgtgtgaactgttggtccggggcaacatggcc
gtggtaccaggagcagacgtcaagttagacagcttcaaacctctgcagcacacctctccc
tcaagtcagactcggctggtggctgtactcacggcagtgttgtgctcgttacccagggag
atgcagatcccggatgtgatgctgctgcttcagtccctactgcagctgagtcgaaaatct
tcacacagcttcacgcggaactccgcaaccaaatgttgtgctggcctggtcaataaactt
ccagcagatgacagccttgagtctttcataaaggagaccaaagaggtactaaccggtgac
cttgaactctcacctcccaatccaagtcgtgaaaaagccctgattatttggatttggctt
tctaaggctcttgtactgcaaggacatgctgaggccaacatcttcatccagaagctgata
tctctcctggacgatcctgaccttggtttgtccgctgctaacggattcctgacgattgtg
tctgagcatgaagatgtgatgaccagcgagatgtcggccattgtccagctattctacaga
cagaagctgtttattcagaatgtatctgtgcttactgacaagttccagtcggctggtaaa
gatgcgaagccctgttacctgatggccatttcccacctgctgagattcctgccgaaacag
gtgctgcttgccgaggtcaagactttgatgccaataatgatgcagtccttgtcatgtgtg
gagactgacctcctgacctcaaccttgaccaaggtcactgagctgacaagtgatgcccct
gaaatcatcagtaaatatatcgacaccctggtgcctcagcttctcaaactgacaacaact
tcagcttcaatgagagtacgaatagcagctctgcaatgcctcaactgcctaacagtgcta
cctactcatgtgaccttgaccctcaagtcaaaggtcacaaagtcactgcagagtacattg
gatgacaagaagagacttgttagacgacaagctgtcgtcacacgaggaaattggtttctg
attggagaaccaggcaaatga

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