KEGG   Haliotis rubra (blacklip abalone): 124269839
Entry
124269839         CDS       T07967                                 
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase COP1-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
hrj  Haliotis rubra (blacklip abalone)
Pathway
hrj04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:hrj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    124269839
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hrj04121]
    124269839
Enzymes [BR:hrj01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124269839
Ubiquitin system [BR:hrj04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124269839
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     124269839
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd EIF3I zf-C3HC4_2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st zf-C3HC4 Beta-prop_EML WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 zf-RING_UBOX Beta-prop_Vps41 zf-RING_2 Beta-prop_DCAF4 zf-C3HC4_3 WD40_like Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N zf-C3HC4_4 Beta-prop_DCAF12 zf-RING_5 RING_XB3-XBAT31 Beta-prop_IFT140_1st WDR54 Sina_RING Beta-prop_SCAP zf-RING_6 Beta-prop_SPT8 zf-RING_10 U-box zf-rbx1
Other DBs
NCBI-GeneID: 124269839
NCBI-ProteinID: XP_046560831
LinkDB
Position
Unknown
AA seq 619 aa
MAGRTQQPPRRRKRVQTPVFSSIVGSYEDKDNDFVCPVCFDIIEEAHMTKCGHTFCFKCI
KQCLEKTNRCPKCNYIIDNAEHIFPNFTLNELILKYKGKQEEKKIKIEQQTCPGPADLVD
LVSEDNLDLANVNQLLEFLVHKKQQLEADGKLAENIILKEFLQRVRQGKQDELEKLNRDI
NLLDEDTKRVDDYINEQQEKYTACPDHLVPNGFEPIRPSINESICQDGFNGSKNAGKSFT
QTTMASRRKQISQHFEDLEQCYFDTRVKGVSTGDDSHDGLREFTDSLSKFTRFSSFRPLA
TLSYAVDLLNGGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIKDVVDIHYPVVEML
CNSKISCVTWSAYHKGMLASSDYEGTVTLWDAFTGSKARMFQEHEKRCWSVDFNRMDPKL
LASGSDDAKVKLWAINSEHSVANLEAKANVCCVKFNPESRYHLAFGSADHCVHYYDLRNT
KQAVGVFRGHRKAVSYAKFVNAQEIVSASTDSQLKLWNLSKPNAVRTFKGHINEKNFVGL
ATDGDYVSCGSENNSLYIYYKGLSKQLMTYKFDTVRSVLDKDRKDEDANEFVSAVTWRPR
SNVVVAANSQGTVKVLELV
NT seq 1860 nt   +upstreamnt  +downstreamnt
atggcaggcagaacgcaacaaccgccccgccggagaaaacgagtgcaaactcctgttttc
agtagcatagttggctcatatgaagacaaagacaacgatttcgtctgcccagtgtgcttt
gatataattgaagaggctcatatgaccaaatgtggacatacgttttgcttcaagtgtata
aagcagtgccttgagaagaccaacaggtgtcccaagtgtaactacatcatcgacaatgca
gagcatatcttcccaaactttacattgaacgaactgattctcaaatacaaagggaaacag
gaagaaaagaaaatcaaaattgagcaacagacttgtcctggtcctgctgatttggtagac
ttggtgtcggaagataaccttgaccttgctaatgtcaaccagctgctggagttcttggta
cacaagaagcaacaactagaagctgatggcaaattagctgaaaatattattctgaaagaa
tttctgcaacgagtacgacaagggaaacaagatgaactggaaaagttgaatcgggacatt
aacctcctagatgaggataccaaaagagtagatgattatatcaacgagcagcaagagaaa
tacacagcatgtccagatcaccttgtaccaaatggctttgaacctattaggccgtctatt
aatgaatccatatgtcaagatggttttaacggaagtaaaaatgcaggaaaatctttcact
cagacaacaatggcatctcggaggaaacaaatcagccaacattttgaagatcttgaacag
tgttactttgatacaagggtgaagggagtatctacaggggatgattctcacgatggactc
cgagagttcacagacagtctttcaaagttcactcgcttctcctcatttcgacctcttgct
actctcagctatgctgttgaccttctcaatggtggctccagtatagtatcaagcattgaa
tttgacagagactgtgattattttgccatagctggtgttacaaaaaagataaaagtatat
gaatatggtacagttatcaaagatgttgtagatatacattacccggtggttgaaatgctg
tgcaattctaaaataagttgtgtgacatggagcgcctaccacaaagggatgctggccagt
tccgattatgagggaaccgttacattatgggatgccttcaccggcagcaaggcacgaatg
tttcaggaacatgaaaagcgatgttggagtgtggacttcaacagaatggaccccaaactt
cttgcatccggttcggatgatgccaaagtaaagctatgggcaatcaactcagagcattct
gtagccaacctagaggccaaggcaaatgtgtgctgtgttaaattcaacccagagagcagg
taccatctagccttcggatctgcagatcactgtgtacattactatgatctacggaacaca
aaacaagcagttggagtcttccgggggcacaggaaagcagtgtcatatgccaagtttgtc
aacgctcaggaaatagtctcagcgtccacggacagtcagctcaagctgtggaatctgagc
aaacccaatgcagtacgaacgtttaaaggtcacatcaacgaaaaaaactttgttggtttg
gcaactgatggagactatgtctcatgtggcagtgagaacaactctctatatatctactac
aagggtctttctaagcaactgatgacatacaagtttgacactgtcagaagtgtgctggac
aaggatagaaaagacgaagatgccaatgagtttgtgagtgctgtgacatggagacctaga
tccaatgttgttgtggcagcaaacagccaaggaactgtcaaggttctggagctggtataa

DBGET integrated database retrieval system