Haliotis rubra (blacklip abalone): 124270290
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Entry
124270290 CDS
T07967
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03030
DNA replication
hrj03410
Base excision repair
hrj03420
Nucleotide excision repair
hrj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124270290
03410 Base excision repair
124270290
03420 Nucleotide excision repair
124270290
03430 Mismatch repair
124270290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrj03032
]
124270290
03036 Chromosome and associated proteins [BR:
hrj03036
]
124270290
03400 DNA repair and recombination proteins [BR:
hrj03400
]
124270290
DNA replication proteins [BR:
hrj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124270290
DNA Replication Termination Factors
ELG1-RFC complex
124270290
Chromosome and associated proteins [BR:
hrj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124270290
DNA repair and recombination proteins [BR:
hrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124270290
Check point factors
HRAD17(Rad24)-RFC complex
124270290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_11
RCF1-5-like_lid
AAA_24
RuvB_N
AAA_22
AAA_assoc_2
AAA_14
AAA_5
AAA_16
DUF815
ResIII
DEAD
AAA_7
AAA_30
DNAX_ATPase_lid
PhoH
Mg_chelatase
ATPase_2
bpMoxR
AAA_2
AAA_19
TIP49
Gp44_lid
AAA_28
AAA_3
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
124270290
NCBI-ProteinID:
XP_046561286
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MLDKTDSKDSSNLPWVERYRPKKLEDLISHADIINTIERFVAEERLPHLLFYGPPGTGKT
STILAVAKQIYSPKEFNSMVLELNASDDRGIGIVRNQILSFASTRTIFKSGFKIVILDEA
DAMTRDAQNALRRVIEKFTENTRFCIICNYLSKIIPALQSRCTRFRFGPLSTHQMVPRLE
HVIAQEGINVTEDGMKAVVTLATGDMRKSLNILQSASMAYEEVNEDNVYTCVGHPLRRDI
ENIVNWVLNENFTAAYNNISHLKVAKGLALQDILTEVHQYVHLVDLPIHVRVYLLEKLAD
IEYRLASGTSEKIQLSSMIAAFQTARDLLVSEAK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgttggataaaactgattcgaaggacagttcgaatttgccatgggtcgaaaggtatcgt
ccaaagaagctcgaggatctgatatcgcatgctgacataattaacacaattgagagattt
gtggcagaagagagactgccccacctgctgttctacggacctccaggaacaggcaaaacc
agcacaatcctggctgtggcaaaacagatctactcacctaaagagttcaactctatggtc
ctcgagctgaatgcgtcagatgacagaggtatcggcatagtcaggaaccagattctcagt
tttgccagcacaaggacaatcttcaagtctggctttaagatagtcattctggatgaagct
gatgctatgactcgggatgctcagaatgctctcaggagagtgattgagaagttcacagag
aacacccgattctgcatcatctgcaactatctgtccaagatcatcccagccctgcagtct
cgatgtacccgctttcgattcggtccgctgtccacacatcagatggtgccgcgactggaa
catgtcatagcacaggaggggattaatgtgacagaagatgggatgaaggctgtggttacc
ctggcaactggagacatgaggaagtctctcaacatcctacagagtgcgtccatggcctac
gaggaagtaaatgaagacaacgtgtacacctgcgtgggacatcctctcaggagggacatc
gagaacatcgtcaactgggtcctcaacgaaaacttcacagcggcgtacaacaacatcagc
cacctgaaggtggccaaaggcctggccctccaggacatcctgaccgaggtccaccagtac
gtccatctagttgacctgccaatccatgtgcgagtctatctgctggagaaactggctgac
atagagtatcgcctggcatcaggaaccagtgagaagatccagctgagctccatgattgct
gcattccagactgcacgagacctgctggtcagcgaggccaagtga
DBGET
integrated database retrieval system
