Haliotis rubra (blacklip abalone): 124270895
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Entry
124270895 CDS
T07967
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124270895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124270895
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124270895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
124270895
NCBI-ProteinID:
XP_046561917
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MADVAAVPAPGAAPAEDDETWLYGDENKEQKDPEKDGQKKKKKGDGDGSEKPEDKEEGEM
SGEEDAQAKNDDDDSDDDDNVQVTIGDIKQWTVTETPRNLFKSATGYQKPAAGVAAAQKT
VVPGKGMDLEAQGTVNGVPTFEFDIDNLSAEDKPWRNPGADITDYFNYGFNEDTWLQYCE
KQRRLRLENGVPLLGNKSQSRDSHSHHSHIGSGQPISRLGDKDSGQTGSSIPTTSSIRKA
QPPPNRKLGGTIDVIGSTVHDSRRPGQGSTSSSIPVTGVTPDYRKFQPPSVPPPGMPPMM
PDYSMPPPGMPPPLGLPPPGVPPPPGVAVPLPTPYGSEQYDPFSHPPPGFNYESNTFTPN
YTEGHHQNFQSYDDRWKYSSDRHTRDRSPDQEFGSRDNYWRDRERDRERDRSDRDRERDR
DPYRERDRGRDRGKRTRQRPRQKKVKVN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgttgcggcagtaccggcgccgggcgctgcaccggccgaagacgatgaaaca
tggctttatggtgatgaaaacaaagagcagaaggatccagagaaagatggccagaaaaag
aaaaagaaaggtgacggagatgggtctgagaaaccagaagacaaggaagaaggggagatg
agtggggaggaagatgctcaggcaaagaatgatgatgacgattcagatgatgacgacaat
gtccaagtcaccattggcgacatcaaacagtggactgtcacagaaactcccaggaacctg
tttaagagtgccactggctaccaaaagccagcagcaggagtggcagcagcacagaagaca
gtggtgccaggaaaagggatggaccttgaagcccagggcactgtcaatggagtgcctaca
tttgagttcgacattgacaatctctcagctgaagacaaaccctggagaaatcctggggct
gacatcactgactacttcaactatggcttcaacgaggacacctggctgcagtactgtgag
aaacagcgacgactacgtctggagaatggagtgcccctccttggcaacaagtcacagtcc
agggacagtcactctcaccactctcacattggttctggtcaacccatcagtcgtctcggg
gacaaggactctggacagactggatccagcatacctactacaagttcaataaggaaagct
cagccaccgccaaatagaaaattgggaggtaccattgatgtgattggcagcacagtccat
gattctcgacgcccaggtcaagggtcaacatccagttccatacctgtcacaggggtcact
ccggactatcgaaagttccagccaccatcagtacctccaccagggatgccgcccatgatg
cctgactactccatgcccccaccagggatgcccccacccctcgggctgcctccaccagga
gtgcctccaccaccaggtgttgctgtacctctcccgacaccatatggctcagagcagtac
gatcccttcagccacccccctcctggtttcaactacgagagcaacaccttcactccaaat
tacacggaaggacatcaccagaacttccaaagctacgacgatcgatggaagtacagttct
gaccgacacacacgagatcggagtccagaccaagagtttggaagcagggacaattattgg
cgagaccgggaacgtgaccgagagagagaccgcagtgacagggatcgggaacgggatcgg
gacccttatcgtgaaagagacaggggtagggaccggggaaagagaacgagacagagaccg
agacaaaagaaggtcaaggtcaactga
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