Haliotis rubra (blacklip abalone): 124271013
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Entry
124271013 CDS
T07967
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124271013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124271013
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124271013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
124271013
NCBI-ProteinID:
XP_046562031
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MADIAAVPAPGAAPAEDDETWLYGDENKEQKDPEKDGQKKKKKGDGDGSEKPEDKEEGEM
SGEEEAQAKNDDDDSDDDDNVQVTIGDIKQWTVTETPRNLFKSATGYQKPAAGVAAAQKT
VVPGKGMDLEAQGTVNGVPTFEFDIDNLSAEDKPWRNPGADITDYFNYGFNEDTWLQYCE
KQRRLRLENGVPLLGNKSQSRDSHSHHSHIGSGQPISRLGDKDSGQTGSSIPTTSSIRKA
QPPPNRKLGGTIDVIGSTVHDSRRPGQGSTSSSIPVTGVTPDYRKFQPPSVPPPGMPPMM
PDYSMPPPGMPPPLGLPPPGVPPPPGVAVPLPTPYGSEQYDPFSHPPPGFNYESNTFTPN
YTEGHHQNFQSYDDRWKYNSDRHTRDRSPDQEFGSRDNYWRDRERDRERDRSDRDRERDR
DPYRERDRGRDRDRDRDRDRDKRRSRSTDRDDSRHRDDKHRTRRKHRDDEDDHHRSKHRK
SKKRRDKDEEGGDSVTTADEGDKGE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggccgatattgcggcagtaccggcgcctggcgctgcaccggccgaagacgatgaaaca
tggctttatggtgatgaaaacaaagagcagaaggatccagagaaagatggccagaagaag
aaaaagaaaggtgacggagatgggtctgagaaaccagaagacaaggaagaaggggagatg
agtggggaggaagaagctcaggcaaagaatgatgatgacgattcagatgatgacgacaat
gtccaagtcaccattggcgacatcaaacagtggactgtcacagaaactcccaggaacctg
tttaagagtgccactggctaccaaaagccagcagcaggagtggcagcagcacagaagaca
gtggtgccaggaaaagggatggaccttgaagcccagggcactgtcaatggagtgcctaca
tttgagtttgacattgacaatctctcagctgaagacaaaccctggagaaatcctggtgct
gacatcactgactacttcaactacggcttcaacgaggacacctggctgcagtactgtgag
aaacagcgacgactacgtctggagaatggagtgcccctccttggcaacaagtcacagtcc
agggacagtcactctcaccactctcacattggttctggtcaacccatcagtcgtctcggg
gacaaggactctggacagactggatccagcatacctactacaagttcaataaggaaagct
caaccaccgccaaatagaaaattgggaggtaccattgatgtgattggcagcacagtccat
gattctcgacgcccaggtcaagggtcaacatccagttccatacctgtcacaggggtcact
ccagactatcgaaagttccagccaccatcagtacccccaccagggatgccgccgatgatg
cctgactactccatgcccccaccagggatgcccccacccctggggctgcctccaccagga
gtgcctccaccaccaggtgttgctgtacctctcccgacaccatatggctcagagcagtat
gatcccttcagccacccccctcctggcttcaactacgagagcaacaccttcactccaaat
tacacggaaggacatcaccagaacttccaaagctacgacgatcgatggaagtacaattct
gaccgacacacacgagatcggagtccagaccaagagtttggaagcagggacaattattgg
cgagacagggaacgtgaccgagagagagaccgcagtgacagggatcgggaacgagatcgg
gacccttatcgtgaaagagacaggggtagggaccgggatagagaccgagacagagaccga
gataaaagaaggtcaaggtcaactgatagagatgattctcgtcatagagatgataagcac
agaacacgaagaaagcatcgagatgatgaggacgaccaccatcgatccaagcacaggaag
agcaagaagcgaagagacaaggatgaggaagggggagactcggtgactacagctgatgaa
ggggataaaggggagtga
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