Haliotis rubra (blacklip abalone): 124271847
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Entry
124271847 CDS
T07967
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33-like
KO
K15542
polyadenylation factor subunit 2
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124271847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124271847
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124271847
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
eIF2A
Beta-prop_ELP1_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_WDR41
WD40_RFWD3
Tricorn_2nd
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_DCAF12
PROPPIN
Motif
Other DBs
NCBI-GeneID:
124271847
NCBI-ProteinID:
XP_046562953
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
MFDGKRMRKAVHRKTVDYNTSVIKYLHNRVWQRDRRDAVSIQPDPLYQIDLEPPMATMEN
PINSVTTKFVRTSTNKFRCPIFCVTWTPEGRRLVTGASSGEFTLWNGLAFNFETILQAHD
TSVRAMRWSHNDMWMVTADHAGFIKYWQSNMNNVKMYQGHKEAVRGISFCPSDNKFTTCA
DDGTVRVWDFMRGHEERILRGHGADVKSVDWHPQKALIASGSKDNQQPIKLWDPRSGQSL
ATIHAHKNTVMDLKWNRNGNWLLSASRDHLLKLFDIRNMKEEIHTFKGHKKEATAIDWHP
IHEGLFASGGSDGALMFWMVGCDREVGSMEEAHEGMVWSLAWHPLGHILASGSNDHSTKF
WTRNRPGDTMRDKYNLNNLPSGTEQELLEYDLEPQLMPSLPGMGLEHGLPPHLRPKENVE
EELPSIPGLDWSADEPFLRQYERDSAPKKKVPYARPIPKSFENAWKGNKQSGVLVPEEQE
GQPEKPSSRNDPRRRDRKERHGRNRSPDRGSNRHGRDQGGRDHDQGQDQGQRSHQFQGQM
QKGPQGQMLQGHHNQMQQQNAMGQPQNYQGGPNQQMQPNQFQGASQGFVQNQMQGQGQFR
QGPGFHQMQGMMGMQGPPGMMQGQGGQFMGQQQMGGMQQQFGGQNMQQGIRMPQQQQQQQ
QQQQQQQQQRQRPDSQQQRGGPGQQYGSQQNNGNGDMDLRGQWSGGRGQGQRGGADEDFR
QRSNQQQQFGQDRREGFGGDQRRFASGGGGSGAGAGGGGGGGGGSWEGDMDLRQQRSEEG
RGQFQGRQQNVDVDDRYGRRGGGDVDERHQGGRQGGRGGGRMGGGMYDNQQGGRGGGGGD
RSGQDRGMQDRGGQGFYDRQDQDSPMSQGRKRGYDEGPGGMSGRGGGQGMGQGGYGGNQG
DRASKFGRTGNESNWQDQGMQGGGGGGGSGGMYNRGMDQQRGGFRGSPQGRGGGGGFRGR
DGGFRGGRGR
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatggcaaacgaatgagaaaggctgtacataggaaaactgtggattacaacact
tctgtgataaaatatttacataaccgagtctggcaaagggatcgtagagatgctgtatca
attcaaccagatcccctctatcaaatagatctggaacccccaatggccacaatggaaaat
cccattaactcggtgacaactaagtttgtaaggacgtcaaccaacaagttccgctgtccc
atcttctgtgtgacttggacaccagaaggtcggcgtttggtaactggagcctccagtgga
gagtttacactgtggaatggactggcatttaacttcgagacgatcctgcaggcccatgac
acttctgtacgagccatgagatggagtcacaatgacatgtggatggtgaccgctgaccat
gcaggcttcatcaagtactggcagtccaacatgaacaacgtgaagatgtaccagggtcac
aaggaggcagttcgagggatcagtttttgcccaagcgacaataaatttacaacatgtgca
gatgatggaactgttcgtgtttgggactttatgagaggtcatgaagagagaattctacga
ggccatggtgcagatgtgaagtcggtggactggcatccacagaaggcacttattgcctct
ggcagcaaggacaaccagcaacccatcaaactctgggatccacggtcgggacagagtctt
gctaccattcatgctcacaagaacactgtaatggatctgaagtggaaccggaacggcaac
tggctgctgtcagcatcccgagatcatctgctcaaactttttgacattcggaacatgaag
gaagagatccacacgttcaagggacacaaaaaggaagccactgctattgactggcatcct
atccatgaaggcctgtttgccagtggagggtcagatggtgctctcatgttctggatggtt
ggatgtgacagggaagtaggtagtatggaggaagctcatgaagggatggtgtggagcttg
gcttggcatccactcggacacatcctggcatcaggatctaatgaccacagcacgaaattc
tggactcgaaatcgtcctggtgacacgatgagagacaagtacaacctgaacaacttacca
agtggcacagagcaggagcttcttgaatatgatctggagccccagttgatgcccagtttg
ccaggaatgggtcttgagcatggtcttccaccacatctcagaccaaaagaaaatgtggag
gaggaactgccgtctatacctggtctggactggtcagcagatgagcctttcctgaggcag
tatgaacgtgacagtgcgccaaagaaaaaagtgccatatgccagaccaattcccaagtct
tttgagaatgcatggaaaggcaataaacagtcgggggttctagtccctgaagagcaagag
ggtcaacctgaaaagcccagttcacggaatgacccaaggagaagggacagaaaagaaagg
catggtcgaaacaggagtccggatcgtggttcaaataggcatgggcgtgatcaaggtggg
agggatcatgatcaaggtcaagatcaaggccagaggtctcaccagtttcaaggtcaaatg
caaaaaggacctcaaggtcaaatgttgcaaggtcatcataaccaaatgcagcagcagaac
gccatgggacaacctcagaattatcaaggtggcccaaatcaacaaatgcaacccaatcag
tttcaaggtgcatctcaaggtttcgtgcagaatcaaatgcaaggtcaaggtcagtttaga
cagggaccaggattccatcaaatgcaaggcatgatgggaatgcaaggccctccaggcatg
atgcaaggtcaaggaggtcagttcatggggcaacaacagatgggaggaatgcaacagcag
tttggaggtcaaaatatgcagcagggaattagaatgccacagcaacagcagcagcagcag
cagcaacaacagcagcagcagcagcagcggcaacggcctgactcgcagcaacagagaggt
ggtccaggacaacagtatgggagccagcaaaacaacgggaatggagacatggatttgaga
ggtcaatggtcaggtgggcgtggccaaggacagaggggcggggctgatgaagactttcgt
cagcgaagcaaccagcagcagcagttcggccaggacaggagagaaggatttggtggtgat
cagcgtcggtttgctagtggtgggggtggaagtggtgctggtgctgggggtggtggtggt
ggtggtggtggaagttgggagggagatatggacttgcggcagcagaggtcggaagaggga
aggggacagtttcaagggaggcagcagaacgtggatgttgatgataggtatggacgaagg
ggtggaggtgatgtagatgagaggcaccaaggagggaggcagggtggaaggggagggggg
cgtatgggtggaggcatgtatgacaatcaacaaggagggagagggggtgggggtggggac
agaagtggacaagataggggaatgcaggataggggagggcaagggttttatgacagacag
gatcaggatagtccgatgtcccaagggaggaagaggggctatgatgagggtcctgggggt
atgtctggtcggggtgggggacagggaatgggacagggggggtatggtgggaaccaaggt
gacagggcatcaaagtttggccggacaggaaatgaatcaaattggcaggatcagggaatg
caaggtggaggtggaggaggagggagtggtgggatgtacaaccgcgggatggaccaacaa
agaggcgggttcagggggagtccacaaggtagaggtgggggagggggtttcaggggaagg
gacggagggttcaggggaggcagaggtagataa
DBGET
integrated database retrieval system
