Haliotis rubra (blacklip abalone): 124272278
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Entry
124272278 CDS
T07967
Name
(RefSeq) vacuolar protein-sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124272278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrj04131
]
124272278
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrj04147
]
124272278
Membrane trafficking [BR:
hrj04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
124272278
Exosome [BR:
hrj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124272278
Exosomal proteins of colorectal cancer cells
124272278
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Flu_M1_C
Motif
Other DBs
NCBI-GeneID:
124272278
NCBI-ProteinID:
XP_046563400
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MDRLEWSDGSLIGGETLVEQQTGVCLYDGHDKTSFEYGVLSLTTHRLLWRDHRNRNCVVA
LPLALVVYLEEQASGFAKSAKIIVHLSQTPPNKPSGPTSHSPHSFIRLSFREAGQKEFFR
RFQTELEQKRWEQKVQSAAPHPSLPRHRPGIVGIERSIQKKHHETNKNISVAFEDLSKLI
EKAKEMVHLSRTIATKIKDKQGDITEDETVKFKSYLLSMGIPNPVTRETHGTGDKYYVEL
AKQLVSVLEKPVEEAGGMMTLTDVYCRVNRARGMELLSPEDLLHACELMELLRLPVRLRT
FDSGVMVLQSKSQNEEEVITKTSSLVEEKGSLTAEDLAKVVGVSVILAKERLLLTEKVGG
ICRDETVEGLKFFPNLFLTQPV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcttggaatggagtgacggatctctaattggcggagagacgttagtagagcaa
cagacaggcgtttgtctttacgacggacatgacaagacatcctttgaatatggtgtgctg
tcgttgacaacccacagacttctatggagagaccaccgaaacagaaactgtgtggttgca
ctaccccttgctctcgtggtctatctggaagaacaggcttcaggctttgccaaaagtgcg
aagatcatcgtccatctgagccagacccctcccaacaagccatctggccccacctcccat
agcccacacagcttcatcaggttgtccttcagggaggcaggccagaaggagttcttccgg
cgtttccaaactgagttggaacagaagagatgggaacagaaagtgcaatctgcggcaccc
catccatcgctgcctcgtcaccgccccggcatcgtcggcatcgagagatccatacagaag
aagcaccatgaaacaaacaaaaacatatccgtggcattcgaggatctcagtaaactcatt
gaaaaggctaaagagatggttcatttgtcaagaacaatagccacgaagatcaaggacaag
caaggggacataactgaagatgaaacggtgaagttcaagtcgtatctgctaagtatgggc
attccgaaccctgtgacgagagagacacatgggacaggggacaagtactacgtagagctg
gcaaaacaacttgtctcagtgctggagaaacctgtagaggaggctggtgggatgatgacc
ttgactgatgtctactgtcgtgtgaacagagccagaggaatggagctgctgtccccggag
gacctgctgcatgcctgtgaactgatggaactcctcaggctgcctgtcagactgcggaca
tttgacagtggtgtgatggtgttgcagtctaaaagtcagaatgaagaggaggttatcaca
aagacaagctctctggttgaagaaaagggctccctgacagctgaggatctggctaaagtg
gtgggcgtctccgtgatactagctaaagaaagattattacttactgaaaaggttggagga
atatgtcgagacgaaactgtagagggactgaagttttttcctaatttattcctcacacag
cctgtgtga
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