Haliotis rubra (blacklip abalone): 124273259
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Entry
124273259 CDS
T07967
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hrj01002
]
124273259
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrj04121
]
124273259
Enzymes [BR:
hrj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124273259
Peptidases and inhibitors [BR:
hrj01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124273259
Ubiquitin system [BR:
hrj04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124273259
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
TcaA_3rd_4th
Ubiquitin_TPR1
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
124273259
NCBI-ProteinID:
XP_046564429
LinkDB
All DBs
Position
Unknown
AA seq
2403 aa
AA seq
DB search
MVFSPQCKFHTYNGTRPSESVPAGTQPSEESLFARPPDPRTPRGWLVDLVNKFGGLEGFQ
ILLDRFIKAPALSVPIIAALIKPFGQCAEVLTPHTVQKYFMPIVDIVPKFLDKLTDDELK
KESKTEAKNDALSSIIKALKQLVYRLPNQDETIKELEIFRLKMILRLLQISSFNGKMNAL
NEVNKVITNVSFHASRHTQVEEDEWLTAEKMAEWIQQNNVLSIVLRDSLHQPQYVEKLEK
ILRFMIKEKALTMEDLDRLWEAQSGKHDAIVKNVHDLLAKLAWDFTPEQLDHLFECFQGS
WNNATKKQREKLLELIRRLAEDDKEGVMAHKVLTLLWNLAHSDDVPTEIMDQALTAHIKI
LDYSCSQDRDAQKMQWINRFVEELKNDKWVLPSLKQIREICQLFPEAPQNFPHTQRSPHM
YYRNSVIGQLQNQHSIVMLVSQNLSAYMNKARQHNKEHPEEEPLHILPDGRFNHVMQVQE
RLRFLRFLLKDGQLWLCEPQARQIWHCLAENAIYITDRESCFKWFAKLMGEEPDLDPEIT
RDFFERNILQLDPALLTENGMNCFERFFKQVNLKENKLIAKRRGGHMMDDLELIGLDYMW
RVVLWSPDEVAEKAIALLKDIFTNLGPRLQQNQIEIHEDFIQSCVDRLKASFDTVSVLEK
DADSTSRVMQETIRMVRILTVLKEYVAECDEAYGEERTILPLSRACRGKLVTLKVRFPNQ
GRQVEDLEVWSHSNDTVGSLRRYILSRVKANANNIKVDLYVNGEQLDPSEDKKLISQIPL
RDKMTVTAKLVQVGSNMPSSPDSSSDSSVGSPHNAYDGPNVEAENSLPGVLMAQDPRYAQ
FLFQLSDLGGQLQVPKLRDTARAVLKLMPADGTTVQKFRGICSENAKADGSVAVSLEALF
FNSSPTQVLYNIETAYSLLMPAVDPLVEEAFEFQLNFVRSGGVQLSINMLTKNNFLPNAD
LPTRRAAYLTVLKVCKLMLTTVGHAKVQVVVDACHAESQVPAVSVVEHNQAAALQQALLH
IPSPDAEFTTRNVALRLGQNLGEQATSVLPDLATVKSIQKIAWAASSCSLHLVHASIEDI
HRAHEKPKDYVPSDMEDIGVAREALEVLTVCLALFPAALDALHKDKAWQCFIIDLLLLCR
SSRSVRICATDQFFLMATRCSTSHRPQHFMITLLFTVLSTTAKDNAKQSHEYFQLLCRLL
SYAFASEASLSTAEALLNNEIAWLKRVRDFVLNGSEVQTEEALLEGHLGITRELLAFQSP
EKKFNIGSEKGGSNLIREIVEDFIFPASKIVLQCRKLNGDFPAEQAVPVCSSPVTVIAAF
DLLVALCTGCVHNLRFLAAMVIDMYYTNETPLSEWEYLPPVGPRPSKGFVGLKNAGATCY
MNSVLQQLFMIEPIRNGILGVEGAADDIEEEFMNDEKAEGETNVDMSEEEKKDDDKGNKV
EERKDYHMGVLKQIQVIFGHLAASRLQYHVPRGFWKHFKLWGEPVNLREQHDALEFFNSL
VDSLDESLKALGHPMAMTKVLGGSFADQKICKDCPHRYQREEAFTTLNVDIRNHQNLFES
LEQYVKGDLLEGANAYHCEKCNKKVDTVKRLVIKKLPKILAIQLKRFDYDWERECAIKFN
DYFEFPRKFDMEPYTVQGLAKIEGEIIDGDLDENPQSTKYKLIGVVVHSGQASGGHYYSY
ILHRGAADPHPKWYKFDDGDVTECKMDDDDEMKNQCFGGEYLGEVYDHMLKRSAVRRQKR
WWNAYILFYERIDEDEKEEILSKEFLKLSLSSTVAHVKMPSAIDRLVRKQNILFMHEKNQ
FSMEYFQFMKKLLTCNHITLNHAIQEKMTQEAEQIAMISVELASKFLFNVGFHTKKTLRC
SASEWYDALHIHLRYSKSVRSWFAHNVLFAHPSRFAEYLLECPSSEVRSAFAKIIVILAH
FSLQDGPCPPPLVQGLYAAGQAADPNATLSDHLLVAVLALMRKEVSEHGRHLQQYFHLFL
MYLNLGIQEKQQLLRLNVPAQFIMVALDEGAGPPIKYQYAELSKLYSVVSHLVRCCDVSA
RCQCSVNGQPPLPNPHGDQHCPQPLMEIQSQVEEVLFGRTSYVKKLIEECNNTEDTTKLL
KFCCWENPHFSSTVLSELLWQVAYSYTYELRPYLDLLLQMLMLEDSWQNHRIHNALKGIP
DDRDGLFDTIQRSKNHYQKRAYQCIKMMVALFTHCAPAAQMLQSNGDLKRKWSGAVDWLT
DELERRPYPGNAQYTYNNWSPPAQSNETSNGYFLERSQSARITLAKAYELCPEEEQEEGE
LTDEQEVANQEDQVPGFPQQPGNQPQPQPQPQPQPQPQGSQQQQPSQQQQQQQQAPQPQQ
HVQNNQIHMQPVAHPVQPSNQINNQLNQQGQQQAPNPGNQPPPTDNQETGEEGGDNSHRG
GSE
NT seq
7212 nt
NT seq
+upstream
nt +downstream
nt
atggttttcagtccccagtgcaaattccacacttacaatggaactcggccatcagagagt
gtaccagctggaacccaaccatcagaggaatctctgtttgcaagacctccagacccaaga
actccaaggggatggctggttgatttagtcaacaagtttggaggcctagaaggttttcag
attcttctggacagattcatcaaagctccagctctctctgtaccaattattgctgcactt
attaaaccatttggacaatgtgctgaagtactgacaccacacactgtacagaaatacttc
atgcccattgtggatatcgtaccaaagtttcttgataaactgactgatgatgaactaaag
aaggaatcaaagactgaggcaaagaatgatgctctgtcttcaatcatcaaagcactgaaa
cagcttgtataccgacttcccaaccaggatgaaacaatcaaagaactggagatatttaga
ctcaagatgatactaagactgctgcagatatcatcattcaatggcaagatgaatgcactt
aatgaagtgaacaaggtgataaccaatgtgtcattccatgctagtcgccatacccaggtg
gaagaagatgagtggctaacagcagagaaaatggctgaatggattcagcagaacaacgta
ctgtcaatagttctccgagacagcctgcatcagcctcagtatgtggagaagctggagaag
atcctccgcttcatgatcaaggagaaggccctcaccatggaggatctggaccggttgtgg
gaggcgcagtcagggaaacatgatgccattgtgaagaatgttcatgacctgctggccaaa
ctagcatgggattttacccccgaacagctggaccatctgttcgagtgcttccagggtagc
tggaataatgctactaagaaacagcgtgagaagctcctggagttgatccgtcgtcttgcc
gaagatgacaaggaaggtgtgatggcccacaaggttctcactctactgtggaatctagcc
cacagtgatgacgtccctacagagatcatggaccaagctctcactgctcatatcaagatc
ttagactacagctgctctcaggaccgagatgctcagaaaatgcaatggatcaacaggttt
gtggaggagctcaaaaatgacaagtgggtgttgccatcattgaagcagatccgggagata
tgtcagctgttcccagaagccccacagaacttcccccacacacagaggtctccccatatg
tactacaggaacagtgtcattggtcagctgcagaatcaacattcaattgttatgcttgtt
tctcagaatctctccgcatacatgaacaaagccagacaacataacaaagaacatccagaa
gaagagcctcttcacattctccctgatggaagattcaatcatgtcatgcaagtgcaagaa
agacttagattcctccgattcctgttgaaggatgggcagttatggctgtgtgaacctcaa
gcaagacagatctggcactgtttggctgagaatgcaatttacatcacagacagggaatca
tgtttcaaatggtttgcaaagctgatgggagaagaaccagatctggatcctgaaatcaca
agagatttctttgagaggaacattctacagcttgaccctgcactgctcacagaaaatgga
atgaactgttttgaaaggtttttcaagcaagtgaatctaaaggaaaacaagctcattgcc
aaacgaagaggaggccacatgatggacgacctggagttgataggactggattacatgtgg
agggttgtgctatggagtccagatgaagttgctgaaaaagcaattgctcttttgaaagac
atttttacaaaccttggaccaaggttacaacagaatcaaattgagattcatgaggacttt
atacaatcatgtgtggatagactaaaagcctcgtttgacacagtgagtgtgttggaaaag
gatgctgatagcactagtagggtgatgcaggagacaatacgcatggtcaggatactcaca
gtgctgaaggagtatgtggcagagtgtgatgaagcttacggggaggaacgtaccatcctt
cctctcagcagagcatgtcgtggcaaactagtaactcttaaagttcggttccccaatcag
gggagacaagtcgaagatctggaggtatggtctcacagcaatgatacagttggttcatta
cggagatatatcttatcaagagtcaaggccaatgcaaacaacatcaaagtagatctctat
gtcaatggtgaacagctagacccaagtgaagacaagaaactaatttcacagattcctctt
agagacaagatgactgtaactgccaagctagttcaagttgggagcaacatgccctcaagc
ccagacagtagctctgacagctctgttgggtcacctcacaatgcctatgatggacccaat
gtggaggctgaaaacagcctgccaggagtgctgatggctcaagaccctcgatatgctcag
tttctcttccaactgtcggacctgggtggtcagctgcaagtacccaagctacgagataca
gccagagcagtactcaagctgatgccagctgatgggactacagttcagaaattccgagga
atttgttctgagaatgcaaaggctgatggatcagttgcagtgagcctggaagcattgttc
ttcaattcttctcctactcaagttctttataatattgagactgcttacagtttgcttatg
cctgcagtggatccattggttgaagaagcctttgagtttcagttgaactttgtgagaagt
ggaggtgttcaactttccatcaacatgctgaccaagaacaactttctgcctaatgctgac
ctgccaacacgaagagctgcatacttgacagttctgaaggtgtgtaagttgatgctgacg
acggtgggccatgcaaaggtgcaggtagtggtggatgcttgtcatgcagagtcccaggtg
ccggctgtgtcggtagttgaacacaaccaggctgcagcgttacagcaggctcttctacat
attcccagtcctgatgctgagttcacgaccagaaatgtagcattgagacttgggcagaat
ctaggagaacaggccactagtgtgttaccagacttggcaactgtgaagtccatacagaag
atagcctgggcagctagtagctgttctcttcatcttgtccatgcctcaatagaagacata
cacagagcacacgagaagcctaaagactatgtgccctctgatatggaggatattggagtg
gcccgagaagctctagaagtgctgacagtatgcctggccctgttccctgcagctcttgat
gctctccacaaagacaaggcctggcagtgtttcatcattgatctgctgctcctctgtaga
agcagccgatctgtgaggatctgtgccacagaccagtttttcctgatggccacacgatgc
agtacaagtcacagaccccagcatttcatgattactctgctcttcacagtattgtcgaca
accgcaaaagacaatgcaaaacagtcacatgagtatttccagcttttatgtaggttatta
agttatgcatttgcaagtgaagctagtctctctacagcagaagcattgctgaataatgaa
atagcatggttgaaaagagtcagggactttgtgttgaatggatccgaggtgcagacagag
gaggcattacttgagggtcacttaggcatcacacgagagcttcttgcgttccagtcccca
gagaagaaattcaacataggctcagaaaagggaggatctaatctcatcagggaaatagtt
gaagattttatcttcccggcatccaagatagtgttacagtgtcgcaaattgaatggtgat
tttccggcagagcaggctgtgcctgtctgctcttcccccgtgactgtgatagcagctttt
gatctcctggtagcgctgtgcactggctgcgtgcacaacctgcgcttccttgccgccatg
gtcattgatatgtattatactaatgagactccactgtcagagtgggagtacttacctcca
gttgggccaaggccatccaaaggctttgttggtttgaagaatgctggtgcaacatgttac
atgaattctgtattacaacaattgtttatgatcgagccaatccgcaatggtattctgggt
gtggagggtgcagctgatgacattgaggaagagttcatgaatgatgaaaaggcagaaggg
gagacgaatgttgacatgagcgaggaggagaagaaggatgatgacaaggggaacaaggtg
gaggagaggaaagactatcacatgggggtactcaaacagatccaggtcatcttcggccat
ctcgccgcaagcaggctacagtatcatgttccgaggggattctggaaacacttcaaatta
tggggggagcctgtcaacctgagagagcaacatgatgctttagaattcttcaacagtcta
gtcgacagcttagatgaaagcttaaaggctttaggtcacccaatggcaatgacaaaggtt
ttaggaggatcatttgctgatcagaagatttgtaaagattgtcctcataggtatcaaagg
gaagaagctttcacaactctgaatgtagatattaggaatcatcaaaatctgtttgagtct
ctagaacagtatgtcaaaggagacttgttagaaggtgccaacgcatatcactgtgagaaa
tgcaacaagaaggtggatacagttaaaagacttgtgataaagaaactgccaaaaatcctg
gccatccagttaaagagatttgactatgactgggaaagggaatgtgcaatcaagttcaac
gactactttgaatttccacggaagtttgacatggaaccctacacagttcaaggtcttgcc
aaaatagaaggagaaataattgatggcgatctagatgaaaatccacagagtaccaagtac
aagttgataggtgtggttgttcacagtggccaggccagtggagggcattactactcctat
attctacacaggggtgctgctgatcctcatccaaagtggtacaagttcgatgatggagac
gtcacagagtgcaagatggatgatgatgatgaaatgaagaaccaatgttttggtggagag
tatttgggagaagtgtatgaccacatgctaaaaagatctgcagtcaggcgccaaaaaaga
tggtggaatgcatacattctgttctacgagaggattgatgaagatgaaaaggaagagatt
ttgtcaaaagaattcttgaaactctcattatctagtacagtggcacatgtgaagatgccg
tcagccatcgacagacttgttcggaaacagaacatcttgttcatgcatgagaagaaccag
ttctccatggagtacttccagttcatgaagaaacttctcacctgcaaccatatcacactc
aatcatgccatacaggagaaaatgacacaggaagcagaacagattgcaatgatcagtgtt
gagttagcatctaaattcctcttcaatgtgggctttcatacaaagaaaacactcaggtgc
tctgctagtgaatggtacgatgcactgcatatacacctgagatacagcaagagtgttcgc
agctggtttgcacacaatgtgctgtttgctcacccgtctagatttgcagagtatttacta
gaatgtccaagttctgaggtgcggagtgcatttgcaaagattattgtgatactggcacac
ttctccttgcaagatggaccatgccctccaccattggtacaggggctgtatgctgctgga
caggctgcagaccccaatgccacactgagtgatcacctgctggtggctgtgctagctctc
atgaggaaggaggtgtcagaacacggcagacatctgcagcaatacttccacctcttcctc
atgtacctcaaccttggcatacaggagaaacaacagttgcttcggttgaatgtgcctgct
cagtttataatggtggccctggatgagggtgccggccctcccatcaagtatcagtatgct
gaactcagcaagctctactcagtagtgtctcatctagtgcggtgctgtgatgtgtcagca
aggtgtcagtgctcagtcaatggtcagcctcctctgcccaacccccatggcgaccagcac
tgccctcagccactgatggagatccaatctcaagtggaggaggtgctgtttggccgcaca
agctacgtcaaaaaactcatcgaggagtgtaacaacacagaagacaccaccaagttgctg
aagttctgttgctgggagaaccctcacttctcttccacagttctcagtgagcttctctgg
caggttgcctattcctacacatatgagctcaggccatacttagatcttctcctacaaatg
ttgatgctggaagactcctggcagaaccacaggatacacaatgcactgaaaggcatccca
gatgatagggatgggctgttcgacacaatccaaagatcaaagaatcactaccagaagaga
gcataccagtgtataaagatgatggttgcactcttcacacattgtgcacctgctgctcag
atgctacaaagtaatggagatctcaaacggaaatggagtggggctgttgactggttaaca
gatgagttggagagaagaccatacccagggaatgcacagtacacgtacaataactggtcc
ccacctgcacagtcaaatgaaacatcaaatggctacttcctggaaagatcacagagtgcc
agaatcacactagcgaaggcctacgagctttgtccagaagaggaacaagaggaaggggag
ctaactgatgaacaggaggttgccaaccaggaagaccaggttcccggattcccccagcaa
cctggcaaccagccacaacctcagcctcagcctcagcctcagcctcagccacagggctct
cagcaacaacagccatcccagcagcaacagcaacaacaacaagctccccaacctcagcag
catgtgcagaacaaccagatccacatgcagcctgttgctcacccagtgcaacccagtaat
cagatcaacaaccagctgaaccaacagggtcagcagcaggccccaaatccaggcaaccag
ccgccacccacagacaatcaggagacaggggaggaagggggagataactctcataggggt
ggcagtgagtga
DBGET
integrated database retrieval system
