Haliotis rubra (blacklip abalone): 124273285
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Entry
124273285 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIP12-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124273285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrj04121
]
124273285
Enzymes [BR:
hrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124273285
Ubiquitin system [BR:
hrj04121
]
Ubiquitin ligases (E3)
HECT type E3
124273285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
Arm
HEAT_2
XPD_arch
ARM_ARMC5
WWE_5
LCD1
Motif
Other DBs
NCBI-GeneID:
124273285
NCBI-ProteinID:
XP_046564479
LinkDB
All DBs
Position
Unknown
AA seq
1641 aa
AA seq
DB search
MLQGGTGQRESDGAQGATPTGAATPGSGGPTNMTSESESDDTDMGRLQALLEARGLPSHL
FGALGPRMHQLLHRTMSGGTMSKVQQLLQGLQASGDEGQQLTAVMEMCQLLVMGNEDSLA
GYPVKQVVPALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVDAVPVFLEKLQVIQ
CMDVAEQALTALEMLSRRHSKSILQAGGIAACLMFIDFFSISAQRSALTVTANCVQSLSS
EEFHYVRDSLPLLSGRLSHQDKKSVESVCLCFSRLVDNFQSDQRLLKEIAVHGLLSNIQQ
LLVVSPPVISTGTFVMVIRMLGVMCASCPDLAVVLLKQKIAETLCYLLIGASEQPEKNIE
LVSRTPQELYEIVCLTGELLPKLPNDGIFAIDSMLRKGRCVNTDSVIWQWQDDRAMWRPY
NTIDSKIVEAAYQAGEDEVSLSTMGRSYAVDFNSMQQINEDTGTARPVQRKLNPLAPASQ
QSSSATSVSSDPNLERCDSRAEILKEDSDLATAFIQTLFSVLYEVYSSSAGPTVRHKCLQ
TLLRMIYYASSDLLKEVLRNQPVSSHIAAMMASPDLKVVVGAIQMADILMKKLEDIFGIY
FRREGVMHQIKFLSEMDLQSPSTTSKSISTSSSHSLSSNSSGGSTSGSGSGSIGGDTIEK
KETEITTISPGATAQPDESPQMRLSDVLKRKRPPKRGPTRKGNKSDDVMETGARGGPVLS
GRTSSRGKSSSKDSKSSSGPKATFLTSLNPRSWGRLGGSSSSSDRPPLPKDTSVQKISYN
TSSANREKVRAWIKEQATKFLEKYFSTEAPGGSHPALNVLNRLCTATEQLSLDNDESLSA
LKEISSIMKESDVSPFEIIHSGLVKKLLMYLTSTSGSVPRDLRIRLFLHVFLGCPLPEVT
YIKERIEDQQGQLYPLVSKMMGCLHQLEQFQVKVHDLPGGNSSSGRGSNALKFFSTHQLK
CQLQRHPSCSSLRQWKGGPVKIDPLALVQAIERYLVMRGYGRTKDGEEEISDEENSDDDV
EDTMAAVFISQGTARHRLEFLIGDRVLPYNMTVYQAIKQFSLSGEGSETDTDSENPLSHA
GIWVQTHTIWYRQAAEQEEVTATSPKKTKAESKGAKAARRKHDDLHKDSHCSVIVPLLNA
FLTDKLPAFVTVQDPSLDVIALLRVLHSLNRLWATLFEVSFFPSPVLPASDFTSNKLTAK
ANRQLQDPLIIMTGNLPNWLGEIGTAAPFLFPFDTRQLLFFATSFDRDRAMMRLQQDNSG
DSIQNDSERVAPRLDRRRRMVSRVDLLKQAEKVMEELGNSKALLEIHYENEVGTGLGPTL
EFYALVSRDFQRTDLDMWRGGSCKGGEPVRPRKQDILHASPCGLFPAPLARNTKAASVNK
VKSKYKFLGKFLAKALMDSRMVDLPLSPVFYKWLLGQEHSVTSADLQHIDPVVAKSFRQL
EDIVHQKKRILSDKSHTEESRQLALDSLTLDGCSIEDLDLTFTLPGYTNIELKKGGKDVP
VTLDNLEDYLQLEQLFCGSGSELWDMKMLMECCRPDHGYTHDSRAVKFLFQVLSAYTPEQ
RDFLQFVTGSPKLPVGGFRSLSPPLTIVRKSFESNECPDNFLPSVMTCVNYLKLPDYSTV
ENMRDRLSVAAREGQLSFHLS
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagggggggacaggtcagcgagaatctgacggcgctcaaggagccacgcccaca
ggggctgcaacaccggggtccggtggaccgaccaacatgacatcggagagcgagtcagat
gacacggacatgggtcggcttcaagctctgcttgaagcccggggcctgccatctcacctg
tttggggcactaggaccacgtatgcatcaactactccacagaaccatgagtgggggaacc
atgagcaaggtccagcagctgcttcagggtctccaggcctcgggtgatgagggccagcaa
ctcactgctgtcatggaaatgtgtcagttgctggtaatggggaatgaagacagcctggca
ggttatccagtgaagcaggtggtgccggccctcatcacactcctgcagatggaacacaat
tttgacatcatgaaccatgcatgtcgggctctcacctacatgatggaggctctgccccgg
tcttcagcagttgttgtggatgctgtgcctgtcttcttggaaaagctgcaagtcattcag
tgtatggatgtagccgaacaggctctcacagctctagagatgctgtctcggagacacagc
aagtcaatcctgcaagctggaggaattgccgcatgtctgatgtttatagacttcttcagt
atctctgctcagcgcagtgccttgactgtcactgccaactgtgtccagagtttatcctca
gaagagttccactacgtcagggactcactgcctctactgagtgggcgactcagccaccag
gacaagaaatcagtggagagtgtgtgtctgtgcttctctcgacttgtggacaacttccag
agtgaccagagattgttgaaggagatagctgtgcatggcctgctctccaacatacaacag
ctgctggtggtgagccccccagtcatcagcacaggcacatttgtgatggtcatacggatg
ttgggggtcatgtgtgccagctgtcctgatctggcggttgtactgctcaaacaaaaaata
gcagagaccctttgttacttgttaataggagcctctgagcaacccgagaagaatatagag
cttgtttcccgaactccccaggaattatatgagatagtttgtttgacaggagagttgtta
ccgaagttgccaaatgatggcatttttgccattgattcgatgttacggaaaggcaggtgt
gtaaatacagattctgtgatatggcaatggcaggatgacagggcaatgtggcggccatac
aacactattgacagcaagatagttgaggctgcatatcaagctggtgaagatgaggtcagt
ctttccacaatgggccggtcctacgcagttgactttaactcaatgcaacaaatcaacgaa
gacactggtacagcacgtcctgtacaacgcaaactgaatcccctggccccagcatcacag
cagagctcatcagccacatctgtgtcatcggaccccaacttagaaagatgtgattcccgc
gctgagatcttgaaggaggacagtgatctggctacagccttcattcagacactcttctct
gtgttgtacgaggtctacagctcatcagctggccctactgtgagacacaagtgtctgcag
acactgctgcgaatgatctactacgcatcgtctgacctgctcaaagaagtgttgaggaac
cagccagtgtcaagccacatagctgcaatgatggcgtccccagatctcaaggtcgtcgta
ggagcgatacagatggcagatatactgatgaagaaactggaggatatctttggcatatat
ttcagaagagaaggtgtcatgcaccagatcaagtttctgtctgagatggacctgcagtcc
ccctctaccacctccaagtccatctccacctcctcctctcacagcctctccagcaacagc
agcgggggcagtacctcgggctcagggtcagggagcatcggcggggacaccattgagaag
aaggagacagaaatcaccaccatctcaccaggagcaacagctcagcctgatgagtcccct
cagatgcgtttaagtgatgttctcaaaaggaaacgacctccaaaacgaggtccaaccaga
aaaggcaacaaatcagatgatgtaatggaaactggtgctcgtggtggaccggtcctaagc
ggtagaacttccagtcgggggaaatcttcaagcaaagacagtaaatctagttctggtcca
aaggcaactttcttgacaagtttgaatccaaggagttggggtcgtcttggtggttcctcc
agttcttctgataggccacctctaccaaaggacacatctgtacagaagatatcttacaac
acatcatcagcaaacagggagaaagtcagagcatggatcaaagagcaggctaccaaattc
ctagagaaatatttctcaactgaagctcctggtgggagtcacccagccctcaatgttctc
aacaggttgtgcacagccactgaacaactctctctagataatgatgaaagcctgtcagca
ctaaaggagatttccagtattatgaaggagagtgatgtctcaccttttgagatcatccat
agtggccttgtaaagaagctattgatgtacctcacatccacgtcaggctccgtcccccgg
gacctccgcatcaggctgtttcttcacgtcttcctaggatgccctctccccgaggtgacc
tacatcaaggagagaatagaggatcagcagggacagttgtacccacttgtcagcaagatg
atggggtgtcttcatcagttagaacagttccaggttaaagtgcatgatctaccaggaggc
aacagttcaagtgggcggggatcaaatgcactcaagttcttcagtacacatcagttaaaa
tgccagttacaaagacatccctcttgttcatctctgcggcaatggaagggtggtccagtg
aaaatcgatcctctagctcttgtgcaggcaatagagaggtatcttgtcatgagaggctac
gggagaaccaaggatggagaagaggagataagtgatgaagagaactcagatgatgatgta
gaggacactatggcggcagtgttcatcagtcagggtacagcacggcaccgactggagttc
ctgattggagaccgtgtcctgccctacaacatgacagtgtaccaggcaatcaaacagttc
agccttagtggggaggggagtgagactgacacagactcggagaaccctctcagccatgct
ggtatctgggtacagacccacacaatatggtaccgacaggctgctgaacaggaagaggtc
accgctactagtccaaagaaaacaaaagctgagtctaaaggtgctaaagctgcccgaagg
aaacacgatgatctgcataaagatagccattgttctgtgatagttcccctcttgaatgcc
ttcctcactgacaagctgcctgcgtttgtcacagtccaggacccgtctctcgatgttatt
gctctgttgcgggtgttgcattctctcaacaggctctgggcaactctctttgaagtgtcc
ttcttcccatccccggtgctaccagcatcagacttcaccagcaataaactgacagcgaag
gccaaccgccagctccaggatcctctcattattatgacaggcaacctccccaactggctg
ggggaaataggcactgcagcgccatttttgttcccctttgatacacgacaactgctgttc
ttcgctacatcatttgaccgagatcgggccatgatgcgtctacagcaggacaactctggt
gacagtatacagaatgacagtgagagagtggcaccacgcctggatcgcaggagaagaatg
gttagtcgtgttgacttgctcaaacaggctgaaaaagtcatggaggaactaggaaactcc
aaagctctattggaaatacattatgagaatgaggtgggtacaggcctgggccctacatta
gaattctatgctctggtgtcccgggacttccaaaggaccgacctagacatgtggaggggg
ggaagctgtaaaggcggcgaacccgtcagacccagaaaacaagatatcctacatgcctca
ccttgtggcttgttcccggcccctctggccagaaacaccaaagctgcatctgtcaacaaa
gtcaaatcaaagtacaagttcctagggaaattcctggccaaagctctcatggattcaaga
atggttgatcttccactgagtccagtattctacaagtggttgttggggcaggaacacagc
gtgacatcagctgacctgcaacacatagacccagttgttgctaaatctttccgccaactt
gaagatattgtgcaccagaagaagagaattttaagtgacaagtcacataccgaagagtct
cgtcaactagccctggacagtctgaccctggatgggtgtagtatagaggacctggacctc
accttcacactaccaggctacacaaacattgagctgaaaaaggggggcaaggatgtgcca
gtcacactcgacaatcttgaggactacttacagctggagcagttgttctgtggtagcggg
agtgagctgtgggacatgaagatgctgatggaatgctgccgccctgaccacggctataca
catgacagtcgggcagtcaagttcctcttccaggtgctcagtgcttacacccccgagcag
agagacttccttcagtttgttacaggctcaccgaaactacctgtaggaggattccgaagt
ctttccccacctctgaccatagtgagaaaatccttcgagtccaatgaatgcccggacaat
ttcctaccatctgtgatgacatgtgtcaactacctgaagctcccggactactccacagtg
gagaacatgcgagacaggttgagtgttgctgccagagaaggacagctctccttccattta
tcatga
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