Haliotis rubra (blacklip abalone): 124273617
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Entry
124273617 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: partitioning defective 3 homolog
KO
K04237
partitioning defective protein 3
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj04144
Endocytosis
hrj04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124273617
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124273617
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hrj01009
]
124273617
Protein phosphatases and associated proteins [BR:
hrj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124273617
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Par3_HAL_N_term
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
124273617
NCBI-ProteinID:
XP_046564857
LinkDB
All DBs
Position
Unknown
AA seq
1453 aa
AA seq
DB search
MKVTVCFEEVRVIVPCGDGEILVRELIDKAITRYKKATGKSNNHWVSVHNVKAISGGGIL
DPDDQLNDVVDDREQLIADFEEQGRPGLHHNGGDGASASSTGTASPDIFQTGDLSNAIHR
PFPISLQNGKTDVIVTPRDLSLGTSLTVRRGSEPALNLLTDDGPLENGDTNIIPGRGRKE
SHQESDEPRSESESDDERVISRPKDPNEKSPLSRFQRDSKRQSLSNNPDMYRWLEAHDNQ
QDRLKQQVVVERKGPIGGSGTEADVKPPHKDSDGAIIIVLKNDGGPLGIHVIPDIDDDGR
ELGLVLQGIEKGGRIERDGRLRVNDRIIEINGRNLEGVTFDDAQKIFRDAMRTAEVRLKV
VKHRPLLPKQPPPLMPKPKGHAPVKPSPLTLPPPKGDNSLPSSPEKTSSPLEVGKPLINN
NNVNEKNVNLGIVNNNQGNKMPGSPLPPRDKLPIQPGPPLKVASPTKKTPPAVPQRHPST
TLSAPKEQAINTLTNTRKIGRKIQIQLQKGALGLGFSITSRDNPTGESPIYIKNILVKGA
AVQDGRLKPGDRLLEVNGMEMTGKSQSEAVGQLRSIPEGHVCNLVVSRQEVVDELFRMPR
ELSDENTPPPVLQPGEVSGEEATVTNIRNKEVIKFEIPLNDTGSAGLGVSVKGKTTSTAE
GTKDLGIFIKSVMHGGAASKDGRLFVNDQLLEVHGIPLTNMSNVKAMDQLRRAMQVDGPM
CGFILLTVARKIGAPSPFLSSENSLDTTDGSQFEVLNHGVTIYGEKNHSRSSSGDNTLFL
RGENSGQTRGDNSARTRADVSGNGQPNGVSRTMPSSLAVDRLMTGDGGNGLRNESYNRAT
HESFEMTPESSPTKPSQLGKVAGPMRDDVIIENDMYAIPRKRQPPPRPHSTLGIPHISPA
HSRSSSMEDYNDDQHHRQQQHQRGSASDWSSKLQEHDELSPTGDFEFQREGFGRQSMSEK
RKGHIDPRGSGSISESRKQEIPKRNFRLGEFSLFMCQVNTIAPFPQAQTRQSNLKRSSSF
EDLASDNVPQMEVEEIPAWRFARIGRPRACNDSFRAAVDRSYDAPTPDHNVMDTLEEESM
ESGSLNQTQSNSARSSFSSENTNEDFHSLRKKKHKDKKGGGILKGLIRLSKGRKSNEENV
RRSRSAERPSDSDVRARQLEQERLVLAQQEQDRPKERQQMEILEQQKQQQLEQQKQQQLK
QQLKQQQLIDQQQKLMQENRPMFYDPQYIQEGFSQPADRGMGRADQRGGQSRAEKIQQLR
VHHQQQHRDRHGQYPHEDAEEFYERQIQEEERKRIMERERELAGRLRPPSRTEMERVAHV
RMGSHDSASNFHQYPSVSDTSSYSDQSQHSHFSHNNYPHQRDRPQSRGVGQYPDPPHPDR
PSSRGPQQYADEWYQTQPDFTNVNRQTAFTRLNPKNGAQFYGDPARAYRDPKYPAIAGRR
PVQTITDPSSAKV
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgacagtttgttttgaagaagtgcgggtgatcgtaccgtgtggcgatggcgag
atcttggttcgagaactcattgataaagctattaccagatataaaaaggcaacgggaaag
agcaacaaccactgggtgtcagtccacaatgtcaaggccatcagtggaggaggtatcctt
gaccccgatgaccagctgaatgatgtggtggacgacagggagcagttgatagccgacttt
gaggaacaaggacgccctggactgcaccacaatggtggtgatggcgcctctgcctcctcc
actgggaccgccagtcctgatatcttccagacaggggacctttccaacgccatacacaga
ccgtttcctatctcactacagaatggcaagacagatgtgatcgtaacacccagggattta
tctctaggtacatccttgacagtacggcggggcagtgaaccagctctcaacctactgacc
gatgatggcccacttgaaaacggagacacaaatatcatccctggtcgtggaaggaaggaa
tcccaccaggagagtgatgaacctagatccgagtccgagtcagacgatgaacgggtcatt
tcacggccaaaggatcccaatgagaagagtccactgtcacggtttcagcgtgactccaag
cgtcagtctctcagcaacaaccccgacatgtacagatggctggaagcccacgacaaccaa
caggaccgtctcaaacagcaggtggttgtggagaggaaaggcccgatagggggcagtggt
actgaagctgatgtcaaacctccgcacaaagacagtgatggtgctattattattgtgctg
aagaatgacgggggacctctcggaatacacgtcatccctgacatcgatgatgatggaaga
gagctggggctggttctacagggtatagagaagggaggtcgtatcgagagagatgggaga
ctacgggtgaatgacagaattattgagatcaatggcagaaacctggaaggggtcaccttc
gacgatgcccaaaaaatatttcgtgacgctatgagaacagcagaagtaagactgaaggtt
gtaaaacaccgacccctactgccaaaacaacccccaccccttatgccaaaacccaaaggt
catgcaccagtgaaaccttcacctttgacccttcccccacccaagggagataactctctt
ccgtcaagtccagaaaagacaagttctcccttggaggtgggaaagcctttgataaataat
aacaatgtaaatgagaagaatgtgaacctcggtatagtgaacaataatcaaggcaataag
atgccgggatcccctcttccgccacgtgacaaactgccaatccaacccggtccgccgctg
aaggtggcgtcacccacgaagaaaacaccaccagctgtgcctcaacgccatccatccacg
actttgtcagcaccaaaggaacaagcaatcaacactctcacaaatactcgcaaaatcgga
agaaaaatccagattcaattgcagaaaggtgctctagggcttgggttcagcatcacgtct
cgagacaaccccacgggagagagtcccatctacatcaagaacatcctcgtcaaaggtgct
gcggtacaggatggaagactcaaacctggggacaggttgttggaggtgaacggaatggag
atgacaggcaagtctcagagtgaggctgtgggtcagctgcgtagtatcccagaaggccat
gtgtgcaatctggttgtgtccagacaggaagttgtggacgagctgtttcggatgcctcga
gagctgagcgatgaaaacacaccaccccctgtcttgcagcccggggaagtttcgggggag
gaggccaccgtcactaacatcagaaacaaggaagtgatcaaattcgaaatcccgctcaac
gacactgggtcagctgggcttggagtcagcgtcaaaggaaagacgacatcaacagcagaa
gggaccaaagatttagggattttcattaaatctgtcatgcatggtggtgccgcgtccaag
gatggtcgtctgttcgtcaatgaccagcttctagaggttcacggcatcccactgacaaac
atgtccaatgtcaaggccatggatcagcttcgacgtgccatgcaagttgacggacccatg
tgtggattcattttgttgacagttgctaggaaaataggtgctccttccccgtttctatcg
agtgaaaattcactggacacaacagatggaagtcaatttgaagtgcttaatcatggggtg
accatatacggggagaagaatcatagtcgctcctctagtggggacaataccctcttttta
aggggagagaattctggtcaaacaaggggagataattctgccagaacaagggctgatgtc
agtgggaatggacagccaaatggtgtaagtaggactatgccttctagtttggctgtggat
agactgatgactggcgatggtggaaatgggttacgcaacgagtcctacaaccgagcaaca
catgaaagtttcgagatgacgcctgagagttccccaactaagccgtcacagctgggtaaa
gtggctggaccgatgcgggatgatgtcattattgagaatgatatgtatgccataccaaga
aagcgtcagccacctccacggccccattccacactggggatcccccacatctcccccgcc
cactcgcgcagctccagcatggaggactacaacgacgaccagcatcaccgccaacagcaa
caccaacgtgggtcagccagcgactggagcagcaagctgcaggaacatgatgaactgagc
cccacaggagactttgagttccaacgggaaggatttgggcgccagagtatgtcggagaaa
cggaaaggtcacattgaccctcgtggtagcggttctatcagcgagtcaaggaaacaagag
ataccaaagagaaatttcaggctcggagagttcagtcttttcatgtgtcaggtcaacaca
atcgccccctttcctcaagcccagactcggcagtcaaacctcaaacgttcgtcctctttc
gaagacctggcctctgataacgtcccacagatggaggtagaggagataccagcatggcgg
tttgctcgcattggtcgcccccgtgcctgcaacgatagtttccgggctgcagttgatcgg
tcctacgatgccccaacgccggatcataacgttatggatactttggaggaagagagcatg
gagagcggttcccttaatcagacacaatcaaactcggccaggtcttccttcagtagcgag
aacaccaacgaagacttccacagtctcaggaaaaagaagcacaaagacaagaaaggcggg
ggtatcctcaaggggcttatcaggctgagtaaaggacgcaaatcaaacgaggagaatgtt
cggaggtcaagatcagcggaacgaccttctgacagcgatgtccgagcccgacagctggag
caagagaggcttgtgctggcacaacaagaacaggacaggccaaaagaacgtcagcagatg
gagatacttgagcaacaaaaacaacagcagctggaacaacaaaaacagcagcaactgaaa
caacagctgaaacaacagcagctgatagaccagcagcaaaagctgatgcaggagaaccga
ccaatgttttatgaccctcagtatattcaggaggggttttcccaacccgcagatcgggga
atgggcagagcagatcagcgagggggacagagtagggcagagaaaatacaacagcttagg
gtccatcatcagcaacaacaccgggatcgtcatgggcagtacccacacgaggacgcagaa
gagttctatgagagacagattcaagaagaagaaagaaagaggataatggaaagagagagg
gagcttgccggacgactgaggccaccgagtcggacagagatggagagagttgcgcatgtt
cgaatgggatcccacgacagtgcctccaacttccatcagtatcccagcgtcagtgacacc
agcagctactccgatcagagtcagcactcacacttctcacacaacaactacccccaccag
agggaccgtccgcagtctcggggggtggggcagtatcctgacccccctcaccccgatcgg
ccctcatcacgtggacctcaacagtatgcagatgagtggtaccaaacgcagccagacttt
accaatgtcaacagacagacagccttcacaagacttaatccgaaaaacggggcccaattt
tatggagaccctgccagagcatatagagaccccaaatatcccgccatagcgggtcgaagg
ccagtacagacaataacagacccaagttcggcaaaagtgtga
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integrated database retrieval system
