Haliotis rubra (blacklip abalone): 124275089
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Entry
124275089 CDS
T07967
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124275089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrj03041
]
124275089
Spliceosome [BR:
hrj03041
]
Complex B
Other components
Prp19-related factors
124275089
Complex C
124275089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
RRM_YTH1
zf_CCCH_4
RRM_occluded
zf-CCCH_2
zf-CCCH
Nup35_RRM_2
zf-CCCH_4
RRM_3
zf-CCCH_10
RRM_PARP14_3
O-antigen_lig
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
124275089
NCBI-ProteinID:
XP_046566532
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MATSKGANTYNRQNWEDAEFPILCQTCLGDNPYIRMTKEKYGKECKICARPFTVFRWCPG
ARMRFKKTEVCQTCSKIKNVCQTCLLDLEYGLPVQVRDAALKAYDNMPKSDVNKEYYTQN
MEREIANSDGTSPVGALAGKAQAASDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEEC
PYRHEKPTDPDDPLADQNIKDRFYGMNDPVADKLMNRYSNMPKLEPPEDKTITTLYVGNL
GDKVTEQDLRDHFYQFGEIRSVNVVSKQQCAFVQFTERPSSETAAERSFNKLIINGRRLN
IKWGRSQGQQQLTGKKEEDGQMLEPVPGLPGALPPQPEELGNNFFNLQGPPPALPPLPPR
GMMPRGPPPMPPFGIMPRGPPPMGMRMPPPPPGIMPIRPPPGVHMRHMVHYPSQDPTRMG
AVSSGKQPQQQQQPPPQQQQQQT
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccaagggagcaaatacgtacaatcgtcaaaattgggaagatgctgaattt
ccaatcttatgtcaaacatgtcttggggacaatccatatattcgaatgaccaaagaaaag
tatggcaaggaatgtaagatctgtgcccgacctttcaccgtgtttcgatggtgtcctggt
gctcgtatgcgtttcaagaagacagaagtctgtcagacctgtagcaaaataaagaatgtc
tgccagacatgtctcctggacttggaatatggtcttcccgtccaggttagagatgcagct
cttaaagcttatgacaacatgcccaagtcggacgtcaacaaggaatactacacacagaat
atggaacgagaaattgccaacagtgatggcaccagcccagtgggggcacttgcagggaag
gcccaggcggcaagcgacatgctgctgaagctggccaggaccacgccatactacaagagg
aataggccacacatctgctcattctgggtcaagggggagtgcaagagaggagaggagtgt
ccataccgtcatgagaaacccactgatcccgatgatcctctggctgatcagaacattaag
gaccggttctacggcatgaacgaccctgtggcagacaagctgatgaacagatactccaac
atgccaaaactggaacctccggaggacaagactatcacaaccttgtatgtgggtaacctt
ggcgacaaggtgacggagcaggatctcagagatcacttctaccagttcggtgagattagg
tctgtgaatgttgtctcaaaacagcagtgtgcatttgtccagtttacggaaaggccatca
tcagagactgcagctgagaggtcatttaataagctcatcatcaatggccgtcggctgaac
attaagtggggtcggtcacagggccagcaacagctgaccggcaagaaggaggaagatggt
cagatgctggagccagtgcctggtcttccaggagcactaccaccccaacccgaggaactg
ggcaacaacttcttcaacctccagggccctcccccagctttgccgccccttccacccagg
gggatgatgccccgtgggcccccacctatgcctccgtttggcatcatgccaagagggcca
ccacctatgggtatgcgcatgcctccccctcctccgggcatcatgcccatcaggcctccc
cctggggtacacatgaggcatatggtgcactatccatcacaagaccccacacggatgggg
gcagtgtcgtcagggaaacagccacagcagcagcagcagcccccaccacagcaacaacaa
caacagacttag
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integrated database retrieval system
