Haliotis rubra (blacklip abalone): 124275296
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Entry
124275296 CDS
T07967
Name
(RefSeq) DNA excision repair protein ERCC-8-like
KO
K10570
DNA excision repair protein ERCC-8
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03420
Nucleotide excision repair
hrj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124275296
09124 Replication and repair
03420 Nucleotide excision repair
124275296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrj04121
]
124275296
03400 DNA repair and recombination proteins [BR:
hrj03400
]
124275296
Ubiquitin system [BR:
hrj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124275296
DNA repair and recombination proteins [BR:
hrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
124275296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_EIPR1
Beta-prop_RIG_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_Nup120_160
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_DCAF12
Beta-prop_LRRK2
eIF2A
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
124275296
NCBI-ProteinID:
XP_046566734
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MLRLFTDREYGINNPLILSRAETTRRIFSLELSKHRDVDRVQSGGINSMDIDLIESRYLL
SGSSTGGISVHDLENFSGNVKHSYKYVCGVDRSNRYMHKHSIQTVQWYPLDTGIFTSSGT
DKLLKVWDTNRLVPADTFEFSTIVYSHHMSPIATKHNLLAVGCQGSTVKLVDLKAGSATH
MLKGHKSCVMSVKWSTRDEFILATGSADNRVLLWDVRTAKGHLMSLDQHNGEAASSVASS
TTAHGGRVNGLSFTHDGLFLVTFGTDNRLRLWNTYTGKNCMVNYGSIENDSKKNVQIGLS
QGGCPDVIFVPSDGNIDILDLHKGGYINTLRGHYNVVNCCLFNTNSHELFSGGSDRNILV
WVPNTDSAYDDHLKEDSKSKQDPSFVKRIAATADSWSSDEDE
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgctgagactatttacggacagagaatacggcattaacaaccctctgatattatccaga
gctgaaacaactagaagaatatttagtttggaacttagtaaacacagagatgtcgacaga
gtccaaagtggtggcattaacagcatggacattgacttaattgaatcaagatacttgtta
tcaggaagctccactggaggaatatctgttcatgatctggagaatttcagtgggaatgtg
aagcactcctataagtatgtttgtggagtggacaggtccaatagatacatgcacaaacac
agcatccagactgttcagtggtacccgttggacacgggcatcttcacctccagtggaact
gataaactattgaaagtgtgggacactaacaggcttgtgcctgcagatacgtttgagttc
agcactattgtatacagtcatcacatgtctcccatcgccaccaaacacaacctgcttgct
gttggctgtcaaggttcaacggtgaagctggtagatctgaaagctgggtcggcaacccat
atgctcaaaggacacaagtcttgtgttatgtcagtcaagtggtctacaagggatgagttt
attttggcaacaggcagtgctgacaatcgggtcctgctgtgggatgtacgtacagccaaa
gggcacctgatgtctctagatcaacacaatggagaagcagcgtcttcagttgccagctcc
acaacagcccacggtggacgagtgaatggcctgagttttacccatgatggcttgtttctg
gtgacattcggcacagacaataggctgcgtttgtggaacacatatactggaaaaaactgc
atggtgaattacggctcaatagaaaatgacagtaagaaaaacgtccagattggtctgtcc
caaggtggctgcccggatgtgatatttgtgccaagtgatggtaacattgacatcttagat
cttcataaaggcggctacatcaacacattgcgagggcattataacgttgtgaactgttgt
ctgtttaacactaacagccatgaactgttcagcggaggaagtgaccgcaatattctggtg
tgggttcccaacacagacagtgcatatgatgatcatctcaaggaggactctaagagcaaa
caagatccaagttttgtgaagagaatagcagccacagctgactcctggagtagtgatgaa
gatgaatga
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integrated database retrieval system
