Haliotis rubra (blacklip abalone): 124275605
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Entry
124275605 CDS
T07967
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hrj04054
]
124275605
Enzymes [BR:
hrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124275605
Pattern recognition receptors [BR:
hrj04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
124275605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
DEAD
RIG-I_C-RD
CARD_2
Helicase_C
RIG-I_C
CARD
SWI2_SNF2
LIM
Yippee-Mis18
SLFN-g3_helicase
AAA_22
PhoH
Motif
Other DBs
NCBI-GeneID:
124275605
NCBI-ProteinID:
XP_046567165
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MATSDQGRDTLGYQTELIQMCRETFERCLVPSTVMDNMNVDPNLKERILAHQRRERQEAV
KLLLEAVLAKPEDHVSMFIYALTEVGFEHFTDILEDSKGPQDRNRTSAKYEMLILWLQGD
LKDKIIPTEIIDGLKPILSDRDYELIRNLETERSAHDACQELFLAMPRKTPRWASYFLDA
LYNAYGPQLLAKIHPDLPRDVGVDEDEDSDDGEDGSDTDSQSETGCVSSVTSFPDLDSRE
ENDQPNRQVDLQGKPEGQVDTQHFSEHRVDPRGHPELLVDSKGHPGRLVDSHGNPDRQVD
TQGHMERQFDPQVHPERQVDTQVHPERQVDTQGHPEHQVDSQSHRGVARYSRDQLLALRP
RSALPHIISADISLDCFLDMDTPRHHRELISTPIPELREAGVEEQTLRKRIQPPSQSCTV
SNSDSSDDAGSQDGDPERTVIYSREDIEMREYQLELAASALTGRNNIIWPPTGSGKTVVA
IHIAKGILEKERRKVIFLEPTVALVNQTYHEVRRYLGDEYKVMKLRGVDDDSVNLHILLP
YNDIAVMTPMILENHLKQEKIECLSSLCCLLVLDECHHTRKGEAYNQIMIRYLREKEGGA
QHLPQIVGLTAAIGVEKASTDEEALDNILRLCANLDPHSPIISTVQRNRKELDRLVPFAE
ELTIPLKENKNSQSKKVIEDAMARIQGILPRFQDMHNEVIGKCLREAPADFGSQSYNNWT
VDLKDTTTKVNTQGDTELTEMIRDLSSIADHLNKYNVALTLNDLVRVKDVIDYVRNELLS
THGGSLQTAGEQQLQNEANRVKKDLMRCELMRTQDRDNENPRLNQLADILVDLMGDVPDF
RAIIFAQTRATCGALADWLNNDVHVPDVLKDLNASYFTGAHASEQIGGMTQTQQDNVLAR
FRSGRIKLIVATSIGNEGIDIPDCNVIVPYNHTGNEITTLQVRGRSRKVGGRTVNLADDK
VQERNCRNLVKEYLMKQAVDTITRMPYDRVSKLIRLFQQEVLAAAEISERERQADARQAT
HVQYCVICKHCRTELTTGDLMRVINGSQYVVVDKTFTSKINSHVPRQINDQLKFDDVIMA
GGISCMKCHKPLGSRILVSGVVFYTLGIKHVLFLIDGTQEPQKFKQWSKVPFKPRPMSTA
DQQEYSRP
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggccaccagcgaccagggaagggacactctagggtatcagacggaactgattcagatg
tgtagggaaacctttgagagatgtctcgtcccatctacagtcatggataacatgaacgtc
gaccctaacctcaaggaaaggattctagcccaccagcgccgagagcgacaggaggcagtc
aaactgctgttggaggctgttctggccaaaccggaagaccatgtctccatgtttatatat
gccctcacggaagtaggttttgaacacttcacggacatacttgaagacagcaaaggccct
caagacagaaacagaacttcagccaaatatgaaatgttgattctctggctgcagggcgat
ctaaaggacaagatcattccgacagagatcattgatggcctgaagccaatactcagtgac
agggactacgagctgattcgcaacttggagactgaacgaagtgcccacgatgcctgtcag
gagctgttcctggccatgccgaggaaaaccccccgctgggcctcctacttcctggatgct
ctgtacaacgcctatggcccccagttactggcgaaaatacaccccgacttgccccgtgat
gtaggcgttgacgaggatgaggacagtgatgacggggaggatgggagtgacaccgactcc
cagtcagagacgggctgtgtatcgtcagtgacctcctttccggatctagactctcgggaa
gaaaacgaccagccgaatcgtcaggtcgacctccagggaaaaccggaaggtcaggtcgac
acccagcacttctcggagcatcgggtcgatccccggggccacccggaacttctggtcgac
tccaagggccatccagggcgtctggtcgactcccatggcaacccggatcgtcaggtcgac
acccagggccacatggagcgtcagttcgatccccaggtccacccggagcgtcaggtcgac
acccaggtccacccggagcgtcaggtcgacacccagggccatccggagcatcaggtcgac
tcccagagccacaggggagtcgccaggtacagccgagaccaactgttagcccttcgtcca
cgatcagcactaccacacatcatcagcgcagatatttcactggactgtttcctggacatg
gacacgccacgtcatcacagagaactgatttcaacacccatcccggaactgagagaggct
ggtgtggaggaacagacactgagaaaaaggatacagccaccgtcacaaagctgcacggtt
tcaaacagcgactcatctgatgacgcaggaagccaggatggagacccagagagaactgtc
atttactcccgtgaggacattgagatgcgggagtaccagctggagcttgctgccagtgcc
ttaactggtcgcaacaacatcatctggcctccgaccggatcagggaaaactgtggttgcc
atccacatcgctaaaggcatccttgagaaagaaagaaggaaagttatatttcttgagcca
acagtagcgcttgttaatcagacttatcatgaggtcagacgttacctcggtgacgaatac
aaggtgatgaaactgaggggcgtcgatgacgacagcgttaatctccacatcctcttgcca
tataacgacatcgcagtgatgaccccgatgatcttggagaaccacttgaagcaggagaag
atcgagtgtctgtccagcctgtgttgtctgctcgtcctagacgagtgtcatcacacccgg
aagggggaggcctacaaccagatcatgatcagatatctgcgggagaaggaaggaggagct
caacacctgcctcagattgttggattgaccgccgcgattggggtagagaaagcatcaaca
gatgaagaggccctcgacaacatcctgagactgtgcgccaacctggaccctcactcaccc
ataatctctacggtgcagcggaacaggaaggaactagaccgtctcgttccttttgcagaa
gaacttaccatacctctaaaggaaaacaagaacagtcagtccaagaaggtcatagaagat
gcaatggctcggattcagggcatactaccaaggttccaggacatgcacaacgaggtaatt
gggaaatgtttgcgggaagcgcctgcagactttggtagccagtcgtacaataactggaca
gtggatctcaaggacaccaccaccaaggtcaacacgcaaggtgataccgaactgacagag
atgatacgtgatctgtcgagcattgccgaccacctaaataaatacaacgtagccttgact
ttgaatgaccttgttcgggtcaaggacgttatagactatgtccgcaatgaactgctgtcc
acacacggaggaagcctgcaaacagctggcgaacaacaactccagaacgaggccaacagg
gtaaaaaaagacttgatgcggtgtgaactgatgaggacacaagaccgtgacaatgaaaac
ccaagactgaatcagctggctgatattctggtcgacctcatgggagacgtcccagacttc
agggccatcatatttgcccagactcgagccacgtgcggggcccttgctgactggctcaac
aatgacgttcacgtcccagacgttctcaaagacctgaacgctagttatttcaccggagca
catgcgagcgaacagatcggtggcatgacccagacccagcaggataacgtgctggcccgc
ttcaggtcgggcaggatcaagttgattgtggctacctctattggtaacgaaggcattgac
atccctgactgcaacgtgatcgttccctacaaccacaccggcaatgagataacaacgctc
caggttcgaggtcgaagcaggaaggttggcggaagaactgtaaatcttgcagacgacaaa
gttcaagaacgaaattgtcgcaacctggtgaaagaatatttgatgaaacaggcggtcgac
accatcactcgaatgccctatgaccgagtttcaaagctaatcaggttgtttcaacaggaa
gttctagcggcagcggaaatctcagagcgagaaagacaggctgatgcaaggcaggcgaca
catgtgcagtactgtgtcatttgtaaacattgccggacagaactgacaactggtgacttg
atgagagtcatcaatggaagccagtatgtagtggttgacaaaaccttcacatcgaaaata
aatagccatgtgccgagacagataaatgaccagctaaaatttgatgatgtcattatggct
ggcgggatctcgtgcatgaaatgccataaaccacttggaagccgaatcctcgtcagtggc
gtggtgttctacactctgggaataaagcatgttctatttctaatcgatggaactcaggaa
cctcagaagttcaaacagtggtcgaaggtccccttcaaaccgagaccgatgagtacagca
gatcagcaggagtacagcagaccctga
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integrated database retrieval system
