KEGG   Haliotis rubra (blacklip abalone): 124275750
Entry
124275750         CDS       T07967                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
hrj  Haliotis rubra (blacklip abalone)
Pathway
hrj03020  RNA polymerase
hrj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hrj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124275750
  09124 Replication and repair
   03420 Nucleotide excision repair
    124275750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hrj03021]
    124275750
   03019 Messenger RNA biogenesis [BR:hrj03019]
    124275750
   03400 DNA repair and recombination proteins [BR:hrj03400]
    124275750
Transcription machinery [BR:hrj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     124275750
Messenger RNA biogenesis [BR:hrj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     124275750
DNA repair and recombination proteins [BR:hrj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      124275750
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N RNA_pol_Rbc25
Other DBs
NCBI-GeneID: 124275750
NCBI-ProteinID: XP_046567362
LinkDB
Position
Unknown
AA seq 172 aa
MFYHVSLEHEILLHPRYFGPNLLNIVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGMIQ
PSAGFVLYPIKYKAIVFRPFKGEVLDAVVTQVNKVGLFTEIGPLSCFISRHSIPADMEFD
PNSNPPCYKTKDEDIVIQQDDEIRIKIVGTRVDAKDIFAIGTLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttatcacgtttctctagaacatgaaatcttgttacatccaagatattttggtcca
aatcttctcaacattgtaaaacagaaactcttcacagaagtagaaggaacatgtacagga
aaatatggcttcgtcatcgcagtgaccacaatcgacaatataggagctgggatgatccag
cccagtgcaggatttgtcctgtaccccattaagtacaaagctattgtgttccgtcccttc
aagggggaagtgttggatgctgttgtaacacaggtcaacaaggttgggctcttcacagaa
attggccccctctcctgcttcatctccagacattctattcccgcagacatggagtttgac
cccaattcaaatcctccatgctacaagacaaaagatgaggatattgtgatccagcaagat
gatgaaatcagaatcaagattgtgggcacaagagttgatgcaaaggacatttttgcaatt
ggaactctgatggatgattacttaggtctggtgagctga

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