Haliotis rubra (blacklip abalone): 124275908
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Entry
124275908 CDS
T07967
Name
(RefSeq) exosome complex component RRP4-like
KO
K03679
exosome complex component RRP4
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124275908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124275908
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124275908
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
124275908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
DUF6837
Motif
Other DBs
NCBI-GeneID:
124275908
NCBI-ProteinID:
XP_046567551
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MATVDIRLASARVRQKTGDVEEINNLVTPGDVITTDTGFMRGHGTYMEDEKLHSSVAGVV
ERVNKLICVKPLKTRYNGEVGDVVIGRILEVCQRRWKVETHSKLDSVLMLSSVNLPGGEL
RRRSEEDEKLMRHYLKEGDLISAEVQNVMGDGCLSLHTRSLKYGKLGQGTLLQISPSLVK
RRKTHFHNLPCGASIILGNNGFIWISPTANEDSDDTGGYEQNLEPVPRADREVIARLRNC
VLALADHQVMMYDTTILYVYEASENYAVSEMLKPEVSAELIDLVRQRLEMEGT
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgttgatattcgactggcaagtgcacgtgttcgacagaagacgggtgacgtc
gaggagatcaacaatcttgtcacgcctggggatgtcatcacaaccgataccggattcatg
cgtggtcatgggacttatatggaggatgagaagctgcattcctcagtggcaggagttgtg
gagcgtgtcaacaaactcatctgtgtgaagcctctcaagacacggtataacggtgaagta
ggggatgtggtgattggtcggatcctagaagtgtgtcagcgacgctggaaggtggaaact
cactccaagctggactctgtcctaatgctgtcttcggtcaacctcccggggggagaactg
cgaagaaggtcggaggaggacgagaagttgatgagacattacctaaaggaaggggacctc
atcagtgcagaggtgcagaacgtcatgggggatggatgcttgtctctacacaccagaagt
ctcaagtacgggaagttaggtcagggtacgctgcttcaaatctccccctcactcgtaaag
aggaggaaaacccattttcacaaccttccgtgtggagcgtccatcatccttggcaacaac
ggtttcatatggatctccccaaccgccaacgaggacagcgacgacaccggcggatatgaa
caaaacctagagccagtcccaagagcagatcgtgaggtgatagcgcgactccgaaactgt
gttctggcgttggccgaccaccaggtgatgatgtacgacaccactattctgtatgtgtac
gaggcctctgagaactatgcagttagtgaaatgttgaagccagaagtatcggcagagtta
attgaccttgttcgtcagaggctggaaatggaaggcacctaa
DBGET
integrated database retrieval system
