Haliotis rubra (blacklip abalone): 124276076
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Entry
124276076 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-9-like
KO
K16498
protocadherin delta 1
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
124276076
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hrj01009
]
124276076
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrj04515
]
124276076
Protein phosphatases and associated proteins [BR:
hrj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124276076
Cell adhesion molecules [BR:
hrj04515
]
Cadherins
Protocadherins
124276076
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
TMEM70
DUF6249
Motif
Other DBs
NCBI-GeneID:
124276076
NCBI-ProteinID:
XP_046567688
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MAMLISALMVLISTTLVSCQNITFEIAEGQEAPVSVGNVASASNLQQQVGETEFRALRYS
IVSQESKVDTFFRVDETSGEIFTTDVLDRESFCEHVSLCLLSLDIAAQSSRSAFFRKITV
SINLKDINDNPPRFGNSEFRYNLSEGASVGTKISLPLATDKDSNEQNLVQHYQLSPSSLT
FALDPVTTDGKISSLSLSLTGEIDRESQDEYAFILKATDGGSPTRTGTLSIIINIIDEND
NEPVFQRGIYEATLPESADIDSTVVQVSAVDIDMDENAKISYFFSIPTQERVLKHFSIEE
STGLISVKSTLNSEGGSIFDFQVKAVDHGNPQLFAEAQVIVAVTDNVNDPPVIDVKLLFA
EDGAAAVPESSTIGRTAVLISVKDSDSGRNGLVACQISGQYFQLQKLEQTEYRVIVARSL
DREGMHVHNVTVTCQDQGTPPLSSSQEFLIRVTDDNDNPPLFSQEKYFKSIDENNAFPVS
LGEVKASDKDFGKNGEIVYKLDTLASLSFNIDESTGEISAIRTFDREAVPKYTFKVFAVD
KGEVPLTGTTTVVVNIGDKNDQRPAFSNVSYVFSVKENSPVGTFVGKVKATDSDVGKGGE
VQYTLRGSPVNGVIPFTVNAKGEISTAAEIDYESMETYNFDILASDLGTPPQITSVPIKI
RILDDNDNHPEINFPVPSNDSISXPHNMEPGTEIAIVQAYDLDSGLNGWLTYSIVTANQT
GLFQISASSGVIRLGRAATDKDVKKYNINISVHDDGTPQRATYAVLNVEIVHADAYTATS
SDTNMKIVIVLVCITAVLAIVVLGTLFTIRYVDNRRKYKDYTDGEKSQYSSSKSSSKRSK
KEFNELKPGIILVTEGNKLTKKTVTFKNDTKDNKSDVFATEESQYNQLRHLSESQNKSNT
ASPAKNNKKSRVPSSSSSIEGEVSVVDILHQHKALVQSLRLKKTPNNAKDGEKDPDVWSD
TSGETIGTDSGHGGSDLDMNNSLKMSV
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgctaatttcagcgctaatggttctgatttcaacgacgctcgtcagttgtcag
aatatcacttttgagatcgcggaaggacaagaagcccccgtgtcggttgggaatgtggcc
agcgcatctaatcttcaacaacaggttggcgagactgagtttcgggccctgaggtacagc
attgtctctcaggaaagcaaggtggataccttcttcagagttgatgaaacatcgggggaa
atattcacaaccgacgtgttggaccgtgaaagtttttgtgaacatgtgtcactgtgtttg
ttgtcgctggatatagcagcgcagtcatctagaagcgcctttttcagaaaaatcacagtc
agcatcaacctgaaagacattaatgataacccaccacgtttcgggaattcagaatttcga
tacaatctgtctgaaggcgcatcagtggggacaaagatttcactcccgcttgcaacagat
aaagactcgaatgaacaaaaccttgtgcagcattatcaactttcacccagttctctgaca
ttcgctcttgatcctgttacaacagatggtaaaatttctagcttgtcattatctttgaca
ggtgaaattgacagagaatctcaagacgagtatgcatttattctgaaagctactgacggt
gggagtcctacaaggacaggtactctctccataattattaacataatcgacgaaaatgac
aatgaacctgttttccagcgcggtatctacgaagccactcttccagagagcgccgatatt
gactccaccgtggtgcaagtgtcagctgtcgacatcgacatggatgaaaacgccaaaata
tcctattttttctcaataccaactcaagaacgcgttttgaagcatttttcgattgaggaa
tctacgggacttattagcgttaaatccactttgaactctgaaggtggttcaatctttgat
ttccaagttaaagcagttgatcacggaaaccctcaactgtttgccgaggctcaagtcatc
gtcgctgtcaccgacaacgttaatgaccctcctgtgattgacgttaagttgttgttcgct
gaagacggtgctgctgccgttccagagtcgtctactattggtagaactgcagtgttgatt
tctgtgaaggattctgattcgggaagaaatggactggttgcttgtcaaatcagtggtcag
tatttccaactccagaaacttgaacaaacggaatatagagtgatagttgctcggtcgtta
gatcgggaaggaatgcacgtgcataacgtgactgtcacgtgtcaggatcagggcacgccc
cctttgtcttccagccaggagttcctgatccgtgttaccgacgataatgacaatcccccg
ctgttttcacaagaaaagtacttcaagagtattgacgaaaacaacgctttcccggtgtcg
ttaggcgaggtcaaagccagcgataaagactttggtaaaaatggtgaaatcgtgtacaaa
cttgatactcttgcttccctgtccttcaatattgacgaatccacaggtgaaatttcggcc
attaggactttcgacagggaggcggttccgaaatatacgtttaaagtgtttgcagttgac
aagggtgaggtaccattgaccggaacgaccaccgttgttgtcaacatcggcgacaagaac
gaccagaggcccgccttctccaacgtatcgtacgtgttctctgtaaaggagaattctccc
gttggtactttcgttggaaaagttaaagcgacagattcagatgttggtaaaggaggtgaa
gtgcaatacacactgcgtggatcgcctgtcaacggtgttatacctttcacagttaatgca
aaaggtgaaatcagcaccgcggctgaaattgactacgaatcgatggaaacatacaatttc
gacattctggcgtccgaccttggcaccccgccacagataacatcagtgccaatcaaaatc
cgtatccttgacgacaatgacaaccatcccgaaatcaatttccctgtgccaagcaacgac
tcaatttccnatccccacaatatggaacccggtactgaaattgcaattgtgcaagcctat
gacctagactctggactcaatggatggctcacgtactcaatcgtcacagctaatcaaacc
ggcttgtttcaaatcagcgccagcagtggtgtcatcagactcggccgtgcagccacggac
aaggatgtgaagaagtacaacatcaacatcagcgttcacgacgacggcaccccccagaga
gccacctacgccgtcctcaacgttgaaatcgttcacgcagacgcttatacagcgacgtcc
agtgacacgaacatgaaaatcgtcattgtcctcgtctgtataacagctgtattagctatt
gtagtccttggaactctattcactattcgatacgtggacaataggcgcaaatacaaagac
tacaccgatggcgagaagagccaatattcctcatccaaatcttcttccaagaggagtaaa
aaggaatttaacgaattaaaacctggtattattctggtcaccgagggtaacaagctcacg
aagaagactgtgacttttaaaaatgacactaaagacaacaaaagtgacgttttcgctacg
gaggaatctcaatacaatcaactgaggcacttgagtgaaagtcagaataaaagcaataca
gcgtcaccagctaaaaataataaaaagtcacgagtgccatcttcctccagctcaatagag
ggggaagttagtgtggtggacatcctccatcaacacaaggcattagtacagtctctccgt
ttaaagaagactcctaataatgcaaaagatggagagaaggacccggatgtttggagtgac
acgtcaggggagacaatcggaactgatagcggccatggcggaagtgaccttgacatgaac
aatagtctcaagatgtccgtttga
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