Haliotis rubra (blacklip abalone): 124276604
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Entry
124276604 CDS
T07967
Name
(RefSeq) protocadherin-11 X-linked-like isoform X1
KO
K16498
protocadherin delta 1
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
124276604
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hrj01009
]
124276604
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrj04515
]
124276604
Protein phosphatases and associated proteins [BR:
hrj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124276604
Cell adhesion molecules [BR:
hrj04515
]
Cadherins
Protocadherins
124276604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Sde0182_C
DUF4594
Sigma_reg_N
SID-1_RNA_chan
DUF4446
DUF3108_like
Motif
Other DBs
NCBI-GeneID:
124276604
NCBI-ProteinID:
XP_046568244
LinkDB
All DBs
Position
Unknown
AA seq
1188 aa
AA seq
DB search
MGFLWCYVLVHVTLMQVVFCEELTLNYPLQEEQNPGTFVGNIARDSKLYTAYSPSDFLLL
RYSLFTQASKVAKKFDIDASSSTIRTTERLDREDECRGKKLCTLSIDVEVYMVKGNSETP
DLKTIIRVNIDLLDINDNAPTFPKNVVTLTVPESVAVNQELLTSGAVDLDTGDNNSVESY
ELIPSDGMFGLKVIENSYGPADLGLVVKQSLDRETRSSFSMAVVAKDGGYPQRSGSVTIN
VVVSDVNDNRPLFVKQEFNVSVPEDTPVHTVILILTATDPDADENGQLAYKFSDRTSESV
KNVFKIDKDSGELSPKRKLDYEEEKEYRFRVEVSDLGNPSRSSQATVTVHIADVDDNAPQ
IIINMPPSSKDISEDTERGTFIAHVSVFDADSGNNGKVSCKIHDDHFVLQKFSDFDYYKI
LLNRSLDYEESPTHTVNITCEDGGVVPRRNSSSFTVKVKDVNDNAPSFISDRINAHIREN
NRYSDIVTILTATDPDGPGNNEVRYSIVSDPRDLVNLDSRSGEVRASKIYDRESMPSFTI
TVKAEDAKDSRLSSTAVLSVFIDDDNDKPPRFTVPYFRFYVSESQHANSVIGKLNATDRD
VDQNFSFSFSKSSNVSQYFTIDAETGIIRNKKRLDREDHLRFDFGVIVRDPNNSQFKDKA
NVTVFIKDWNDNTPIVVFPSDINNTVYVPYHRAVGSIILVVRAFDNDTEDNAKLTYTIEQ
GNDKELFFLNLHSGEMYIAKEMHSSDAGTYKLVVAAHDSGEPQLTSYANLNIILTSSNGT
VQFINDNDAHQYIAIVITLVCVTSVLCVAVIITICIIKKIDKERRQTLKEKMQTQAAYTV
DNVETVDTGVSPNKPYENEIDKLKRKIKRELSFTVDDSHAMDTTAVTGASFATFKNMTSY
SSIDQKTLANPQACSSVLTNNTHTPEHTNLKMAHYAEKKREIHRLASERIQEHDCDTAHW
LSETEVKKADDVTSELSQGAETDSGRGCSEEDSQSNRGSTVPHSDSDDVKSYSPRYQPGR
GTYILSRDTSHDTTRSTNSQLSLRSAMSPRLGEIQGNHYPRNISFSDDSVTANTTVDAKR
KKKLHGDNIPMQTFARSERNASQTPYHLRAMNRVRFTGHTPNQGTFIDITESTPGMRYSI
GDMDDVLCDSAVTMHEDDERTTTSGSYTINAEELCNEIDNLFFKDIIV
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgggttttctgtggtgttatgttttggtccatgtgactttgatgcaagttgtgttttgt
gaggagctgacattgaactatccccttcaagaggagcaaaatccaggtacatttgttgga
aatattgcaagggatagtaagctctatactgcctacagtccttcagatttcttactcttg
agatattctttatttactcaagctagcaaggttgctaaaaagtttgatattgatgcatca
tccagtaccataagaacaactgaacgtttggaccgagaagatgaatgccgaggcaagaag
ttgtgcacactcagcatcgatgtggaagtttacatggtcaaaggcaactcagaaactccc
gatttgaagacaattattcgtgtcaatatcgatttactcgatatcaacgataatgcccca
actttccccaagaatgtggtgacgctgactgtgccagagtctgtggctgtgaatcaagag
ttgcttaccagtggagcagtggacctggacactggtgataacaattccgttgagtcttat
gaactcatcccaagtgatggcatgtttggactcaaagtaattgaaaactcgtatggccca
gcagacttaggacttgtagttaaacagtctctggatcgtgaaactcgaagttctttcagc
atggcagtagttgccaaagatggtggttatccacaaaggtcaggatctgtgactatcaat
gttgtggttagtgatgttaatgacaatcgaccactatttgtgaaacaagagttcaacgtc
agtgttcccgaggatacaccagtgcatacagtcattctaattctgaccgcaactgacccc
gatgctgatgaaaatggccaactagcttacaaattcagcgaccgcactagcgaaagtgtt
aaaaatgtatttaagattgataaagacagtggtgaactctccccgaagagaaagttagat
tatgaagaagaaaaagaatatcgttttagagttgaagtcagtgatcttggaaacccatcg
cgatcttcacaggctacagtcactgttcacatcgcagatgttgatgacaatgccccacaa
attattatcaatatgcccccaagcagcaaggatatctctgaagacacagaacgcggtacc
ttcatagcccacgtatctgtctttgatgctgatagtggtaataatggcaaagtatcgtgc
aaaatccatgacgatcattttgtccttcaaaagttttcagattttgactactacaaaatt
ctgctgaacaggtcactggactatgaagaatccccaacacatactgtaaacatcacatgc
gaagatggtggtgttgtacctcgtagaaattcatcgtcattcactgtgaaggtgaaggac
gttaatgacaatgcaccttctttcataagtgacagaataaatgctcatataagggaaaat
aaccgatacagtgatattgtcaccattttgactgcaactgacccagatggcccaggcaac
aatgaagttcgttattctatcgtgagtgatccaagggacttagtaaacctagattcaaga
tcaggagaggttcgtgcatcaaagatctatgatcgcgaatcaatgccatcatttacaata
actgtgaaggctgaagatgctaaggacagtcgcttgtcatctacagcagttctcagtgtg
ttcattgatgatgacaatgacaaacctccacgattcacagtgccctatttccgtttttat
gtgtccgagagccagcatgctaattctgtcataggcaaattgaatgccacagatcgtgat
gtcgaccaaaatttctccttttcattttctaagagctcaaatgtttcacaatatttcacc
atcgatgccgagactggaataattagaaacaaaaagagacttgacagagaggatcatctc
agatttgactttggtgttatcgtacgtgacccaaataattcacagtttaaagacaaagct
aatgtgacagtattcattaaggactggaatgataatactccgattgtcgtgtttccaagt
gacatcaacaacactgtgtatgtaccgtatcaccgagctgtcggaagcattattcttgtt
gtcagagcattcgacaatgacactgaagacaatgcaaaactgacttatacaattgaacag
ggcaatgacaaggaactctttttcttaaatctacattctggggagatgtatatagcaaaa
gaaatgcattcatcagatgctggtacatacaaacttgttgtagctgcacatgattcaggt
gaacctcagttgacatcgtatgcgaatctcaatatcatcctaacttcatcaaacggcact
gttcagtttattaatgataacgatgcccaccagtatattgccattgtaataacattagtg
tgtgttacatccgtgttgtgtgtggccgtcatcataacaatttgcataatcaagaaaatc
gacaaagaacgtcgacagacattgaaggagaagatgcagacccaagctgcttacactgtg
gacaatgttgaaacagtggatacaggagtttcaccaaataaaccatatgaaaatgaaata
gataaattgaaaaggaaaattaaacgagaacttagttttactgtcgacgactcccatgca
atggataccacagctgtcacaggagcatctttcgcaacattcaaaaatatgacttcatat
tcctcgatagaccagaaaaccttggctaatccgcaagcctgtagctctgtgctaactaac
aacacacatactcctgagcacacaaacttgaagatggcacattatgctgaaaagaagagg
gaaatacatagattagcatcggaaagaatacaagagcatgactgtgatactgctcattgg
ctgtctgaaactgaggttaaaaaggctgatgatgtaacaagcgagttgtctcagggggct
gaaacagatagtgggaggggatgtagtgaggaagactcccagagtaatcgtggatcaact
gtacctcatagtgactctgacgatgtgaaatcttacagcccgcgataccagcctggcaga
ggtacctacatcctgtcacgtgatactagtcatgacacaacacgaagcacaaattcacaa
cttagtctgaggtcagccatgagtccacgtcttggagaaattcaaggcaaccactacccc
cgtaacatcagctttagtgacgatagtgtgacagcaaataccactgtggacgcaaaacgt
aaaaagaagttacatggagacaatataccaatgcaaacatttgctaggagtgaaagaaat
gcttcccagacaccctatcatctaagggctatgaatcgtgttcgatttactggacatacg
cccaatcagggaacgtttattgatattaccgagagtacaccaggaatgaggtactctatt
ggtgatatggatgacgtgttgtgcgacagtgcagtgacaatgcacgaagacgatgaaagg
acaaccacgtcaggtagttacacgattaatgctgaagaattgtgcaatgaaatagacaat
ttattcttcaaagacatcattgtgtag
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integrated database retrieval system
