Haliotis rubra (blacklip abalone): 124276682
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Entry
124276682 CDS
T07967
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124276682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrj03041
]
124276682
Spliceosome [BR:
hrj03041
]
Complex A
U1 snRNP components
U1 related factors
124276682
Complex B
124276682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
124276682
NCBI-ProteinID:
XP_046568276
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MLPASSNQGGPPNPMMRPPFGMPPGNAPPPGFIPPPGMGGHGDMNQPPPGIPGYSGPPNL
PPPGFPPGMPPPMGMPPPMFPGGTSTSSPVISASSTTAGDSGDKSVWTEHKAPDGRTYYY
NNVTKQSSWEKPDDLKSDTERLLSQCPWKEYKSDNGKVYYHNSQTKESKWTKPKDLEELE
KKLADQKASSRKELPSTVSAPLPQSLLKQSSTPSSAIQQAMQATLASIELPPAAPGGVPP
AKEVKPEDSDSGSDVEEIKQPKKEVPLVFKNKKEAVEAFKALLKEKEVPSNCSWEQAMKL
IINDPRYGALKHLNEKKQAFNEYKTQRAKEEKDEQRLRAKQAKEDLEHFLCNNEKMNSTV
KYWKADNMFGDLEVWRAVNERDRRDLFDDVVHLLAKREKEEAKTLRKRNTKLFNEILDSM
PSLTYCTTWSEAQAMLLDNPRFTEDPDLQNMDKEDALVCFEDHIRMLEQEYDDERERERR
RMKRQQRKNRESFVVLLDELHDQGKLNSMSLWMDLYPIISQDLRFTMMLGQPGSTPLDLF
KFYVEDLKARFHDEKKIVKEILREKGFVVEVSTTYDDFASVISSDRRAVSLDTGNIKLTY
NSLIEKAEAREKERLKDEARKLKRLEGSFKTLLKQLSPPIDLDTKWDDIRSKLEHEAAFE
AITLESERMRLFREYVIAYEETCGHHHAKRKKSKKHKVKRSRSRSHSSDSEEEERRHKAK
KKKKSRSESRSPSPGTPSDREYEPERTSKKHKKKKKKKHISRSPSRSGYSSDEKHDHDRE
RERDRDRDRDRDRDRERERDRDRDRDRDRERDSKSSRRKKSPTPSSRKDKHDKHASKKRD
DDYDSTESELSEGELEKRRRLLLQQLESDL
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgctgccagcgtcttctaatcagggaggacccccaaacccgatgatgagaccacctttt
gggatgcctcctgggaatgccccacctccaggtttcatccccccacctggaatgggaggt
catggtgacatgaaccaacctccccccggaataccaggctacagtggacccccaaacctg
ccccctcctggtttcccccctggcatgccgcctccgatggggatgcccccacccatgttc
cctggaggcacttccacatcttcacctgtcatatctgcatcatcaaccactgcgggggac
agtggagacaagagtgtgtggaccgagcacaaggctcctgatggaagaacatactactac
aacaatgtcaccaagcagtccagctgggagaagccagatgacctcaagtcagacacagag
cggttgttgtcacagtgtccgtggaaggagtacaagtctgacaatggcaaggtgtactac
cataactctcagacaaaggagagcaagtggaccaagccaaaggacctagaggaattagaa
aaaaagttagcagaccagaaagccagtagtaggaaggagctgccgtctacagtgtctgcc
ccgctgccccagtccctgctgaaacagtcgtccaccccatcctcagccatccagcaggcc
atgcaagccaccctagcctccatagagctgcccccagcagccccagggggagtgccccca
gccaaggaggtcaagccagaggactccgatagtggctcggatgtagaggagataaaacag
cccaagaaagaagtccccttggttttcaaaaacaagaaggaggctgttgaggcattcaag
gctctactgaaggagaaggaggtgccatccaactgttcctgggaacaggccatgaaactc
atcatcaacgacccacgctatggagcgctcaaacatctcaatgagaagaaacaggcattc
aatgaatacaagacacagagggccaaggaggagaaggatgagcagcggctccgagccaaa
caggccaaggaagacctggaacatttcctctgtaacaacgagaagatgaactctacagtg
aaatactggaaagctgacaacatgtttggggacctggaggtgtggcgagctgtcaacgag
cgagaccgccgcgatctcttcgatgacgtagtgcatctccttgctaagcgggaaaaggag
gaagccaagacactcagaaaacgcaacactaaactgttcaatgaaatccttgacagcatg
ccaagtctgacatactgcactacatggtcagaagcacaagccatgctgcttgataacccc
cgctttacggaggacccagatctacagaatatggacaaggaagatgccctggtctgtttc
gaggaccacatccgcatgttggagcaggagtatgatgacgagcgggagcgggagagacgg
aggatgaagcgacagcaacgcaagaacagggagagctttgtggttctcctggatgagctg
cacgaccagggcaaactcaactccatgtctctgtggatggacctgtatcccatcattagt
caagacctgcgcttcaccatgatgcttggccagccaggctccacaccacttgacctcttc
aagttctatgttgaggacctcaaggcccgcttccatgatgagaagaagatagtgaaggag
atactccgggagaagggttttgtggtggaggtcagcacgacatatgatgactttgcatct
gtcatcagcagcgacaggcgggccgtcagcctcgacaccggcaacatcaagctcacctac
aatagtctgattgagaaggcagaggctcgggagaaggagagactgaaggatgaggccagg
aagctgaagcgactggagggatccttcaagactctgttgaagcaactgtctcctcccata
gatctggacaccaagtgggacgatataagatcaaagttagaacatgaggcagcgtttgag
gcaatcactctagagtctgaacgaatgcgactgtttagggagtatgtgattgcctatgag
gagacatgcgggcaccaccatgcaaagaggaagaaatcaaagaaacacaaggtcaagagg
tcaaggtcaagatcacattctagtgattcagaagaagaagaaagaagacacaaagctaaa
aagaagaagaaatcacggtctgagtcaaggtctcccagtcctggaacaccttcagataga
gagtatgagcctgaacggacatccaagaaacacaagaaaaagaagaagaagaagcacatc
tccagatctccatcacgttctggctattcaagtgacgagaaacatgaccatgatcgagag
agagaaagagatagagaccgggacagggaccgtgatcgcgatcgggaacgtgagcgggac
cgggacagggaccgggaccgagaccgagagagggatagtaagtcttctcgtcgcaagaaa
tctccaacaccctcctccaggaaagacaaacatgataagcatgcttccaagaagagagat
gatgactatgacagcacagagagtgagctgagtgaaggagagttggaaaagaggaggagg
ttgttactgcagcagctggagagtgacttataa
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