Haliotis rubra (blacklip abalone): 124277309
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Entry
124277309 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 16-1-like
KO
K17890
autophagy-related protein 16-1
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj04136
Autophagy - other
hrj04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124277309
04136 Autophagy - other
124277309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrj04131
]
124277309
03029 Mitochondrial biogenesis [BR:
hrj03029
]
124277309
Membrane trafficking [BR:
hrj04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
124277309
Others
Specific organelles associated proteins
Auto phagosome
124277309
Mitochondrial biogenesis [BR:
hrj03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124277309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_WDR19_1st
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
124277309
NCBI-ProteinID:
XP_046568916
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MAAHRAKDWKGNILIQLQGRNKKQTHAYVGLIQAHNKLVEIASSLKSRNVQLQVEAEKLK
EENLNLQVKVETGGGSGGGGEKTAHLEQKLYKLQEELTELHRKRGENAQQIIDLKNVLQE
KEKESQLKDAKLSDSEANILALKSAQRQLENTIIELEATNQMLKDEHQALQLAFTALEEK
YRRXMEENCELVQRWMDLKAKDADKLNEENDDFLKKRQAQLRKDLADAAKEPVSITETGK
LLLPGITPICLSASIPSKAQCVFDAHEGEVNAVQWSGTGRLFATGSADRKIKLWEIINGK
CEQKGILTGSNAGIMAIEFDIEDSLILGASNDFASRVWSVADQRLRHTLTGHSGKVLAAK
FLGDTNKVVSGSHDRTLKVWDLHSKACIKTIFAGSSCNDLVTLHGNNIISGHFDKRVRFW
DTRSDSSANEIMLQGRLTSLDLAPNRCSLLCCTRDDSVKIIDLRMNQVSARFGRHADGFK
VGCDWSRAVFSPDGSFAAAGSSDGGLYIWDVGKNKVEKLLKEHSHAIMACAWNPIGSSLV
SCERSRKVIYWARFLNSNT
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcacagagctaaagactggaaaggaaatattttgattcaactgcaagggcga
aataagaaacaaacccatgcatatgtaggcctgattcaagcacataacaagctggtagag
atcgcgtcttcactcaagtcccgcaatgttcagctacaagttgaggcagaaaaattaaag
gaagaaaaccttaatctccaggtgaaggttgaaactggaggtggcagcggtgggggtgga
gagaagacagctcatctggaacagaaactgtacaagttgcaggaggaactcacagaacta
caccggaagagaggggagaatgcgcagcagattattgacctcaagaatgttttacaagaa
aaagaaaaggaatcacaactaaaagatgcaaaattgtccgactctgaagctaacattctg
gccctgaagagtgcacagcggcagctggagaacaccatcattgagttggaggccaccaac
cagatgctgaaggatgagcaccaggcccttcagttggcgttcacagcgctggaggagaag
taccgtaggntaatggaagagaactgtgagctggtgcagcgatggatggatctcaaggcc
aaggacgcagacaaactcaacgaggagaatgacgacttcctcaagaaacgacaagcacag
ttgcggaaagatcttgccgatgctgcaaaggaacctgtttcaataacagaaaccgggaag
ctcctgcttccagggatcacccccatctgtctcagtgcctccataccaagcaaagcacag
tgtgtgtttgatgctcatgaaggggaggtaaatgctgtgcagtggagcggcactgggaga
ctgtttgcaactggtagtgccgataggaaaattaaactctgggaaattattaatggcaaa
tgtgaacagaagggcatcctgacgggtagcaacgctggcatcatggcgatagagttcgac
attgaagacagcttaattcttggtgcttctaatgactttgcaagtcgagtgtggtctgtg
gcagatcagcgattacggcacacactgacgggtcacagtggcaaggtgctggcagccaag
ttcctgggggacaccaacaaggttgtatcgggcagccatgacaggacgctcaaagtatgg
gaccttcacagcaaggcatgtataaagacaatatttgctgggtcaagttgcaatgacttg
gtgacgcttcatggcaacaatatcatcagtggtcacttcgacaagcgtgtccggttctgg
gacacacggtctgattcaagtgctaatgaaatcatgctgcagggaagactgacatcacta
gatctcgcgccaaaccgatgcagtttgctgtgctgcactcgagacgattccgtgaagatt
attgacctcaggatgaaccaggtgtcagcacgttttggtaggcatgcagatgggtttaag
gttggctgtgattggtccagggctgtgttcagccccgatggcagttttgccgctgctggg
tctagtgacggagggttgtatatctgggacgtcggcaagaacaaggtggagaaacttctc
aaagaacatagtcatgcaataatggcctgtgcgtggaatccgattggctcttccctggtc
agctgtgagcggtcaaggaaagtcatctactgggcccgatttctgaacagcaacacgtaa
DBGET
integrated database retrieval system
