Haliotis rubra (blacklip abalone): 124277343
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Entry
124277343 CDS
T07967
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrj04121
]
124277343
03036 Chromosome and associated proteins [BR:
hrj03036
]
124277343
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hrj03037
]
124277343
Enzymes [BR:
hrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124277343
Ubiquitin system [BR:
hrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124277343
UBL E3 ligases
124277343
Chromosome and associated proteins [BR:
hrj03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
124277343
Cilium and associated proteins [BR:
hrj03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
124277343
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
124277343
NCBI-ProteinID:
XP_046568948
LinkDB
All DBs
Position
Unknown
AA seq
1550 aa
AA seq
DB search
MADIAEVPKSDAPTRKSKRKAASKAMEELMPADGNKDDDKETDKPDSPSRSTSSPDPNCA
ICLSKLENKSFTDSCFHMFCFMCLLEWSKIKAECPLCKQPFKSIIHNVRSYDDYDQYHLE
VDAVGTFGSPSGRRFRYRTTLTQDHVFGFRPRRNSQHPDIGSRLPTTITTRQNWRRQREA
ATSEFRRRVYINGMRVVGIRDSSGRSRNISPEFFASNPATSHRLVPWLNRELNALLYNHE
EHVQFVLELIMDLIKRFPIQSEEFFQHVFPFISRHTRHFMHEFESFAKSPFCISSYDQKA
IYEQKPESVSDSDSVHSDGNDSDVMIVSPTYCPTSPSYVPNPARRRRDPGAVRRHHPRSE
ITPYSVSLRDLLEEDDDHVTSHSGWESPIAGPSWHLTPDTSNALAVPGSSSSQPGPIYQF
LNNIARRKRSKVKVEGATGINVDSETNLVESDSDSGSEVVCTGYDKPWQERTPVVVSTDT
EEERMIEKAEKLKRKKDQSRRPEDSKKSRRRSRSPSHSRSRRRRRSRSSSSRSNRRRSRS
CSTSRHRHRQRSTSSRYRSRSRSESRHQRYRSPSPSTRSRYRRRNRSRSLVYEDAFGYSR
RTTHSPETNSVIHSDSRRKKKKDRHRNSRYSDSSSRSRSKSSEIYHRSRHNKSKSSRRHR
RSRSSSVEVLTSRHRHKKHHKKHKRSRDSDKEKGASNNVQYKIVKDKTDGKSSKDPLLSI
TIKRDKSEDAPVVSSTVDAAPVVYPEIDIPDDIVIRTEPVSPQRTAETSNETVTQTSEES
TSSSQQVPISTSSTPLTHNQTGSSSQKKPATPKDGSDRKKEDSDSSTERVEVKRKSFKKH
PSGHKKSRRQLPRLPDPSTSTVTSSTSVSQVSDRRIPVLDAMAHLFQGLSNQGISQTPQS
DLRSVIPGMMSNFFDTNLLYGYPATDWSSLSNFLPRPPAQVTSSDHPVMVSSSDDSDVVL
ESVDNSATHAVSSSSNSLRDQGLQDLMSVNFMDRIPVLCDEIHSHKSIEVQEEINVVNSD
SDTIIEASSTGRPIASDAVMEVIDSDDEPKDPATPERTDTTSKNDESNDTDNVGKDLPGR
TGDTSQTEIISAALTEALPVQQDSNSNHTCSMNASSSTVNTSDLDTEKNEMVARDSCASE
VPDDSAMNSSNINESISQNVSTSGEESIDVGMELPPGCSADLVPVNDRNGTATDHRSEES
MDIDVVGDSDAGMRTDIAFGNFRDASSNGNGSQQPNASEQIDMVSQLMNSGQHSADSTGH
VEDCISSSPPEPYPLNVGESDKVSSHLPNNSPQQDNEQLSSDSRSSGSVEAEGNFEISSA
GNRTSARRDRSLDDGEVVSSENGDSLPGPAPQVIEGVSEISSDEDEVLVQRYPQVIADAS
DISSEESDFGEGTQPTSSSVSGSSKLNPQVIGDNTDSSDEGEISSDDDVQPQVIEDVSNV
SSESGDCSSRHDSENEITQFQTGRSTTVQTSSTASISRGLNGTTAVDSRLKNSDNDDSSS
GELSDNSDDEQVYDDISSLENFDSPASPVSQPLVTRDLEDSLSEGEIVSD
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atggctgacatagcagaggtgccgaagtcagatgctcctacccgaaagagtaagcggaag
gctgcaagtaaggcaatggaagaactcatgccagctgatggcaacaaagatgatgacaaa
gaaacggataagccagattctccatcccgatcaacctcatctccagaccctaactgtgcc
atctgtctcagcaagctggagaacaagtctttcactgacagctgcttccacatgttctgc
ttcatgtgtctcctggaatggtccaagatcaaggcagaatgcccattgtgcaaacagcct
ttcaagagtataattcacaatgtccgctcttatgatgactatgatcagtaccaccttgaa
gtcgacgcagtagggacctttggtagccccagcggacgccgttttcgttaccggacaacg
ttgacccaagatcatgttttcggtttccgcccaagaagaaattctcaacatcctgacatt
ggaagccgtttgcctaccacgattacgactcgtcaaaattggcgtcggcagagagaagct
gctacatcagaattcagacgacgtgtttacatcaacggaatgcgagtggtaggaattaga
gattcaagtggaagatctcggaatatatcacctgaattctttgcctcaaacccagctaca
tcccatcgcctagtgccctggttgaacagggagttgaatgctttgctctacaatcatgag
gaacatgtgcaatttgttctagaattgatcatggatttgattaaaaggttccctattcag
agtgaagaattctttcagcatgtgtttccatttattagcagacacacgagacacttcatg
catgaatttgaaagctttgcaaagtcccccttctgtatttcttcatatgatcaaaaggcc
atctatgagcaaaaaccagagtcagtatcagactcagattcggttcattctgatggaaat
gacagcgatgtgatgatagtgtccccaacttattgtccaacatccccgagttatgtccct
aatccagcaagacgaagacgtgaccctggggctgttagacgccaccatcctcggtcagag
ataactccgtactctgtcagtctcagggatttattggaggaagatgatgaccatgttaca
tcccactcaggctgggagtctcctattgctggtccttcttggcacttgactcctgatact
agcaatgccctagcagttcctggaagctccagttcacagccaggaccaatctatcaattt
cttaataacatagcacgaaggaagcggtcaaaagtgaaggtggaaggtgccactggaatt
aatgtagattctgagacgaatttggttgagtcggattcagattctggtagtgaagtggta
tgtactggctatgacaagccctggcaggaaaggactccagttgttgtttcaacagataca
gaagaagaacgtatgatagaaaaggcagagaagcttaagagaaagaaagaccagtccagg
agaccagaagattccaagaaaagtaggaggaggtcaagaagtccatctcattcaagatca
cgaagaaggagaaggtcgaggtcatcatcttctcgatctaatcgcagaagaagtagatcc
tgttccacgtcaagacatcgacatcgtcaaagatcgacatcttctcgatatcgcagtagg
tcaaggtcagagtcaagacatcaacgatataggtctccttcaccatccactaggtcaaga
tacagaagaaggaatagatccagatctcttgtttatgaggatgcatttggctactcaaga
cgtacaactcattctccggaaacaaacagtgtgatacattcagactctcgaaggaagaag
aaaaaggaccgtcacagaaactcaaggtacagtgactcctcatctaggtcaaggtcaaaa
tcctctgagatatatcacagaagtagacataataaatcaaaaagttccagaagacataga
cggtcaagaagttctagtgttgaagtcttaacaagcagacatagacacaaaaaacatcat
aagaagcataaaaggagccgagacagtgataaagagaaaggtgcttctaataatgtccag
tacaaaatagtgaaggataaaactgatggaaaatcttccaaagacccactcttgtctatt
accattaaaagagataagtctgaagatgcacctgttgtctcaagcactgttgatgcagct
ccggttgtttatcctgaaatagatatccctgatgatatagtcatcagaacagaaccagtt
agtcctcagcgtacagctgaaacatcaaatgagacagtgacacagacaagcgaggaaagc
acaagctcctcacagcaggttcccattagtacaagctccacacctctgacacacaaccag
acaggttcatcctctcagaagaaaccagcaactcctaaagatggctctgacagaaagaag
gaagattctgactcctctactgaacgtgtggaagtcaagagaaagtcattcaaaaaacat
ccatctggacacaagaaaagcaggaggcagttgccacgtcttcctgatccttccacaagc
actgttaccagtagcacaagtgtttcccaagtgtctgaccggaggatcccagtactggat
gctatggctcacttgttccaaggattaagtaaccagggcatttctcaaactccacagtct
gatttgagatcagttatccctgggatgatgtcgaacttctttgataccaatttgttgtat
ggatatcctgcaaccgattggtccagcttgtcaaacttcctaccaagacctcctgctcaa
gtgacctcatctgaccacccagtgatggtgagttccagtgatgatagtgatgttgtttta
gaatctgtagataacagcgccacacatgctgtgtcatctagcagcaattctctccgagac
cagggcctccaggacttgatgagtgtcaacttcatggacaggattcctgttctctgtgat
gagatacatagtcataagagtattgaagtccaagaggaaatcaacgttgtgaattcggat
agtgataccatcattgaggctagttctactggaagaccaatagcctctgatgctgtaatg
gaggtcattgacagtgatgatgaacctaaggatcccgccacaccggagaggacagataca
acttccaagaatgatgagtccaatgacacagacaatgttggaaaagacctccctggtagg
actggggacacttcacagacagaaataatttcagctgctttaacagaagcactacctgtt
caacaagattcaaattcaaatcatacatgctctatgaatgcaagctcctcaacagtaaac
acttctgatcttgacactgagaagaatgagatggttgctagggactcctgtgcatcagaa
gtcccagatgactctgcaatgaatagtagcaacatcaatgaaagtataagccaaaatgtg
tcaacctctggagaagaatccattgatgttggcatggagttaccaccaggatgttcagct
gacctagttccagttaatgatagaaatggaactgcaactgaccacagatcagaagaatca
atggacattgatgttgttggagattctgacgctggaatgagaactgacatagcatttggt
aatttcagagatgcttcttcaaatggaaatggttctcaacagcctaatgctagtgaacag
atagacatggtgtctcagttaatgaatagtggacaacacagtgctgacagtactggacat
gtagaagactgtatcagtagttctcctcctgagccttacccacttaatgtgggtgaaagt
gataaagtaagctcacatttgcctaacaattctccccagcaagacaatgagcagctgtca
tctgatagcaggtcatcaggttctgtggaagctgaaggcaactttgaaatcagttctgca
ggtaacagaaccagtgccagacgtgaccgttctcttgacgatggtgaagttgtctcatct
gaaaacggtgactcgctgccaggtcctgctcctcaggtgattgaaggtgtgagtgaaatt
tcctcggacgaggatgaggtgcttgttcagaggtatcctcaagtcattgcagatgctagt
gatatatcatcagaggagagtgatttcggggagggcactcaaccaacatctagttctgtg
tcaggatcgtctaaactaaatcctcaagtgattggggacaatacagattcttcggatgag
ggtgagatttcttcagatgatgatgtccagcctcaagtgatagaggatgtcagcaatgtg
tcatcagagtccggtgactgcagtagcagacatgattcagagaatgaaataacccagttt
caaactggcaggtcaaccactgttcaaacttcatcaacagcaagcatttcaagagggttg
aatgggaccacagctgtggattcaagacttaaaaatagtgataatgatgacagtagttcg
ggagaactaagtgataatagtgatgatgaacaggtttatgatgatatttcatcattagag
aactttgactcgccagcaagtccagtcagtcagcctttggtgacaagagacttagaggac
tcgctgagtgaaggagaaatagtatcagactga
DBGET
integrated database retrieval system
